Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_38011 | 1117 | 23.27 | Mlig455_015023, Mlig455_038427, Mlig455_038633 | Neo: - Age: - Region-enriched R4: 1.340/0.04321 |
SRGAP1 | Mlig455_015023 {REF} {Length: 7279} {Pfam: RhoGAP domain [PF00620.29, score=141.7]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=39.5]; Variant SH3 domain [PF14604.8, score=37.4]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=452, Expect=1e-141]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=444, Expect=2e-138]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=444, Expect=2e-138]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=444, Expect=2e-138]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=424, Expect=3e-131]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=72.4, Expect=8e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=333, Expect=4e-98]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=377, Expect=9e-114]} {RNA1509_42351, RNA1509_52569} {RNA1310_3232.1, RNA1509_42351, RNA1509_52569} {RNA1509_42351, RNA1509_52569, RNA815_5655.1} Mlig455_038427 {REF} {Length: 7513} {Pfam: RhoGAP domain [PF00620.29, score=141.7]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.9]; Variant SH3 domain [PF14604.8, score=37.4]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=451, Expect=6e-141]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=442, Expect=1e-137]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=443, Expect=5e-138]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=442, Expect=6e-138]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=422, Expect=2e-130]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=72.4, Expect=7e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=333, Expect=6e-98]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=378, Expect=4e-114]} {RNA1509_52569} {RNA1310_3232.1} {RNA815_5655.1} Mlig455_038633 {REF} {Length: 7108} {Pfam: RhoGAP domain [PF00620.29, score=140.8]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=39.5]; Variant SH3 domain [PF14604.8, score=37.5]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=448, Expect=7e-140]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=437, Expect=1e-135]} {Mouse: ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=439, Expect=1e-136]; ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=437, Expect=5e-136]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=421, Expect=7e-130]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=68.9, Expect=9e-12]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [RH, Score=328, Expect=4e-96]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=375, Expect=7e-113]} {RNA1509_7531} {RNA1310_3232.1, RNA1509_7531} {RNA1509_7531, RNA815_5655.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.789 | 4.665 | 0.11582 | 0.70351 | |
RegionR2 | 0.549 | 4.665 | 0.27391 | 0.65883 | |
RegionR3 | 0.465 | 4.665 | 0.28008 | 0.82412 | |
RegionR4 | 1.34 | 4.665 | 0.00625 | 0.04321 | |
RegionR5 | 0.763 | 4.665 | 0.05715 | 0.20597 | |
RegionR6 | 0.985 | 4.665 | 0.01558 | 0.21896 | |
RegionR7 | -1.087 | 4.665 | 0.15797 | 0.73412 | |
RegionR8 | -0.226 | 4.665 | 0.75592 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 3.258 | 4.665 | 0.10490 | 0.82655 | |
RegenerationR2 | 0.175 | 4.665 | 0.61845 | 0.92277 | |
RegenerationR3 | 0.696 | 4.665 | 0.08166 | 0.46909 | |
RegenerationR4 | 0.049 | 4.665 | 0.90876 | 1.00000 | |
RegenerationR5 | 0.509 | 4.665 | 0.17614 | 0.60542 | |
RegenerationR6 | -0.127 | 4.665 | 0.74858 | 0.95155 | |
RegenerationBL | 1.386 | 4.665 | 0.00184 | 0.03413 | |
RegenerationTP | 0.946 | 4.665 | 0.08725 | 0.46621 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_38011 | 1117 | 23.27 | Mlig455_015023, Mlig455_038427, Mlig455_038633 | Neo: - Age: - Region-enriched R4: 1.340/0.04321 |
