TomoSeq data search

Data search

Results for MligTC455_37963

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37963

184

3.84

Mlig455_065234

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.568

Mlig455_065234 {REF} {Length: 1702} {RNA1509_46647} {RNA1310_18706, RNA1509_46647} {RNA1509_46647, RNA815_11815}

Cumulative graph for MligTC455_37963

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.767	2.55	0.33209	0.97806
RegionR2	0.704	2.55	0.51892	0.89385
RegionR3	0.49	2.55	0.61246	1.00000
RegionR4	0.362	2.55	0.70428	0.99209
RegionR5	0.308	2.55	0.71395	1.00000
RegionR6	0.236	2.55	0.75787	1.00000
RegionR7	1.488	2.55	0.14090	0.70152
RegionR8	1.18	2.55	0.35652	0.99126

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.336	2.55	0.30358	0.99823
RegenerationR2	0.176	2.55	0.78205	0.98390
RegenerationR3	-0.499	2.55	0.50077	0.85740
RegenerationR4	0.241	2.55	0.75788	0.97209
RegenerationR5	-0.581	2.55	0.41508	0.80844
RegenerationR6	-0.426	2.55	0.58590	0.86142
RegenerationBL	-0.88	2.55	0.38135	0.74975
RegenerationTP	-1.68	2.55	0.10271	0.49752

Genes with expression patterns similar to MligTC455_37963

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37963	184	3.84	Mlig455_065234	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.568		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065234 {REF} {Length: 1702} {RNA1509_46647} {RNA1310_18706, RNA1509_46647} {RNA1509_46647, RNA815_11815}
2.	MligTC455_13219	500	10.42	Mlig455_035258	Neo: - Age: -	CTU1	0.968	-	-	-	0.968	-	-	Mlig455_035258 {REF} {Length: 2034} {TRANSSPLICED} {Pfam: Zinc-ribbon [PF16503.7, score=56.0]; PP-loop family [PF01171.22, score=51.6]} {Human: ENSG00000142544, CTU1, cytosolic thiouridylase subunit 1, [RH, Score=313, Expect=6e-105]} {Mouse: ENSMUSG00000038888, Ctu1, cytosolic thiouridylase subunit 1, [RH, Score=314, Expect=3e-104]} {Dmel: FBgn0033375, CG8078, [RH, Score=411, Expect=8e-144]} {Celegans: WBGene00017928, tut-1, Cytoplasmic tRNA 2-thiolation protein 1, [RH, Score=388, Expect=3e-134]} {Smed: dd_Smed_v6_9291_0_1, dd_Smed_v6_9291_0_1, [RH, Score=409, Expect=7e-143]} {RNA1509_16428} {RNA1310_13891.2} {RNA815_8994.1}
3.	MligTC455_02758	129	2.69	Mlig455_001648, Mlig455_001715	Neo: - Age: logFC(26M/2M)=-0.349		0.967	-	-	-	-	-	0.967	Mlig455_001648 {REF} {Length: 2010} {Pfam: Death domain [PF00531.24, score=20.4]} {RNA1509_32212, RNA1509_57415} {RNA1310_29260, RNA1509_32212, RNA1509_57415} {RNA1509_32212, RNA1509_57415, RNA815_17490} Mlig455_001715 {REF} {Length: 1221} {RNA1509_32212} {RNA1310_56586} {RNA815_40737.1}
4.	MligTC455_39388	350	7.3	Mlig455_045762	Neo: Int S/G2/M Age: -	DCUN1D3	0.955	-	-	-	0.955	-	-	Mlig455_045762 {REF} {Length: 5466} {TRANSSPLICED} {Pfam: Cullin binding [PF03556.17, score=101.6]} {Human: ENSG00000188215, DCUN1D3, defective in cullin neddylation 1 domain containing 3, [RH, Score=155, Expect=7e-45]} {Mouse: ENSMUSG00000048787, Dcun1d3, DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae), [RH, Score=155, Expect=9e-45]} {Dmel: FBgn0033784, SCCRO3, Squamous cell carcinoma-related oncogene 3, [Score=139, Expect=1e-38]} {Celegans: WBGene00010428, dcn-1, Defective in cullin neddylation protein 1, [Score=101, Expect=2e-25]} {Smed: dd_Smed_v6_3227_0_1, dd_Smed_v6_3227_0_1, [Score=85.5, Expect=3e-19]} {RNA1509_31859} {RNA1310_26103} {RNA815_28933}
5.	Mlig999005.1						0.953	-	-	-	-	-	0.953
6.	MligTC455_22541	36	0.75	Mlig455_022973	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_022973 {REF} {Length: 1356} {RNA1509_49656} {RNA1310_58924} {RNA815_37820}

Berezikov Lab - 2020-2021 © ERIBA