TomoSeq data search

Data search

Results for MligTC455_38209

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38209	952	19.83	Mlig455_039951	Neo: - Age: -	ABCA5	Mlig455_039951 {REF} {Length: 7055} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=86.6]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.6]; AAA domain [PF13604.8, score=33.1]; ABC-2 family transporter protein [PF12698.9, score=31.8]; P-loop containing region of AAA domain [PF13555.8, score=30.6]; AAA domain [PF13476.8, score=27.9]; RsgA GTPase [PF03193.18, score=27.8]; AAA domain [PF13401.8, score=24.9]; Domain of unknown function (DUF4162) [PF13732.8, score=24.7]; AAA ATPase domain [PF13191.8, score=24.2]; AAA ATPase domain [PF13175.8, score=21.4]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=19.6]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=214, Expect=4e-55]; ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=205, Expect=3e-52]; ENSG00000198691, ABCA4, ATP binding cassette subfamily A member 4, [Score=204, Expect=1e-52]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=212, Expect=1e-54]; ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=209, Expect=2e-53]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=208, Expect=2e-53]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=207, Expect=3e-53]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=205, Expect=3e-52]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=210, Expect=3e-54]} {Smed: dd_Smed_v6_2300_0_4, dd_Smed_v6_2300_0_4, [Score=192, Expect=8e-49]} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1310_561.1, RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417, RNA815_264.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38209

952

19.83

Mlig455_039951

Neo: -

Age: -

ABCA5

Mlig455_039951 {REF} {Length: 7055} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=86.6]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.6]; AAA domain [PF13604.8, score=33.1]; ABC-2 family transporter protein [PF12698.9, score=31.8]; P-loop containing region of AAA domain [PF13555.8, score=30.6]; AAA domain [PF13476.8, score=27.9]; RsgA GTPase [PF03193.18, score=27.8]; AAA domain [PF13401.8, score=24.9]; Domain of unknown function (DUF4162) [PF13732.8, score=24.7]; AAA ATPase domain [PF13191.8, score=24.2]; AAA ATPase domain [PF13175.8, score=21.4]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=19.6]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=214, Expect=4e-55]; ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=205, Expect=3e-52]; ENSG00000198691, ABCA4, ATP binding cassette subfamily A member 4, [Score=204, Expect=1e-52]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=212, Expect=1e-54]; ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=209, Expect=2e-53]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=208, Expect=2e-53]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=207, Expect=3e-53]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=205, Expect=3e-52]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=210, Expect=3e-54]} {Smed: dd_Smed_v6_2300_0_4, dd_Smed_v6_2300_0_4, [Score=192, Expect=8e-49]} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1310_561.1, RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417, RNA815_264.1}

Cumulative graph for MligTC455_38209

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.236	4.571	0.82615	1.00000
RegionR2	-0.027	4.571	0.94787	1.00000
RegionR3	0.057	4.571	0.86531	1.00000
RegionR4	0.629	4.571	0.13044	0.36564
RegionR5	0.194	4.571	0.53433	0.89719
RegionR6	0.112	4.571	0.74146	1.00000
RegionR7	-0.142	4.571	0.75956	1.00000
RegionR8	-0.588	4.571	0.32500	0.95747

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.546	4.571	0.68589	1.00000
RegenerationR2	-0.325	4.571	0.33689	0.77253
RegenerationR3	0.348	4.571	0.34418	0.76780
RegenerationR4	0.264	4.571	0.49644	0.86728
RegenerationR5	0.383	4.571	0.26471	0.69616
RegenerationR6	0.784	4.571	0.03311	0.22715
RegenerationBL	0.866	4.571	0.04093	0.22979
RegenerationTP	0.347	4.571	0.49559	0.89797