SRGAP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015023 {REF} {Length: 7279} {Pfam: RhoGAP domain [PF00620.29, score=141.7]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=39.5]; Variant SH3 domain [PF14604.8, score=37.4]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=452, Expect=1e-141]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=444, Expect=2e-138]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=444, Expect=2e-138]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=444, Expect=2e-138]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=424, Expect=3e-131]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=72.4, Expect=8e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=333, Expect=4e-98]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=377, Expect=9e-114]} {RNA1509_42351, RNA1509_52569} {RNA1310_3232.1, RNA1509_42351, RNA1509_52569} {RNA1509_42351, RNA1509_52569, RNA815_5655.1} Mlig455_038427 {REF} {Length: 7513} {Pfam: RhoGAP domain [PF00620.29, score=141.7]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=37.9]; Variant SH3 domain [PF14604.8, score=37.4]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=451, Expect=6e-141]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=442, Expect=1e-137]} {Mouse: ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=443, Expect=5e-138]; ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=442, Expect=6e-138]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=422, Expect=2e-130]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=72.4, Expect=7e-13]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [Score=333, Expect=6e-98]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=378, Expect=4e-114]} {RNA1509_52569} {RNA1310_3232.1} {RNA815_5655.1} Mlig455_038633 {REF} {Length: 7108} {Pfam: RhoGAP domain [PF00620.29, score=140.8]; SH3 domain [PF00018.30, score=43.9]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=39.5]; Variant SH3 domain [PF14604.8, score=37.5]; Variant SH3 domain [PF07653.19, score=19.8]} {Human: ENSG00000196935, SRGAP1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=448, Expect=7e-140]; ENSG00000196220, SRGAP3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=437, Expect=1e-135]} {Mouse: ENSMUSG00000020121, Srgap1, SLIT-ROBO Rho GTPase activating protein 1, [RH, Score=439, Expect=1e-136]; ENSMUSG00000030257, Srgap3, SLIT-ROBO Rho GTPase activating protein 3, [RH, Score=437, Expect=5e-136]; ENSMUSG00000026425, Srgap2, SLIT-ROBO Rho GTPase activating protein 2, [RH, Score=421, Expect=7e-130]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=68.9, Expect=9e-12]} {Celegans: WBGene00006406, srgp-1, Slit-Robo GAP homolog, [RH, Score=328, Expect=4e-96]} {Smed: dd_Smed_v6_5482_0_1, dd_Smed_v6_5482_0_1, [RH, Score=375, Expect=7e-113]} {RNA1509_7531} {RNA1310_3232.1, RNA1509_7531} {RNA1509_7531, RNA815_5655.1} |
2. | MligTC455_45213 | 458 | 9.54 | Mlig455_025798 | Neo: - Age: Up-Down-Down |
PARP1 | 1.71 | - | - | - | - | 0.758 | 0.952 | Mlig455_025798 {REF} {Length: 10432} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=238.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.8]; Ankyrin repeat [PF00023.32, score=149.8]; Ankyrin repeats (many copies) [PF13857.8, score=145.5]; Ankyrin repeat [PF13606.8, score=141.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.2]; WGR domain [PF05406.17, score=66.7]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=51.9]} {Human: ENSG00000143799, PARP1, poly(ADP-ribose) polymerase 1, [Score=150, Expect=1e-35]} {Mouse: ENSMUSG00000026496, Parp1, poly (ADP-ribose) polymerase family, member 1, [Score=147, Expect=9e-35]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=129, Expect=2e-29]} {Celegans: WBGene00004053, tank-1, Tankyrase-like protein, [RH, Score=188, Expect=4e-47]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [Score=131, Expect=3e-30]} {RNA1509_5179, RNA1509_5717} {RNA1310_174.1, RNA1509_5179, RNA1509_5717} {RNA1509_5179, RNA1509_5717, RNA815_1091} |
3. | MligTC455_48084 | 804 | 16.75 | Mlig455_041334, Mlig455_056209, Mlig455_056219 | Neo: - Age: Up-Down-Down |
