Data search
Results for MligTC455_37929
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37929 | 172 | 3.58 | Mlig455_019823 | Neo: - Age: - |
Mlig455_019823 {REF} {Length: 3705} {RNA1509_31798} {RNA1310_37966.1} {RNA815_22783} |
Cumulative graph for MligTC455_37929
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.065 | 2.162 | 0.09652 | 0.66009 | |
| RegionR2 | 0.953 | 2.162 | 0.17039 | 0.51612 | |
| RegionR3 | -0.439 | 2.162 | 0.45186 | 0.96315 | |
| RegionR4 | -0.982 | 2.162 | 0.13566 | 0.37444 | |
| RegionR5 | -2.196 | 2.162 | 0.00027 | 0.00365 | |
| RegionR6 | -0.026 | 2.162 | 0.97263 | 1.00000 | |
| RegionR7 | -0.655 | 2.162 | 0.52090 | 1.00000 | |
| RegionR8 | 1.28 | 2.162 | 0.17494 | 0.75340 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.054 | 2.162 | 0.09838 | 0.81498 | |
| RegenerationR2 | -0.249 | 2.162 | 0.65197 | 0.93716 | |
| RegenerationR3 | -0.277 | 2.162 | 0.69852 | 0.94707 | |
| RegenerationR4 | -0.375 | 2.162 | 0.57818 | 0.90473 | |
| RegenerationR5 | 0.327 | 2.162 | 0.66575 | 0.93861 | |
| RegenerationR6 | -1.143 | 2.162 | 0.14552 | 0.46750 | |
| RegenerationBL | -0.918 | 2.162 | 0.38078 | 0.74929 | |
| RegenerationTP | 0.724 | 2.162 | 0.41203 | 0.83839 |
Genes with expression patterns similar to MligTC455_37929
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37929 | 172 | 3.58 | Mlig455_019823 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019823 {REF} {Length: 3705} {RNA1509_31798} {RNA1310_37966.1} {RNA815_22783} | |
| 2. | MligTC455_50604 | 357 | 7.44 | Mlig455_004187 | Neo: - Age: logFC(26M/2M)=-0.635 |
KLF1 | 1.684 | 0.960 | - | - | - | - | 0.724 | Mlig455_004187 {REF} {Length: 2786} {Pfam: Zinc-finger double domain [PF13465.8, score=38.4]; Zinc finger, C2H2 type [PF00096.28, score=36.9]; C2H2-type zinc ribbon [PF15909.7, score=27.4]; C2H2-type zinc finger [PF13894.8, score=23.7]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=130, Expect=2e-35]; ENSG00000102349, KLF8, Kruppel like factor 8, [Score=124, Expect=2e-33]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=125, Expect=2e-33]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=124, Expect=4e-33]; ENSMUSG00000041649, Klf8, Kruppel-like factor 8, [Score=121, Expect=3e-32]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=121, Expect=3e-33]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=120, Expect=7e-32]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=120, Expect=4e-31]; ENSMUSG00000025959, Klf7, Kruppel-like factor 7 (ubiquitous), [Score=119, Expect=6e-32]} {Dmel: FBgn0261705, CG42741, [Score=120, Expect=4e-32]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=115, Expect=8e-32]} {RNA1509_15595, RNA1509_15597} {RNA1310_30263, RNA1509_15595, RNA1509_15597} {RNA1509_15595, RNA1509_15597, RNA815_14612} |
| 3. | MligTC455_19085 | 95 | 1.98 | Mlig455_021540 | Neo: - Age: - |
0.975 | 0.975 | - | - | - | - | - | Mlig455_021540 {REF} {Length: 2045} {RNA1509_39251} {RNA1310_9860} {RNA815_3403} | |
| 4. | MligTC455_15782 | 201 | 4.19 | Mlig455_006365 | Neo: - Age: - |
0.973 | 0.973 | - | - | - | - | - | Mlig455_006365 {REF} {Length: 906} {NoTransDecoderORF} {RNA1310_47212.1} {RNA815_23096} | |
| 5. | MligTC455_48103 | 628 | 13.08 | Mlig455_057218 | Neo: - Age: Up-Up-Down |
RGS22 | 0.969 | 0.969 | - | - | - | - | - | Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1} |
| 6. | MligTC455_54121 | 71 | 1.47 | Mlig455_068380 | Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 3.953/0.00195 |
