Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_38271 | 28 | 0.58 | Mlig455_007218, Mlig455_007452 | Neo: - Age: - |
NMBR | Mlig455_007218 {REF} {Length: 2883} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=39.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=29.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.1]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=109, Expect=7e-26]; ENSG00000182687, GALR2, galanin receptor 2, [Score=109, Expect=7e-26]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=107, Expect=6e-25]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=104, Expect=3e-24]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=103, Expect=5e-24]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=102, Expect=1e-23]; ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=101, Expect=4e-23]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=116, Expect=9e-28]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_16861_0_1, dd_Smed_v6_16861_0_1, [Score=129, Expect=2e-33]} {RNA1509_59962} {RNA1310_93226} {RNA815_13947} Mlig455_007452 {REF} {Length: 2739} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=39.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=29.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.1]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=109, Expect=7e-26]; ENSG00000182687, GALR2, galanin receptor 2, [Score=109, Expect=7e-26]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=107, Expect=6e-25]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=104, Expect=3e-24]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=103, Expect=5e-24]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=102, Expect=1e-23]; ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=101, Expect=4e-23]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=116, Expect=9e-28]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_16861_0_1, dd_Smed_v6_16861_0_1, [Score=129, Expect=2e-33]} {RNA1509_59962} {RNA1310_93226} {RNA815_13947} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.128 | 0.976 | 1.00000 | 1.00000 | |
RegionR2 | 2.438 | 0.976 | 1.00000 | 1.00000 | |
RegionR3 | -2.593 | 0.976 | 1.00000 | 1.00000 | |
RegionR4 | -0.1 | 0.976 | 0.24351 | 0.54138 | |
RegionR5 | 0.344 | 0.976 | 0.99351 | 1.00000 | |
RegionR6 | 2.704 | 0.976 | 0.99833 | 1.00000 | |
RegionR7 | -0.695 | 0.976 | 1.00000 | 1.00000 | |
RegionR8 | -0.971 | 0.976 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 2.439 | 0.976 | 0.99982 | 1.00000 | |
RegenerationR2 | 3.157 | 0.976 | 0.07060 | 0.43130 | |
RegenerationR3 | 5.719 | 0.976 | 0.50660 | 0.85934 | |
RegenerationR4 | 1.91 | 0.976 | 0.77212 | 0.97728 | |
RegenerationR5 | -0.652 | 0.976 | 0.98450 | 1.00000 | |
RegenerationR6 | 0.472 | 0.976 | 0.72313 | 0.93761 | |
RegenerationBL | 0.507 | 0.976 | 0.99992 | 1.00000 | |
RegenerationTP | 0.854 | 0.976 | 0.99990 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_38271 | 28 | 0.58 | Mlig455_007218, Mlig455_007452 | Neo: - Age: - |
NMBR | 3 | 1.000 | - | - | - | 1.000 | 1.000 | Mlig455_007218 {REF} {Length: 2883} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=39.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=29.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.1]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=109, Expect=7e-26]; ENSG00000182687, GALR2, galanin receptor 2, [Score=109, Expect=7e-26]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=107, Expect=6e-25]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=104, Expect=3e-24]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=103, Expect=5e-24]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=102, Expect=1e-23]; ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=101, Expect=4e-23]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=116, Expect=9e-28]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_16861_0_1, dd_Smed_v6_16861_0_1, [Score=129, Expect=2e-33]} {RNA1509_59962} {RNA1310_93226} {RNA815_13947} Mlig455_007452 {REF} {Length: 2739} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=39.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=29.