CHPT1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_041334 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=59.2]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [Score=227, Expect=7e-71]} {Mouse: ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [Score=226, Expect=7e-71]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [Score=212, Expect=2e-65]} {Celegans: WBGene00009057, cept-1, Choline/EthanolaminePhosphoTransferase, [Score=192, Expect=5e-58]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [Score=203, Expect=5e-62]} {RNA1509_37840} {RNA1310_15138} {RNA815_21435} Mlig455_056209 {REF} {Length: 3819} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=59.2]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [Score=243, Expect=1e-76]} {Mouse: ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [Score=243, Expect=9e-77]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [Score=223, Expect=5e-69]} {Celegans: WBGene00009057, cept-1, Choline/EthanolaminePhosphoTransferase, [Score=201, Expect=4e-61]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [Score=219, Expect=2e-67]} {RNA1509_37840, RNA1509_48200} {RNA1310_15138, RNA1509_37840, RNA1509_48200} {RNA1509_37840, RNA1509_48200, RNA815_21435} Mlig455_056219 {REF} {Length: 3503} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=43.2]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [Score=191, Expect=3e-57]} {Mouse: ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [Score=191, Expect=1e-57]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [Score=178, Expect=1e-52]} {Celegans: WBGene00009057, cept-1, Choline/EthanolaminePhosphoTransferase, [Score=162, Expect=9e-47]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [Score=174, Expect=3e-51]} {RNA1509_37840} {RNA1310_15138} {RNA815_21435} |
4. | MligTC455_09337 | 505 | 10.51 | Mlig455_037267 | Neo: - Age: Up-Down-Down |
ZNF692 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_037267 {REF} {Length: 5634} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=58.7]; C2H2-type zinc finger [PF13894.8, score=54.4]; Zinc-finger double domain [PF13465.8, score=41.9]; C2H2-type zinc-finger domain [PF13909.8, score=27.4]} {Human: ENSG00000171163, ZNF692, zinc finger protein 692, [RH, Score=106, Expect=2e-23]} {Mouse: ENSMUSG00000037243, Zfp692, zinc finger protein 692, [RH, Score=107, Expect=1e-23]} {Dmel: FBgn0032295, CG12299, [Score=102, Expect=5e-22]} {Celegans: WBGene00001324, eor-1, EOR-1, [Score=86.7, Expect=4e-17]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [RH, Score=227, Expect=9e-63]} {RNA1509_9440} {RNA1310_11589} {RNA815_12610} |
5. | MligTC455_31640 | 655 | 13.64 | Mlig455_010707 | Neo: - Age: logFC(26M/2M)=0.274 |
PUM2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_010707 {REF} {Length: 5114} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=278.8]; CPL (NUC119) domain [PF08144.13, score=22.5]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=538, Expect=7e-178]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=530, Expect=2e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=538, Expect=1e-177]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=531, Expect=5e-176]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=531, Expect=5e-176]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=520, Expect=3e-166]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=403, Expect=5e-130]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [RH, Score=513, Expect=1e-169]} {RNA1509_3045, RNA1509_32128, RNA1509_37493, RNA1509_41992, RNA1509_42182, RNA1509_46747} {RNA1310_2069.1, RNA1509_3045, RNA1509_32128, RNA1509_37493, RNA1509_41992, RNA1509_42182, RNA1509_46747} {RNA1509_3045, RNA1509_32128, RNA1509_37493, RNA1509_41992, RNA1509_42182, RNA1509_46747, RNA815_3734} |
6. | MligTC455_28448 | 313 | 6.52 | Mlig455_034262, Mlig455_067299 | Neo: - Age: Up-Down-Down |
HYDIN | 0.952 | - | - | - | 0.952 | - | - | Mlig455_034262 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Family of unknown function (DUF6195) [PF19695.1, score=28.4]; Domain of unknown function (DUF5593) [PF18007.3, score=21.2]} {RNA1509_47947} {RNA1310_49333} {RNA815_12944} Mlig455_067299 {REF} {Length: 2511} {TRANSSPLICED} {Human: ENSG00000283022, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=59.7, Expect=2e-08]; ENSG00000157423, HYDIN, HYDIN, axonemal central pair apparatus protein, [Score=59.7, Expect=2e-08]} {RNA1509_28768} {RNA1310_23952, RNA1509_28768} {RNA1509_28768, RNA815_3031.1} |