Data search
Results for MligTC455_38057
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38057 | 328 | 6.84 | Mlig455_031317, Mlig455_042334, Mlig455_042863 | Neo: - Age: Up-Down-Down |
Mlig455_031317 {REF} {Length: 800} {Pfam: DDE superfamily endonuclease [PF13358.8, score=48.2]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=50.8, Expect=3e-07]} {RNA1310_3236.1} {RNA815_8758} Mlig455_042334 {REF} {Length: 9768} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=71.6, Expect=6e-14]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857} Mlig455_042863 {REF} {Length: 734} {Pfam: DDE superfamily endonuclease [PF13358.8, score=53.5]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=60.5, Expect=1e-10]} {RNA1310_3236.1} {RNA815_8758} |
Cumulative graph for MligTC455_38057
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.277 | 3.171 | 0.60173 | 1.00000 | |
| RegionR2 | 1.174 | 3.171 | 0.25403 | 0.63418 | |
| RegionR3 | -0.023 | 3.171 | 0.97769 | 1.00000 | |
| RegionR4 | 0.81 | 3.171 | 0.44052 | 0.76936 | |
| RegionR5 | -0.259 | 3.171 | 0.89739 | 1.00000 | |
| RegionR6 | -0.514 | 3.171 | 0.78746 | 1.00000 | |
| RegionR7 | -0.007 | 3.171 | 0.97432 | 1.00000 | |
| RegionR8 | 1.096 | 3.171 | 0.52443 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.57 | 3.171 | 0.89918 | 1.00000 | |
| RegenerationR2 | 1.65 | 3.171 | 0.01462 | 0.19786 | |
| RegenerationR3 | 2.005 | 3.171 | 0.02025 | 0.26016 | |
| RegenerationR4 | 0.769 | 3.171 | 0.36967 | 0.79383 | |
| RegenerationR5 | 2.551 | 3.171 | 0.00166 | 0.07077 | |
| RegenerationR6 | 2.764 | 3.171 | 0.00297 | 0.06300 | |
| RegenerationBL | 2.89 | 3.171 | 0.00069 | 0.01776 | |
| RegenerationTP | 2.752 | 3.171 | 0.00505 | 0.11933 |
Genes with expression patterns similar to MligTC455_38057
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38057 | 328 | 6.84 | Mlig455_031317, Mlig455_042334, Mlig455_042863 | Neo: - Age: Up-Down-Down |
5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031317 {REF} {Length: 800} {Pfam: DDE superfamily endonuclease [PF13358.8, score=48.2]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=50.8, Expect=3e-07]} {RNA1310_3236.1} {RNA815_8758} Mlig455_042334 {REF} {Length: 9768} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=71.6, Expect=6e-14]} {RNA1509_40399} {RNA1310_340.1} {RNA815_1857} Mlig455_042863 {REF} {Length: 734} {Pfam: DDE superfamily endonuclease [PF13358.8, score=53.5]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=60.5, Expect=1e-10]} {RNA1310_3236.1} {RNA815_8758} |
|
| 2. | MligTC455_27038 | 76 | 1.59 | Mlig455_068920 | Neo: - Age: - |
1.708 | - | - | - | 0.755 | 0.953 | - | Mlig455_068920 {REF} {Length: 7461} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_26043, RNA1509_32599, RNA1509_8795} {RNA1310_1659, RNA1509_26043, RNA1509_8795} {RNA1509_26043, RNA1509_8795, RNA815_252.1} | |
| 3. | MligTC455_28153 | 87 | 1.82 | Mlig455_023355 | Neo: - Age: Down-Up-Down |
1.665 | - | - | - | 0.713 | 0.952 | - | Mlig455_023355 {REF} {Length: 2641} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=23.0]} {RNA1509_36436} {RNA1310_24275.2} {RNA815_11419.1} | |
| 4. | MligTC455_27847 | 510 | 10.62 | Mlig455_013053, Mlig455_021443 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 3.564 Regeneration-enriched BL: 3.564 |
0.975 | - | - | - | - | 0.975 | - | Mlig455_013053 {REF} {Length: 8840} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_021443 {REF} {Length: 1198} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} |
|
| 5. | MligTC455_39794 | 787 | 16.39 | Mlig455_051184 | Neo: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_051184 {REF} {Length: 1501} {TRANSSPLICED} {Smed: dd_Smed_v6_2398_0_1, dd_Smed_v6_2398_0_1, [RH, Score=167, Expect=1e-50]} {RNA1509_25151} {RNA1310_14303.1} {RNA815_5283} | |
| 6. | MligTC455_12302 | 137 | 2.85 | Mlig455_001240 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_001240 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_35425} {RNA1310_32078} {RNA815_40733} | |
| 7. | MligTC455_27841 | 1118 | 23.3 | Mlig455_021442, Mlig455_037900 | Neo: - Age: - Regeneration-upregulated BL: 4.099 Regeneration-enriched BL: 4.099 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} |
|
| 8. | MligTC455_37213 | 82 | 1.71 | Mlig455_035489 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_035489 {REF} {Length: 3502} {RNA1509_42371} {RNA1310_12088.1} {RNA815_3483} |