TomoSeq data search

Data search

Results for MligTC455_38305

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38305	20325	423.44	Mlig455_042088, Mlig455_065821	Neo: Int S/G2/M Age: logFC(26M/2M)=0.400	RPL13A	Mlig455_042088 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_675} {RNA1310_44513.1} {RNA815_22376} Mlig455_065821 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_51276, RNA1509_675} {RNA1310_44513.1, RNA1509_51276, RNA1509_675} {RNA1509_51276, RNA1509_675, RNA815_22376}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38305

20325

423.44

Mlig455_042088, Mlig455_065821

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.400

RPL13A

Mlig455_042088 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_675} {RNA1310_44513.1} {RNA815_22376}

Mlig455_065821 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_51276, RNA1509_675} {RNA1310_44513.1, RNA1509_51276, RNA1509_675} {RNA1509_51276, RNA1509_675, RNA815_22376}

Cumulative graph for MligTC455_38305

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.175	8.814	0.00336	0.18541
RegionR2	-0.748	8.814	0.01873	0.14688
RegionR3	0.26	8.814	0.33161	0.86962
RegionR4	0.659	8.814	0.02329	0.11352
RegionR5	0.656	8.814	0.01050	0.05986
RegionR6	0.257	8.814	0.33656	0.92397
RegionR7	0.364	8.814	0.16226	0.74400
RegionR8	-0.273	8.814	0.36340	0.99790

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.139	8.814	0.76965	1.00000
RegenerationR2	-0.402	8.814	0.24642	0.69409
RegenerationR3	-0.507	8.814	0.15093	0.58024
RegenerationR4	-0.489	8.814	0.17484	0.61330
RegenerationR5	-0.796	8.814	0.02248	0.25814
RegenerationR6	-0.441	8.814	0.20868	0.55174
RegenerationBL	-0.385	8.814	0.20641	0.54863
RegenerationTP	-0.499	8.814	0.12844	0.54055

Genes with expression patterns similar to MligTC455_38305

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38305	20325	423.44	Mlig455_042088, Mlig455_065821	Neo: Int S/G2/M Age: logFC(26M/2M)=0.400	RPL13A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042088 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_675} {RNA1310_44513.1} {RNA815_22376} Mlig455_065821 {REF} {Length: 779} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=94.6]} {Human: ENSG00000142541, RPL13A, ribosomal protein L13a, [RH, Score=266, Expect=3e-91]} {Mouse: ENSMUSG00000074129, Rpl13a, ribosomal protein L13A, [RH, Score=260, Expect=5e-89]; ENSMUSG00000089989, Gm45713, predicted gene 45713, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0037351, RpL13A, Ribosomal protein L13A, [RH, Score=232, Expect=8e-78]} {Celegans: WBGene00004428, rpl-16, 60S ribosomal protein L13a, [RH, Score=226, Expect=2e-75]} {Smed: dd_Smed_v6_287_0_1, dd_Smed_v6_287_0_1, [RH, Score=268, Expect=2e-92]} {RNA1509_51276, RNA1509_675} {RNA1310_44513.1, RNA1509_51276, RNA1509_675} {RNA1509_51276, RNA1509_675, RNA815_22376}
2.	MligTC455_51803	1043	21.73	Mlig455_039187	Neo: - Age: logFC(26M/2M)=-0.692	CHMP5	0.968	-	-	-	0.968	-	-	Mlig455_039187 {REF} {Length: 1356} {Pfam: Snf7 [PF03357.23, score=180.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=20.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=292, Expect=1e-100]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=292, Expect=7e-101]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=278, Expect=2e-95]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=4e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=3e-121]} {RNA1509_25388} {RNA1310_25926.1} {RNA815_8046}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38305

20325

423.44

Mlig455_042088, Mlig455_065821

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.400

RPL13A

1.000

MligTC455_51803

1043

21.73

Mlig455_039187

Neo: -

Age: logFC(26M/2M)=-0.692

CHMP5

0.968

Mlig455_039187 {REF} {Length: 1356} {Pfam: Snf7 [PF03357.23, score=180.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=20.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=292, Expect=1e-100]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=292, Expect=7e-101]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=278, Expect=2e-95]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=4e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=3e-121]} {RNA1509_25388} {RNA1310_25926.1} {RNA815_8046}