Data search
Results for MligTC455_37982
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37982 | 631 | 13.14 | Mlig455_062287 | Neo: - Age: - |
GTPBP1 | Mlig455_062287 {REF} {Length: 4369} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=79.5]; Elongation factor Tu domain 2 [PF03144.27, score=26.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000100226, GTPBP1, GTP binding protein 1, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000042535, Gtpbp1, GTP binding protein 1, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0027836, Dgp-1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00000480, cgp-1, GTP-binding protein cgp-1, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_2780_0_1, dd_Smed_v6_2780_0_1, [RH, Score=761, Expect=0.0]} {RNA1509_4913} {RNA1310_5452.1} {RNA815_2929} |
Cumulative graph for MligTC455_37982
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.153 | 4.064 | 0.02913 | 0.44165 | |
| RegionR2 | 1.287 | 4.064 | 0.07647 | 0.33797 | |
| RegionR3 | 0.8 | 4.064 | 0.28164 | 0.82523 | |
| RegionR4 | 0.947 | 4.064 | 0.23156 | 0.52486 | |
| RegionR5 | 0.79 | 4.064 | 0.27566 | 0.60206 | |
| RegionR6 | 0.968 | 4.064 | 0.16952 | 0.72641 | |
| RegionR7 | 0.606 | 4.064 | 0.49802 | 1.00000 | |
| RegionR8 | 1.756 | 4.064 | 0.01279 | 0.21772 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.831 | 4.064 | 0.13054 | 0.86315 | |
| RegenerationR2 | -0.476 | 4.064 | 0.18539 | 0.62769 | |
| RegenerationR3 | 0.115 | 4.064 | 0.77402 | 0.97295 | |
| RegenerationR4 | -0.348 | 4.064 | 0.41268 | 0.82230 | |
| RegenerationR5 | 0.323 | 4.064 | 0.36624 | 0.77695 | |
| RegenerationR6 | -0.449 | 4.064 | 0.29369 | 0.64415 | |
| RegenerationBL | 0.196 | 4.064 | 0.69762 | 1.00000 | |
| RegenerationTP | -0.472 | 4.064 | 0.37601 | 0.81211 |
Genes with expression patterns similar to MligTC455_37982
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37982 | 631 | 13.14 | Mlig455_062287 | Neo: - Age: - |
GTPBP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062287 {REF} {Length: 4369} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=79.5]; Elongation factor Tu domain 2 [PF03144.27, score=26.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000100226, GTPBP1, GTP binding protein 1, [RH, Score=726, Expect=0.0]} {Mouse: ENSMUSG00000042535, Gtpbp1, GTP binding protein 1, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0027836, Dgp-1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00000480, cgp-1, GTP-binding protein cgp-1, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_2780_0_1, dd_Smed_v6_2780_0_1, [RH, Score=761, Expect=0.0]} {RNA1509_4913} {RNA1310_5452.1} {RNA815_2929} |
| 2. | MligTC455_37981 | 573 | 11.94 | Mlig455_049381 | Neo: - Age: - |
GTPBP1 | 3.697 | 0.983 | 0.970 | - | 0.770 | - | 0.974 | Mlig455_049381 {REF} {Length: 4340} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=79.5]; Elongation factor Tu domain 2 [PF03144.27, score=26.6]; Elongation factor Tu C-terminal domain [PF03143.19, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.4]} {Human: ENSG00000100226, GTPBP1, GTP binding protein 1, [RH, Score=727, Expect=0.0]} {Mouse: ENSMUSG00000042535, Gtpbp1, GTP binding protein 1, [RH, Score=728, Expect=0.0]} {Dmel: FBgn0027836, Dgp-1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00000480, cgp-1, GTP-binding protein cgp-1, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_2780_0_1, dd_Smed_v6_2780_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_20206, RNA1509_4913} {RNA1310_5452.1, RNA1509_20206, RNA1509_4913} {RNA1509_20206, RNA1509_4913, RNA815_2929} |