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=25.1]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=109, Expect=7e-26]; ENSG00000182687, GALR2, galanin receptor 2, [Score=109, Expect=7e-26]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=107, Expect=6e-25]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=104, Expect=3e-24]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=103, Expect=5e-24]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=102, Expect=1e-23]; ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=101, Expect=4e-23]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=116, Expect=9e-28]} {Celegans: WBGene00021983, npr-5, NeuroPeptide Receptor family, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_16861_0_1, dd_Smed_v6_16861_0_1, [Score=129, Expect=2e-33]} {RNA1509_59962} {RNA1310_93226} {RNA815_13947} |
2. | MligTC455_17089 | 173 | 3.6 | Mlig455_022974 | Neo: - Age: - Region-enriched R4: 2.568/0.01700 |
1.703 | - | - | - | - | 0.720 | 0.983 | Mlig455_022974 {REF} {Length: 1697} {RNA1509_56619} {RNA1310_21133.1} {RNA815_8631.1} | |
3. | MligTC455_16728 | 24 | 0.5 | Mlig455_046897 | Neo: - Age: Down-Up-Up |
0.984 | - | - | - | - | 0.984 | - | Mlig455_046897 {REF} {Length: 2092} {RNA1509_37695} {RNA1310_52562.1} {RNA815_33274} | |
4. | MligTC455_43925 | 14 | 0.28 | Mlig455_007983 | Neo: - Age: - |
0.983 | - | - | - | - | 0.983 | - | Mlig455_007983 {REF} {Length: 2821} {RNA1310_91563} | |
5. | MligTC455_01762 | 8 | 0.17 | Mlig455_065032 | Neo: - Age: - |
0.98 | - | - | - | - | 0.980 | - | Mlig455_065032 {REF} {Length: 627} {NoTransDecoderORF} {RNA1310_134975} | |
6. | MligTC455_15589 | 7 | 0.14 | Mlig455_018037 | Neo: - Age: Down-Up-Down |
0.98 | - | - | - | - | 0.980 | - | Mlig455_018037 {REF} {Length: 3443} {TRANSSPLICED} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [Score=87.8, Expect=2e-19]} {RNA1509_9501} {RNA1310_8454} {RNA815_6408} | |
7. | MligTC455_31074 | 50 | 1.04 | Mlig455_061369 | Neo: - Age: - |
MAN2C1 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_061369 {REF} {Length: 4885} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=252.5]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=92.6]; Alpha mannosidase middle domain [PF09261.13, score=67.9]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [RH, Score=611, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [RH, Score=605, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [RH, Score=734, Expect=0.0]} {RNA1509_13703} {RNA1310_2504.1, RNA1509_13703} {RNA1509_13703, RNA815_715} |
8. | MligTC455_53488 | 50 | 1.05 | Mlig455_055274 | Neo: - Age: - |
FBXL7 | 0.977 | - | - | - | - | - | 0.977 | Mlig455_055274 {REF} {Length: 3372} {Pfam: Leucine Rich repeat [PF13516.8, score=59.3]; F-box-like [PF12937.9, score=46.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=35.0]; F-box domain [PF00646.35, score=27.2]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [RH, Score=174, Expect=5e-49]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [RH, Score=176, Expect=2e-49]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=171, Expect=2e-46]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=112, Expect=4e-27]} {Smed: dd_Smed_v6_10647_0_1, dd_Smed_v6_10647_0_1, [RH, Score=111, Expect=3e-26]} {RNA1310_5789.1} {RNA815_11910} |
9. | MligTC455_53487 | 49 | 1.01 | Mlig455_006106 | Neo: - Age: Down-Down-Up |
FBXL7 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_006106 {REF} {Length: 3312} {Pfam: F-box-like [PF12937.9, score=46.0]; Leucine Rich repeat [PF13516.8, score=39.7]; F-box domain [PF00646.35, score=28.7]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=151, Expect=3e-39]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=152, Expect=2e-39]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=154, Expect=2e-39]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=99.8, Expect=4e-22]} {Smed: dd_Smed_v6_10647_0_1, dd_Smed_v6_10647_0_1, [Score=102, Expect=8e-23]} {RNA1310_5789.1} {RNA815_11910} |
10. | MligTC455_42365 | 56 | 1.17 | Mlig455_037334 | Neo: - Age: - |
CHRNA3 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_037334 {REF} {Length: 3103} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=226.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=224.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=376, Expect=9e-124]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=372, Expect=2e-122]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=360, Expect=9e-118]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=382, Expect=2e-126]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=374, Expect=2e-123]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=451, Expect=2e-153]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=384, Expect=3e-127]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_45903} {RNA1310_11151} {RNA815_10044.1} |
