TomoSeq data search

Data search

Results for MligTC455_37957

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37957

23

0.48

Mlig455_050269

Neo: -

Age: Up-Down-Down

CBFA2T2

Mlig455_050269 {REF} {Length: 2510} {Pfam: NHR1 homology to TAF [PF07531.16, score=75.1]; MYND finger [PF01753.20, score=32.4]} {Human: ENSG00000078699, CBFA2T2, CBFA2/RUNX1 translocation partner 2, [RH, Score=160, Expect=1e-42]} {Mouse: ENSMUSG00000038533, Cbfa2t2, CBFA2/RUNX1 translocation partner 2, [RH, Score=177, Expect=5e-49]} {Dmel: FBgn0005636, nvy, nervy, [RH, Score=152, Expect=2e-39]} {Celegans: WBGene00006385, taf-4, TAF (TBP-associated transcription factor) family, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_11134_0_8, dd_Smed_v6_11134_0_8, [Score=80.5, Expect=1e-16]} {RNA1509_59518} {RNA1310_51886} {RNA815_33947}

Cumulative graph for MligTC455_37957

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.241	0.659	0.99978	1.00000
RegionR2	-2.766	0.659	0.99982	1.00000
RegionR3	1.107	0.659	0.26071	0.80458
RegionR4	1.714	0.659	0.29978	0.61249
RegionR5	-3.089	0.659	0.99968	1.00000
RegionR6	1.51	0.659	0.25602	0.84116
RegionR7	3.105	0.659	0.36231	0.99767
RegionR8	-2.823	0.659	0.99979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.688	0.659	0.99998	1.00000
RegenerationR2	0.792	0.659	0.99996	1.00000
RegenerationR3	-3.159	0.659	0.31981	0.74828
RegenerationR4	-2.364	0.659	0.42934	0.83023
RegenerationR5	0.613	0.659	1.00000	1.00000
RegenerationR6	-3.005	0.659	0.56215	0.84694
RegenerationBL	-1.261	0.659	0.99988	1.00000
RegenerationTP	-2.766	0.659	0.99985	1.00000