0.969 | 0.969 | - | - | - | - | - | Mlig455_068380 {REF} {Length: 2027} {RNA1509_41665, RNA1509_4855} {RNA1310_14711, RNA1509_41665} {RNA1509_41665, RNA815_5379} | |
| 7. | MligTC455_09657 | 25 | 0.52 | Mlig455_059925 | Neo: - Age: - |
0.967 | 0.967 | - | - | - | - | - | Mlig455_059925 {REF} {Length: 808} {Smed: dd_Smed_v6_16336_0_2, dd_Smed_v6_16336_0_2, [Score=69.7, Expect=6e-15]} {RNA1509_48613} {RNA1310_78016} {RNA815_131.1} | |
| 8. | MligTC455_24938 | 86 | 1.8 | Mlig455_002663 | Neo: - Age: logFC(26M/2M)=-0.427 |
ENPP5 | 0.961 | 0.961 | - | - | - | - | - | Mlig455_002663 {REF} {Length: 2243} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=196.3]; Sulfatase [PF00884.25, score=31.7]; Acetyltransferase (GNAT) family [PF00583.27, score=27.1]} {Human: ENSG00000112796, ENPP5, ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative), [Score=223, Expect=4e-65]; ENSG00000001561, ENPP4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [Score=216, Expect=5e-63]} {Mouse: ENSMUSG00000023961, Enpp4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [Score=214, Expect=3e-62]; ENSMUSG00000023960, Enpp5, ectonucleotide pyrophosphatase/phosphodiesterase 5, [Score=209, Expect=2e-60]} {Dmel: FBgn0039687, Naa40, N(alpha)-acetyltransferase 40, [Score=79.7, Expect=8e-17]} {Celegans: WBGene00007755, C27A7.3, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.3, [Score=149, Expect=1e-37]} {Smed: dd_Smed_v6_973_0_1, dd_Smed_v6_973_0_1, [RH, Score=290, Expect=5e-91]} {RNA1509_11646} {RNA1310_18120} {RNA815_3546.1} |
| 9. | MligTC455_28165 | 240 | 5 | Mlig455_045224 | Neo: - Age: - |
0.959 | 0.959 | - | - | - | - | - | Mlig455_045224 {REF} {Length: 2222} {TRANSSPLICED} {RNA1509_39965, RNA1509_56116} {RNA1310_18902, RNA1509_39965, RNA1509_56116} {RNA1509_39965, RNA1509_56116, RNA815_23283} | |
| 10. | MligTC455_53350 | 45 | 0.93 | Mlig455_068759 | Neo: - Age: Up-Down-Down |
0.957 | 0.957 | - | - | - | - | - | Mlig455_068759 {REF} {Length: 1092} {NoTransDecoderORF} {RNA1310_30525} {RNA815_58901} | |
| 11. | MligTC455_07212 | 41 | 0.85 | Mlig455_020125 | Neo: - Age: - |
0.956 | 0.956 | - | - | - | - | - | Mlig455_020125 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_32443, RNA1509_51241} {RNA1310_24373, RNA1509_32443, RNA1509_51241} {RNA1509_32443, RNA1509_51241, RNA815_57461} | |
| 12. | MligTC455_36303 | 725 | 15.11 | Mlig455_061149 | Neo: - Age: logFC(26M/2M)=-0.469 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_061149 {REF} {Length: 3996} {tRNA: Val(CAC),pseudo, score=22.1} {Pfam: Tenascin EGF domain [PF18720.3, score=23.1]; EGF-like domain [PF07974.15, score=21.5]} {RNA1509_3707} {RNA1310_2470} {RNA815_642.1} | |
| 13. | MligTC455_52844 | 80 | 1.66 | Mlig455_026050 | Neo: - Age: - |
PHF12 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_026050 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=63.1]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [RH, Score=96.7, Expect=3e-20]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [RH, Score=97.1, Expect=2e-20]} {Dmel: FBgn0029861, CG3815, [RH, Score=154, Expect=3e-39]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [RH, Score=79.3, Expect=4e-15]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [RH, Score=194, Expect=2e-53]} {RNA1509_54500, RNA1509_58497} {RNA1310_10137, RNA1509_58497} {RNA1509_58497, RNA815_5155} |
Berezikov Lab - 2020-2021 © ERIBA