11. | MligTC455_50015 | 866 | 18.05 | Mlig455_019671 | Neo: - Age: Down-Up-Up |
0.971 | - | - | - | - | 0.971 | - | Mlig455_019671 {REF} {Length: 1415} {RNA1509_14216, RNA1509_46876} {RNA1310_28492, RNA1509_14216, RNA1509_46876} {RNA1509_14216, RNA1509_46876, RNA815_24621.1} | |
12. | MligTC455_38928 | 28 | 0.59 | Mlig455_046983 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_046983 {REF} {Length: 445} {NoTransDecoderORF} {RNA1509_25556} {RNA1310_73151} {RNA815_48752} | |
13. | MligTC455_43407 | 35 | 0.73 | Mlig455_021194 | Neo: - |
TRAF5 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_021194 {REF} {Length: 2878} {Pfam: TRAF-type zinc finger [PF02176.20, score=48.0]; Seven in absentia protein family [PF03145.18, score=20.5]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=200, Expect=6e-56]} {Mouse: ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]; ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=141, Expect=3e-35]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=101, Expect=2e-22]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=93.2, Expect=6e-20]} {Smed: dd_Smed_v6_3837_0_1, dd_Smed_v6_3837_0_1, [Score=113, Expect=1e-26]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1} |
14. | MligTC455_01654 | 34 | 0.71 | Mlig455_025189 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_025189 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_76847} {RNA815_29511.2} | |
15. | MligTC455_57023 | 35 | 0.72 | Mlig455_025177 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_025177 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_99479.1} {RNA815_29511.2} | |
16. | MligTC455_09713 | 21 | 0.43 | Mlig455_027637 | Neo: - Age: - |
KREMEN2 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_027637 {REF} {Length: 1298} {Pfam: WSC domain [PF01822.21, score=51.8]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=45.8, Expect=8e-06]} {RNA1509_53783} {RNA1310_34968.1} {RNA815_24434} |
17. | MligTC455_23640 | 29 | 0.6 | Mlig455_067288 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_067288 {REF} {Length: 820} {RNA1310_58177} {RNA815_30723} | |
18. | MligTC455_13897 | 26 | 0.54 | Mlig455_007882 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_007882 {REF} {Length: 1288} {RNA1310_105239.2} {RNA815_16034.1} | |
19. | MligTC455_48258 | 34 | 0.71 | Mlig455_020899 | Neo: - Age: Down-Down-Up |
VAV3 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_020899 {REF} {Length: 3371} {Pfam: Calponin homology (CH) domain [PF00307.33, score=42.1]; RhoGEF domain [PF00621.22, score=39.9]; SH2 domain [PF00017.26, score=27.7]; CAMSAP CH domain [PF11971.10, score=19.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=18.8]} {Human: ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [Score=142, Expect=3e-34]; ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [Score=141, Expect=5e-34]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=140, Expect=6e-34]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [Score=139, Expect=1e-33]} {Celegans: WBGene00006887, vav-1, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=96.7, Expect=2e-20]} {RNA1310_24185} {RNA815_29420} |
20. | MligTC455_07716 | 22 | 0.45 | Mlig455_014721 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_014721 {REF} {Length: 2344} {RNA1509_19608} {RNA1310_62084} {RNA815_38455} | |
21. | MligTC455_46229 | 215 | 4.48 | Mlig455_022523, Mlig455_022563 | Neo: - Age: - Region-enriched R2: 5.024/0.00529 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_022523 {REF} {Length: 2044} {RNA1310_42787} {RNA815_17352} Mlig455_022563 {REF} {Length: 1991} {RNA1310_42787} {RNA815_17352} |
|
22. | MligTC455_07301 | 18 | 0.38 | Mlig455_050998 | Neo: - Age: - Regeneration-upregulated R3: 7.974 Regeneration-enriched R3: 7.974 |
PRR9 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_050998 {REF} {Length: 4256} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=43.9, Expect=6e-06]} {RNA1509_38551} {RNA1310_78913} {RNA815_14106} |