Genes with expression patterns similar to MligTC455_37957

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37957	23	0.48	Mlig455_050269	Neo: - Age: Up-Down-Down	CBFA2T2	1	1.000	-	-	-	-	-	Mlig455_050269 {REF} {Length: 2510} {Pfam: NHR1 homology to TAF [PF07531.16, score=75.1]; MYND finger [PF01753.20, score=32.4]} {Human: ENSG00000078699, CBFA2T2, CBFA2/RUNX1 translocation partner 2, [RH, Score=160, Expect=1e-42]} {Mouse: ENSMUSG00000038533, Cbfa2t2, CBFA2/RUNX1 translocation partner 2, [RH, Score=177, Expect=5e-49]} {Dmel: FBgn0005636, nvy, nervy, [RH, Score=152, Expect=2e-39]} {Celegans: WBGene00006385, taf-4, TAF (TBP-associated transcription factor) family, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_11134_0_8, dd_Smed_v6_11134_0_8, [Score=80.5, Expect=1e-16]} {RNA1509_59518} {RNA1310_51886} {RNA815_33947}
2.	MligTC455_10883	95	1.99	Mlig455_059465	Neo: - Age: Down-Up-Down Region-enriched R7: 6.928/0.00088		0.987	0.987	-	-	-	-	-	Mlig455_059465 {REF} {Length: 1269} {RNA1310_144207}
3.	MligTC455_05713	40	0.83	Mlig455_060141	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.227	SVEP1	0.96	0.960	-	-	-	-	-	Mlig455_060141 {REF} {Length: 4520} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=163.6]; MAC/Perforin domain [PF01823.21, score=56.1]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=46.1]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=68.6, Expect=1e-10]; ENSG00000146197, SCUBE3, signal peptide, CUB domain and EGF like domain containing 3, [Score=66.6, Expect=4e-10]} {Mouse: ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=94.0, Expect=1e-18]} {Dmel: FBgn0031879, uif, uninflatable, [Score=77.0, Expect=2e-13]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=73.2, Expect=2e-12]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=99.8, Expect=1e-22]} {RNA1509_94} {RNA1310_1237.1} {RNA815_324.1}
4.	MligTC455_12691	608	12.67	Mlig455_023216	Neo: - Age: - Region-enriched R7: 6.467/0.00000 Region-enriched R8: 5.034/0.00808		0.958	0.958	-	-	-	-	-	Mlig455_023216 {REF} {Length: 1242} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=22.2]} {RNA1509_4408} {RNA1310_14584.1} {RNA815_44929}
5.	MligTC455_16526	125	2.61	Mlig455_026747, Mlig455_051738, Mlig455_051739, Mlig455_051760	Neo: - Age: Up-Down-Down	GABRG3	0.955	0.955	-	-	-	-	-	Mlig455_026747 {REF} {Length: 6317} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=31.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=25.1]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=57.8, Expect=4e-08]; ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=60.8, Expect=3e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [Score=517, Expect=2e-177]} {RNA1310_24908.1} {RNA815_12627} Mlig455_051738 {REF} {Length: 1364} {RNA1310_43175} {RNA815_39065} Mlig455_051739 {REF} {Length: 2058} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=32.3]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [Score=532, Expect=0.0]} {RNA1310_16047} {RNA815_12627} Mlig455_051760 {REF} {Length: 5962} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=32.2]} {Human: ENSG00000182256, GABRG3, gamma-aminobutyric acid type A receptor gamma3 subunit, [Score=72.8, Expect=5e-13]; ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=69.7, Expect=5e-12]} {Mouse: ENSMUSG00000055026, Gabrg3, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3, [Score=77.0, Expect=2e-14]} {Dmel: FBgn0030707, CG8916, [Score=60.5, Expect=2e-09]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_10171_0_1, dd_Smed_v6_10171_0_1, [RH, Score=573, Expect=0.0]} {RNA1310_24908.1} {RNA815_12627}
6.	MligTC455_11873	182	3.8	Mlig455_064533	Neo: - Age: - Region-enriched R7: 6.862/0.00000 Region-enriched R8: 5.801/0.00001 Region-enriched R6: 4.321/0.00002	TBX20	0.953	0.953	-	-	-	-	-	Mlig455_064533 {REF} {Length: 2157} {Pfam: T-box [PF00907.24, score=229.4]} {Human: ENSG00000164532, TBX20, T-box 20, [Score=259, Expect=6e-82]} {Mouse: ENSMUSG00000031965, Tbx20, T-box 20, [Score=259, Expect=3e-84]} {Dmel: FBgn0261963, mid, midline, [Score=254, Expect=1e-78]} {Celegans: WBGene00003106, mab-9, T-box protein 12, [Score=228, Expect=2e-71]} {Smed: dd_Smed_v6_19890_0_1, dd_Smed_v6_19890_0_1, [Score=259, Expect=6e-81]} {RNA1509_38966} {RNA1310_30620} {RNA815_7293.1}
7.	MligTC455_10964	86	1.8	Mlig455_043852	Neo: - Age: - Region-enriched R7: 4.988/0.02119		0.952	0.952	-	-	-	-	-	Mlig455_043852 {REF} {Length: 505} {NoTransDecoderORF} {RNA1310_115491} {RNA815_57092}
8.	MligTC455_27611	40	0.83	Mlig455_024679	Neo: - Age: Up-Down-Up	KLRK1	0.951	0.951	-	-	-	-	-	Mlig455_024679 {REF} {Length: 11464} {Pfam: F5/8 type C domain [PF00754.27, score=65.2]; Lectin C-type domain [PF00059.23, score=64.2]; Kringle domain [PF00051.20, score=30.1]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=24.6]} {Human: ENSG00000213809, KLRK1, killer cell lectin like receptor K1, [RH, Score=55.1, Expect=4e-07]} {Mouse: ENSMUSG00000030149, Klrk1, killer cell lectin-like receptor subfamily K, member 1, [RH, Score=51.6, Expect=5e-06]} {RNA1509_14205} {RNA1310_58265} {RNA815_33974}

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