Genes with expression patterns similar to MligTC455_38209

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38209	952	19.83	Mlig455_039951	Neo: - Age: -	ABCA5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039951 {REF} {Length: 7055} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=184.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=86.6]; RecF/RecN/SMC N terminal domain [PF02463.21, score=33.6]; AAA domain [PF13604.8, score=33.1]; ABC-2 family transporter protein [PF12698.9, score=31.8]; P-loop containing region of AAA domain [PF13555.8, score=30.6]; AAA domain [PF13476.8, score=27.9]; RsgA GTPase [PF03193.18, score=27.8]; AAA domain [PF13401.8, score=24.9]; Domain of unknown function (DUF4162) [PF13732.8, score=24.7]; AAA ATPase domain [PF13191.8, score=24.2]; AAA ATPase domain [PF13175.8, score=21.4]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=19.6]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=214, Expect=4e-55]; ENSG00000107331, ABCA2, ATP binding cassette subfamily A member 2, [Score=205, Expect=3e-52]; ENSG00000198691, ABCA4, ATP binding cassette subfamily A member 4, [Score=204, Expect=1e-52]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=212, Expect=1e-54]; ENSMUSG00000026944, Abca2, ATP-binding cassette, sub-family A (ABC1), member 2, [Score=209, Expect=2e-53]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=208, Expect=2e-53]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=207, Expect=3e-53]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=205, Expect=3e-52]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=2e-46]} {Celegans: WBGene00000020, abt-2, ABC Transporter family, [Score=210, Expect=3e-54]} {Smed: dd_Smed_v6_2300_0_4, dd_Smed_v6_2300_0_4, [Score=192, Expect=8e-49]} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1310_561.1, RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417} {RNA1509_20203, RNA1509_27609, RNA1509_4611, RNA1509_46417, RNA815_264.1}
2.	MligTC455_15405	771	16.05	Mlig455_015125	Neo: - Age: -	CTBP2	2.495	-	-	0.796	0.964	0.735	-	Mlig455_015125 {REF} {Length: 3617} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=185.9]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=91.0]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.7]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [RH, Score=507, Expect=5e-170]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [RH, Score=498, Expect=5e-174]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [RH, Score=507, Expect=6e-170]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [RH, Score=502, Expect=2e-175]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [RH, Score=391, Expect=9e-130]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_41815} {RNA1310_15804.1, RNA1509_41815} {RNA1509_41815, RNA815_10755}
3.	MligTC455_15404	774	16.13	Mlig455_015252	Neo: Irradiation Age: -	WBP2NL	1.683	-	-	0.719	0.964	-	-	Mlig455_015252 {REF} {Length: 1820} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [Score=50.1, Expect=5e-07]} {RNA1509_35087, RNA1509_43246, RNA1509_49119} {RNA1310_35993, RNA1509_35087, RNA1509_43246, RNA1509_49119} {RNA1509_35087, RNA1509_43246, RNA1509_49119, RNA815_16196.1}
4.	MligTC455_53124	548	11.41	Mlig455_036792, Mlig455_036798	Neo: - Age: - Region-enriched R5: 2.128/0.01152	CHORDC1	1.674	0.723	-	-	0.951	-	-	Mlig455_036792 {REF} {Length: 1356} {TRANSSPLICED} {Pfam: CHORD [PF04968.14, score=170.3]; CS domain [PF04969.18, score=20.6]} {Human: ENSG00000285023, CHORDC1, cysteine and histidine rich domain containing 1, [RH, Score=271, Expect=4e-89]; ENSG00000110172, CHORDC1, cysteine and histidine rich domain containing 1, [RH, Score=271, Expect=4e-89]} {Mouse: ENSMUSG00000001774, Chordc1, cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1, [RH, Score=273, Expect=7e-90]} {Dmel: FBgn0029503, CHORD, [RH, Score=239, Expect=1e-76]} {Celegans: WBGene00000502, chp-1, CHORD Protein; CHORD containing protein, [RH, Score=185, Expect=4e-56]} {Smed: dd_Smed_v6_1390_0_1, dd_Smed_v6_1390_0_1, [RH, Score=251, Expect=5e-82]} {RNA1509_13105, RNA1509_23497} {RNA1310_22353, RNA1509_23497} {RNA1509_23497, RNA815_10946} Mlig455_036798 {REF} {Length: 1022} {TRANSSPLICED} {Pfam: CHORD [PF04968.14, score=89.9]} {Human: ENSG00000110172, CHORDC1, cysteine and histidine rich domain containing 1, [Score=129, Expect=3e-35]; ENSG00000285023, CHORDC1, cysteine and histidine rich domain containing 1, [Score=129, Expect=3e-35]} {Mouse: ENSMUSG00000001774, Chordc1, cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1, [Score=129, Expect=2e-35]} {Dmel: FBgn0029503, CHORD, [Score=110, Expect=4e-28]} {Celegans: WBGene00000502, chp-1, CHORD Protein; CHORD containing protein, [Score=82.0, Expect=4e-18]} {Smed: dd_Smed_v6_1390_0_1, dd_Smed_v6_1390_0_1, [Score=131, Expect=1e-36]} {RNA1509_13105} {RNA1310_22353} {RNA815_10946}
5.	MligTC455_21925	1209	25.19	Mlig455_067240	Neo: - Age: - Region-enriched R5: 1.047/0.00041	SIDT2	0.955	-	-	-	-	-	0.955	Mlig455_067240 {REF} {Length: 5450} {TRANSSPLICED} {Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=690.8]} {Human: ENSG00000149577, SIDT2, SID1 transmembrane family member 2, [RH, Score=539, Expect=1e-178]} {Mouse: ENSMUSG00000034908, Sidt2, SID1 transmembrane family, member 2, [RH, Score=544, Expect=1e-180]} {Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [RH, Score=293, Expect=1e-86]} {Smed: dd_Smed_v6_6063_0_1, dd_Smed_v6_6063_0_1, [Score=445, Expect=1e-143]} {RNA1509_28518, RNA1509_3675, RNA1509_40934, RNA1509_49742, RNA1509_54885, RNA1509_56646, RNA1509_9811} {RNA1310_1885.1, RNA1509_28518, RNA1509_40934, RNA1509_49742, RNA1509_54885, RNA1509_56646, RNA1509_9811} {RNA1509_28518, RNA1509_40934, RNA1509_49742, RNA1509_54885, RNA1509_56646, RNA1509_9811, RNA815_1619.1}