23. | MligTC455_13906 | 65 | 1.34 | Mlig455_036369 | Neo: - Age: logFC(26M/2M)=-0.737 |
0.964 | - | - | - | - | 0.964 | - | Mlig455_036369 {REF} {Length: 2521} {TRANSSPLICED} {RNA1509_36398} {RNA1310_8885.1} {RNA815_2960} | |
24. | MligTC455_26235 | 63 | 1.31 | Mlig455_055768 | Neo: Germline |
0.963 | - | - | - | - | - | 0.963 | Mlig455_055768 {REF} {Length: 3821} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=125.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.4]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=97.4, Expect=4e-25]} {RNA1509_42532} {RNA1310_1190} {RNA815_22519} | |
25. | MligTC455_13221 | 46 | 0.95 | Mlig455_061047 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_061047 {REF} {Length: 1448} {NoTransDecoderORF} {RNA1310_147989} | |
26. | MligTC455_13911 | 14 | 0.3 | Mlig455_034291 | Neo: - Age: - |
ACTB | 0.961 | - | - | - | - | - | 0.961 | Mlig455_034291 {REF} {Length: 1516} {Pfam: Actin [PF00022.21, score=256.4]} {Human: ENSG00000075624, ACTB, actin beta, [Score=390, Expect=1e-135]; ENSG00000184009, ACTG1, actin gamma 1, [Score=389, Expect=3e-135]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=379, Expect=2e-131]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=377, Expect=1e-130]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=377, Expect=2e-130]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=376, Expect=3e-130]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=375, Expect=2e-129]; ENSG00000188219, POTEE, POTE ankyrin domain family member E, [Score=371, Expect=2e-120]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [Score=390, Expect=8e-136]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=389, Expect=2e-135]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=379, Expect=2e-131]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=379, Expect=2e-131]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=377, Expect=1e-130]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=377, Expect=8e-131]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=376, Expect=2e-130]} {Dmel: FBgn0000047, Act88F, Actin 88F, [Score=392, Expect=1e-136]} {Celegans: WBGene00000064, act-2, Actin-2, [Score=392, Expect=6e-137]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=397, Expect=7e-139]} {RNA1509_55881} {RNA1310_47902} {RNA815_20412} |
27. | MligTC455_15712 | 181 | 3.76 | Mlig455_030495 | Neo: - Age: - Region-enriched R8: 3.854/0.00430 |
PAX6 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_030495 {REF} {Length: 4633} {Pfam: 'Paired box' domain [PF00292.20, score=231.0]; Homeodomain [PF00046.31, score=76.2]; Homeodomain-like domain [PF13384.8, score=21.2]} {Human: ENSG00000007372, PAX6, paired box 6, [RH, Score=259, Expect=5e-80]} {Mouse: ENSMUSG00000027168, Pax6, paired box 6, [RH, Score=258, Expect=2e-78]} {Dmel: FBgn0019650, toy, twin of eyeless, [RH, Score=243, Expect=6e-72]} {Celegans: WBGene00006870, vab-3, MAB-18, [RH, Score=236, Expect=2e-70]} {Smed: dd_Smed_v6_17726_0_1, dd_Smed_v6_17726_0_1, [RH, Score=431, Expect=9e-144]} {RNA1310_37223} {RNA815_52287.1} |
28. | MligTC455_43986 | 93 | 1.93 | Mlig455_041502 | Neo: - Age: Down-Up-Up |
0.961 | - | - | - | - | 0.961 | - | Mlig455_041502 {REF} {Length: 1445} {NoTransDecoderORF} {RNA1310_32341.1} {RNA815_43781} | |
29. | MligTC455_53957 | 80 | 1.66 | Mlig455_068224 | Neo: - Age: Up-Down-Up |
0.961 | - | - | - | - | 0.961 | - | Mlig455_068224 {REF} {Length: 3283} {RNA1310_18298} {RNA815_25523} | |
30. | MligTC455_49843 | 70 | 1.46 | Mlig455_058264, Mlig455_058281, Mlig455_070786 | Neo: - Age: - |
CHRNA3, CHRNA7 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_058264 {REF} {Length: 2377} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=149.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.7]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=224, Expect=4e-66]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=222, Expect=2e-65]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=216, Expect=2e-63]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=223, Expect=8e-66]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=220, Expect=8e-65]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=219, Expect=6e-65]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=213, Expect=4e-62]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=240, Expect=3e-72]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=229, Expect=7e-69]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=227, Expect=1e-67]} {RNA1310_31785} {RNA815_40862} Mlig455_058281 {REF} {Length: 2912} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=179.