Data search
Results for MligTC455_38107
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38107 | 32 | 0.67 | Mlig455_029200 | Neo: - Age: - |
GABRR2 | Mlig455_029200 {REF} {Length: 2199} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=77.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=65.8]} {Human: ENSG00000111886, GABRR2, gamma-aminobutyric acid type A receptor rho2 subunit, [Score=150, Expect=5e-40]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=146, Expect=1e-38]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=149, Expect=6e-40]; ENSMUSG00000028280, Gabrr1, gamma-aminobutyric acid (GABA) C receptor, subunit rho 1, [Score=144, Expect=8e-38]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=144, Expect=8e-38]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=144, Expect=6e-38]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=144, Expect=5e-38]} {Dmel: FBgn0024963, GluClalpha, [Score=140, Expect=6e-37]} {Celegans: WBGene00000232, avr-14, Inhibitory amino acid receptor subunit gbr-2A, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_14811_0_1, dd_Smed_v6_14811_0_1, [Score=183, Expect=2e-53]} {RNA1310_127675} {RNA815_24496} |
Cumulative graph for MligTC455_38107
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.829 | 1.054 | 1.00000 | 1.00000 | |
| RegionR2 | 0.323 | 1.054 | 0.56318 | 0.92492 | |
| RegionR3 | 0.319 | 1.054 | 0.64212 | 1.00000 | |
| RegionR4 | 2.794 | 1.054 | 0.04075 | 0.16767 | |
| RegionR5 | -0.513 | 1.054 | 0.99964 | 1.00000 | |
| RegionR6 | 0.945 | 1.054 | 0.39746 | 0.97022 | |
| RegionR7 | -1.139 | 1.054 | 0.94441 | 1.00000 | |
| RegionR8 | -0.899 | 1.054 | 0.99968 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.731 | 1.054 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.635 | 1.054 | 0.55817 | 0.89776 | |
| RegenerationR3 | 1.121 | 1.054 | 0.42761 | 0.81951 | |
| RegenerationR4 | -0.29 | 1.054 | 0.80046 | 0.98667 | |
| RegenerationR5 | 1.934 | 1.054 | 0.10070 | 0.48277 | |
| RegenerationR6 | 1.221 | 1.054 | 0.38274 | 0.72331 | |
| RegenerationBL | 0.883 | 1.054 | 0.61256 | 0.95722 | |
| RegenerationTP | 0.894 | 1.054 | 0.67212 | 1.00000 |
Genes with expression patterns similar to MligTC455_38107
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38107 | 32 | 0.67 | Mlig455_029200 | Neo: - Age: - |
GABRR2 | 1 | - | - | - | - | 1.000 | - | Mlig455_029200 {REF} {Length: 2199} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=77.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=65.8]} {Human: ENSG00000111886, GABRR2, gamma-aminobutyric acid type A receptor rho2 subunit, [Score=150, Expect=5e-40]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=146, Expect=1e-38]} {Mouse: ENSMUSG00000023267, Gabrr2, gamma-aminobutyric acid (GABA) C receptor, subunit rho 2, [Score=149, Expect=6e-40]; ENSMUSG00000028280, Gabrr1, gamma-aminobutyric acid (GABA) C receptor, subunit rho 1, [Score=144, Expect=8e-38]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=144, Expect=8e-38]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=144, Expect=6e-38]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=144, Expect=5e-38]} {Dmel: FBgn0024963, GluClalpha, [Score=140, Expect=6e-37]} {Celegans: WBGene00000232, avr-14, Inhibitory amino acid receptor subunit gbr-2A, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_14811_0_1, dd_Smed_v6_14811_0_1, [Score=183, Expect=2e-53]} {RNA1310_127675} {RNA815_24496} |
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