| 3. | MligTC455_36534 | 927 | 19.3 | Mlig455_027552 | Neo: - Age: - |
DCTN2 | 1.793 | - | - | - | 0.835 | - | 0.958 | Mlig455_027552 {REF} {Length: 5008} {Pfam: Dynamitin [PF04912.16, score=296.1]} {Human: ENSG00000175203, DCTN2, dynactin subunit 2, [RH, Score=221, Expect=6e-68]} {Mouse: ENSMUSG00000025410, Dctn2, dynactin 2, [RH, Score=231, Expect=1e-71]} {Dmel: FBgn0021825, DCTN2-p50, Dynactin 2, p50 subunit, [RH, Score=139, Expect=4e-37]} {Celegans: WBGene00001018, dnc-2, Probable dynactin subunit 2, [RH, Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_3787_0_5, dd_Smed_v6_3787_0_5, [RH, Score=152, Expect=7e-42]} {RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583} {RNA1310_18975, RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583} {RNA1509_11264, RNA1509_24643, RNA1509_39970, RNA1509_40361, RNA1509_52084, RNA1509_52932, RNA1509_54583, RNA815_426} |
| 4. | MligTC455_22986 | 277 | 5.78 | Mlig455_057175 | Neo: - Age: - |
SPOP | 1.668 | - | - | - | 0.710 | - | 0.958 | Mlig455_057175 {REF} {Length: 3540} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=94.1]} {Human: ENSG00000121067, SPOP, speckle type BTB/POZ protein, [Score=144, Expect=3e-39]; ENSG00000144228, SPOPL, speckle type BTB/POZ protein like, [Score=142, Expect=2e-38]} {Mouse: ENSMUSG00000094084, Tdpoz1, TD and POZ domain containing 1, [Score=157, Expect=3e-44]; ENSMUSG00000095822, Gm9117, predicted pseudogene 9117, [Score=155, Expect=2e-43]; ENSMUSG00000094328, Gm9125, predicted gene 9125, [Score=155, Expect=2e-43]} {Dmel: FBgn0264493, rdx, roadkill, [Score=140, Expect=4e-38]} {Celegans: WBGene00011815, bath-43, BTB and MATH domain-containing protein 43, [Score=157, Expect=2e-44]} {Smed: dd_Smed_v6_7639_0_1, dd_Smed_v6_7639_0_1, [Score=88.6, Expect=9e-21]} {RNA1509_14408} {RNA1310_14329.1} {RNA815_7001} |
| 5. | MligTC455_26030 | 360 | 7.49 | Mlig455_026422, Mlig455_044775, Mlig455_053673, Mlig455_068706 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 3.606 Regeneration-enriched BL: 3.606 |
ATF7IP2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_026422 {REF} {Length: 2772} {Pfam: Fibronectin-III type domain [PF16794.7, score=50.3]} {Human: ENSG00000166669, ATF7IP2, activating transcription factor 7 interacting protein 2, [Score=50.1, Expect=6e-06]} {Mouse: ENSMUSG00000039200, Atf7ip2, activating transcription factor 7 interacting protein 2, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_9361_0_1, dd_Smed_v6_9361_0_1, [Score=48.9, Expect=3e-06]} {RNA1509_57678} {RNA1310_15251.1} {RNA815_15445} Mlig455_044775 {REF} {Length: 2769} {Pfam: Fibronectin-III type domain [PF16794.7, score=50.3]} {Human: ENSG00000166669, ATF7IP2, activating transcription factor 7 interacting protein 2, [Score=50.1, Expect=6e-06]} {Mouse: ENSMUSG00000039200, Atf7ip2, activating transcription factor 7 interacting protein 2, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_9361_0_1, dd_Smed_v6_9361_0_1, [Score=48.9, Expect=3e-06]} {RNA1509_57678} {RNA1310_15251.1, RNA1509_57678} {RNA1509_57678, RNA815_15445} Mlig455_053673 {REF} {Length: 2279} {Pfam: Fibronectin-III type domain [PF16794.7, score=52.2]} {Human: ENSG00000166669, ATF7IP2, activating transcription factor 7 interacting protein 2, [Score=45.4, Expect=3e-06]} {Mouse: ENSMUSG00000039200, Atf7ip2, activating transcription factor 7 interacting protein 2, [Score=45.4, Expect=2e-06]} {Smed: dd_Smed_v6_9361_0_1, dd_Smed_v6_9361_0_1, [Score=45.1, Expect=1e-06]} {RNA1509_57678} {RNA1310_23373} {RNA815_26573} Mlig455_068706 {REF} {Length: 2711} {TRANSSPLICED} {Pfam: Fibronectin-III type domain [PF16794.7, score=50.5]} {Human: ENSG00000166669, ATF7IP2, activating transcription factor 7 interacting protein 2, [Score=50.1, Expect=6e-06]} {Mouse: ENSMUSG00000039200, Atf7ip2, activating transcription factor 7 interacting protein 2, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_9361_0_1, dd_Smed_v6_9361_0_1, [Score=48.5, Expect=4e-06]} {RNA1509_29031} {RNA1310_15251.2, RNA1509_29031} {RNA1509_29031, RNA815_15445} |
| 6. | MligTC455_15994 | 351 | 7.31 | Mlig455_070682 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.545/0.04687 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_070682 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Cell division protein ZapB [PF06005.14, score=35.3]; Filament-like plant protein, long coiled-coil [PF05911.13, score=33.4]; Domain of unknown function (DUF4201) [PF13870.8, score=23.3]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=23.1]; JNK_SAPK-associated protein-1 [PF09744.11, score=22.3]; Afadin- and alpha -actinin-Binding [PF11559.10, score=19.1]} {RNA1509_55898, RNA1509_56437, RNA1509_59987} {RNA1310_19134, RNA1509_55898, RNA1509_59987} {RNA1509_55898, RNA1509_59987, RNA815_8888} | |
| 7. | MligTC455_33867 | 340 | 7.08 | Mlig455_005075 | Neo: - Age: - |
MED13 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_005075 {REF} {Length: 6887} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=212, Expect=2e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=202, Expect=1e-51]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=9e-51]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887} {RNA815_2444} |
| 8. | MligTC455_48837 | 618 | 12.88 | Mlig455_002902 | Neo: - Age: - |
TNKS | 0.953 | - | - | - | - | - | 0.953 | Mlig455_002902 {REF} {Length: 5879} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=22.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=334.9]; Ankyrin repeats (3 copies) [PF12796.9, score=331.2]; Ankyrin repeats (many copies) [PF13857.8, score=329.1]; Ankyrin repeat [PF00023.32, score=306.1]; Ankyrin repeat [PF13606.8, score=272.8]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=86.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=53.4]; SAM domain (Sterile alpha motif) [PF07647.19, score=50.3]} {Human: ENSG00000173273, TNKS, tankyrase, [RH, Score=1293, Expect=0.0]; ENSG00000285372, AC270292.3, tankyrase, [RH, Score=1244, Expect=0.0]; ENSG00000107854, TNKS2, tankyrase 2, [RH, Score=1236, Expect=0.0]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [RH, Score=1251, Expect=0.0]; ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [RH, Score=1236, Expect=0.0]} {Dmel: FBgn0027508, Tnks, tankyrase, [RH, Score=1292, Expect=0.0]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=254, Expect=2e-69]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [RH, Score=1287, Expect=0.0]} {RNA1509_36893, RNA1509_4150, RNA1509_47489} {RNA1310_2136, RNA1509_36893, RNA1509_4150, RNA1509_47489} {RNA1509_36893, RNA1509_4150, RNA1509_47489, RNA815_1701} |
| 9. | MligTC455_34144 | 457 | 9.51 | Mlig455_016401 | Neo: - Age: - Regeneration-upregulated BL: 2.357 Regeneration-enriched BL: 2.357 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_016401 {REF} {Length: 3321} {TRANSSPLICED} {RNA1509_40576} {RNA1310_8602, RNA1509_40576} {RNA1509_40576, RNA815_10261} |
Berezikov Lab - 2020-2021 © ERIBA