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=105.5]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=1e-71]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=1e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=4e-71]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=236, Expect=1e-70]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=231, Expect=2e-69]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=229, Expect=4e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=3e-72]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=232, Expect=3e-69]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=231, Expect=7e-69]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=228, Expect=3e-68]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=252, Expect=2e-76]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=250, Expect=1e-76]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=239, Expect=7e-72]} {RNA1310_31785} {RNA815_40862} Mlig455_070786 {REF} {Length: 1486} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=36.1]} {RNA1310_31785} {RNA815_43410} |
31. | MligTC455_08374 | 6 | 0.13 | Mlig455_067349 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_067349 {REF} {Length: 119} {NoTransDecoderORF} {RNA1310_62433} {RNA815_41961} | |
32. | MligTC455_11808 | 21 | 0.44 | Mlig455_048904 | Neo: - Age: - |
MAP2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_048904 {REF} {Length: 1147} {Pfam: Tau and MAP protein, tubulin-binding repeat [PF00418.21, score=156.4]} {Human: ENSG00000078018, MAP2, microtubule associated protein 2, [Score=96.7, Expect=2e-23]} {Mouse: ENSMUSG00000015222, Map2, microtubule-associated protein 2, [Score=96.3, Expect=2e-23]; ENSMUSG00000032479, Map4, microtubule-associated protein 4, [Score=91.7, Expect=2e-22]} {Dmel: FBgn0266579, tau, [Score=112, Expect=2e-30]} {Celegans: WBGene00004212, ptl-1, Microtubule-associated protein, [Score=110, Expect=5e-29]} {Smed: dd_Smed_v6_7133_0_2, dd_Smed_v6_7133_0_2, [Score=95.5, Expect=5e-24]} {RNA1310_139049} |
33. | MligTC455_18414 | 1542 | 32.12 | Mlig455_015634 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.362 Regeneration-depleted R6: -5.924 |
KLF1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_015634 {REF} {Length: 1153} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.6]; Zinc-finger double domain [PF13465.8, score=43.1]; C2H2-type zinc finger [PF13894.8, score=35.2]; C2H2-type zinc ribbon [PF15909.7, score=22.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=119, Expect=1e-31]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=116, Expect=3e-30]; ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=115, Expect=8e-30]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=114, Expect=7e-30]; ENSMUSG00000073209, Klf14, Kruppel-like factor 14, [Score=114, Expect=3e-30]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=114, Expect=4e-31]} {Dmel: FBgn0261705, CG42741, [Score=117, Expect=3e-31]} {Celegans: WBGene00003480, klf-3, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=1e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=124, Expect=1e-35]} {RNA1509_13465, RNA1509_28695, RNA1509_33725} {RNA1310_3186.1, RNA1509_13465, RNA1509_28695, RNA1509_33725} {RNA1509_13465, RNA1509_28695, RNA1509_33725, RNA815_896.1} |
34. | MligTC455_21859 | 8 | 0.16 | Mlig455_046094 | Neo: - Age: - |
SSTR4 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_046094 {REF} {Length: 1678} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=76.6]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=75.1, Expect=3e-14]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=82.4, Expect=9e-17]} {Dmel: FBgn0250910, Octbeta3R, Octopamine beta3 receptor, [Score=52.4, Expect=4e-07]} {Celegans: WBGene00020712, ckr-1, CholecystoKinin Receptor homolog, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_3522_0_1, dd_Smed_v6_3522_0_1, [RH, Score=135, Expect=3e-36]} {RNA1310_148409} |
35. | MligTC455_45968 | 43 | 0.89 | Mlig455_058916 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_058916 {REF} {Length: 3026} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=53.9]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=29.4]} {Smed: dd_Smed_v6_27761_0_1, dd_Smed_v6_27761_0_1, [RH, Score=105, Expect=7e-25]} {RNA1310_38706} | |
36. | MligTC455_47945 | 22 | 0.45 | Mlig455_056411 | Neo: - Age: logFC(26M/2M)=1.807 |
0.958 | - | - | - | - | 0.958 | - | Mlig455_056411 {REF} {Length: 2753} {Pfam: Deoxynucleoside kinase [PF01712.21, score=47.4]; Thymidylate kinase [PF02223.19, score=21.0]} {RNA1509_50096} {RNA1310_19543} {RNA815_21860} | |
37. | MligTC455_14244 | 30 | 0.63 | Mlig455_033573 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_033573 {REF} {Length: 2130} {NoTransDecoderORF} {RNA1310_118911} | |
38. | MligTC455_39365 | 88 | 1.84 | Mlig455_017196 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_017196 {REF} {Length: 2469} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1310_52319.1} {RNA815_17448} | |
39. | MligTC455_52348 | 196 | 4.08 | Mlig455_050601 | Neo: - Age: logFC(26M/2M)=-0.400 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_050601 {REF} {Length: 3282} {Pfam: Spt20 family [PF12090.10, score=19.8]} {RNA1509_7271} {RNA1310_26412} {RNA815_23572} | |
40. | MligTC455_30491 | 31 | 0.65 | Mlig455_008764 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R4: 5.721/0.00005 |
PPEF1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_008764 {REF} {Length: 4579} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=97.3]; EF-hand domain pair [PF13499.8, score=70.7]; EF hand [PF00036.34, score=60.1]; EF-hand domain pair [PF13833.8, score=56.7]; EF-hand domain [PF13405.8, score=46.2]; EF hand [PF13202.8, score=40.6]; PPP5 TPR repeat region [PF08321.14, score=33.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=20.5]; IQ calmodulin-binding motif [PF00612.29, score=19.7]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=563, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [RH, Score=552, Expect=0.0]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [RH, Score=624, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_5920} {RNA1310_46136} {RNA815_2260.1} |
41. | MligTC455_39544 | 611 | 12.73 | Mlig455_001809, Mlig455_001836, Mlig455_062227, Mlig455_062236 | Neo: - Age: - Region-specific R2: 8.576 Region-enriched R2: 8.112/0.00016 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_001809 {REF} {Length: 1067} {RNA1509_52939} {RNA1310_72581} {RNA815_24546} Mlig455_001836 {REF} {Length: 1065} {RNA1509_52939} {RNA1310_72581, RNA1509_52939} {RNA1509_52939, RNA815_24546} Mlig455_062227 {REF} {Length: 3520} {RNA1509_52939} {RNA1310_72581} {RNA815_24546} Mlig455_062236 {REF} {Length: 620} {RNA1509_52939} {RNA1310_72581} {RNA815_24546} |
|
42. | MligTC455_42664 | 24 | 0.5 | Mlig455_025689 | Neo: - Age: Up-Down-Down |
0.953 | - | - | - | - | - | 0.953 | Mlig455_025689 {REF} {Length: 2068} {RNA1310_32888} | |
43. | MligTC455_48043 | 1751 | 36.48 | Mlig455_017279, Mlig455_017291 | Neo: - Age: - Region-enriched R7: 2.553/0.00000 Regeneration-downregulated BL: -2.231 Regeneration-depleted BL: -2.231 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_017279 {REF} {Length: 4223} {RNA1509_52225} {RNA1310_3440.1} {RNA815_638.1} Mlig455_017291 {REF} {Length: 3855} {RNA1509_3814, RNA1509_50356} {RNA1310_3440.1, RNA1509_50356} {RNA1509_50356, RNA815_638.1} |
|
44. | MligTC455_14184 | 23 | 0.48 | Mlig455_026684 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_026684 {REF} {Length: 674} {NoTransDecoderORF} {RNA1310_72508} {RNA815_40858} | |
45. | MligTC455_25483 | 620 | 12.92 | Mlig455_020235 | Neo: - Age: logFC(26M/2M)=-0.339 Region-enriched R7: 2.631/0.00000 |
NAGS | 0.952 | - | - | - | - | 0.952 | - | Mlig455_020235 {REF} {Length: 2028} {Pfam: NAT, N-acetyltransferase, of N-acetylglutamate synthase [PF04768.15, score=139.1]} {Human: ENSG00000161653, NAGS, N-acetylglutamate synthase, [RH, Score=191, Expect=5e-54]} {Mouse: ENSMUSG00000048217, Nags, N-acetylglutamate synthase, [RH, Score=190, Expect=6e-54]} {Smed: dd_Smed_v6_9405_0_1, dd_Smed_v6_9405_0_1, [RH, Score=284, Expect=2e-90]} {RNA1509_13943} {RNA1310_12016, RNA1509_13943} {RNA1509_13943, RNA815_4247} |
46. | MligTC455_27376 | 507 | 10.57 | Mlig455_023327 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_023327 {REF} {Length: 1687} {NoTransDecoderORF} {RNA1509_32297} {RNA1310_63447} {RNA815_9685.1} |