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Results for MligTC455_38315

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38315 48 1.00 Mlig455_008808

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.988/0.00620

 Mlig455_008808 {REF} {Length: 1766} {RNA1509_4487, RNA1509_8864} {RNA1310_15807, RNA1509_8864} {RNA1509_8864, RNA815_6342}

Cumulative graph for MligTC455_38315

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.037 1.533 0.62149 1.00000
RegionR2 -1.934 1.533 0.99942 1.00000
RegionR3 -0.077 1.533 0.88543 1.00000
RegionR4 3.988 1.533 0.00052 0.00620
RegionR5 -0.666 1.533 0.98116 1.00000
RegionR6 -1.304 1.533 0.99669 1.00000
RegionR7 -0.033 1.533 0.87062 1.00000
RegionR8 3.063 1.533 0.06635 0.49669

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.071 1.533 1.00000 1.00000
RegenerationR2 -2.115 1.533 0.18213 0.62564
RegenerationR3 -3.934 1.533 0.00754 0.15887
RegenerationR4 -2.214 1.533 0.00527 0.10324
RegenerationR5 -2.024 1.533 0.11459 0.50978
RegenerationR6 -2.827 1.533 0.13337 0.44851
RegenerationBL -4.463 1.533 0.09719 0.36592
RegenerationTP -4.713 1.533 0.07437 0.43642


Genes with expression patterns similar to MligTC455_38315

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38315 48 1 Mlig455_008808

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.988/0.00620

 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_008808 {REF} {Length: 1766} {RNA1509_4487, RNA1509_8864} {RNA1310_15807, RNA1509_8864} {RNA1509_8864, RNA815_6342}
2. MligTC455_31567 788 16.42 Mlig455_015826, Mlig455_023660

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.553

Region-enriched R4: 3.520/0.00000

 4.578 0.909 0.744 0.962 - 0.999 0.964

Mlig455_015826 {REF} {Length: 3545} {RNA1509_3240} {RNA1310_3886} {RNA815_13006}

Mlig455_023660 {REF} {Length: 3908} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.4]} {RNA1509_3240} {RNA1310_3886, RNA1509_3240} {RNA1509_3240, RNA815_13006}
3. MligTC455_13585 510 10.62 Mlig455_025444, Mlig455_025451

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.403

Region-specific R4: 5.989

Region-enriched R4: 3.044/0.00000

 4.576 0.903 0.722 0.970 - 0.998 0.983

Mlig455_025444 {REF} {Length: 1962} {RNA1509_37933, RNA1509_8059} {RNA1310_20766, RNA1509_37933} {RNA1509_37933, RNA815_5932}

Mlig455_025451 {REF} {Length: 1994} {RNA1509_37683, RNA1509_8059} {RNA1310_20766, RNA1509_37683, RNA1509_8059} {RNA1509_37683, RNA1509_8059, RNA815_5932}
4. MligTC455_31566 395 8.22 Mlig455_015818

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.427

Region-enriched R4: 3.499/0.00000

 4.574 0.909 0.743 0.961 - 0.999 0.962 Mlig455_015818 {REF} {Length: 3013} {RNA1509_3240} {RNA1310_3886} {RNA815_25776}
5. MligTC455_34448 130 2.71 Mlig455_037134

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.556

Region-enriched R4: 4.959/0.00000

 PPP1CC 4.564 0.928 0.760 0.911 - 0.999 0.966 Mlig455_037134 {REF} {Length: 1561} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=2e-65]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=1e-65]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=2e-63]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=210, Expect=3e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=1e-63]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=5e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=217, Expect=6e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=5e-67]} {RNA1509_57984, RNA1509_8839} {RNA1310_21841, RNA1509_57984, RNA1509_8839} {RNA1509_57984, RNA1509_8839, RNA815_11327.2}
6. MligTC455_30426 143 2.98 Mlig455_054847

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.391

Region-enriched R4: 6.311/0.00000

 4.562 0.902 0.758 0.916 - 0.999 0.987 Mlig455_054847 {REF} {Length: 1258} {RNA1509_29474, RNA1509_50175} {RNA1310_19336.1, RNA1509_29474} {RNA1509_29474, RNA815_9239.1}
7. MligTC455_52711 134 2.8 Mlig455_027431, Mlig455_027436

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.507

Region-enriched R4: 4.964/0.00021

 4.558 0.945 0.747 0.886 - 0.992 0.988

Mlig455_027431 {REF} {Length: 4137} {RNA1509_4107, RNA1509_59403} {RNA1310_2225.1, RNA1509_59403} {RNA1509_59403, RNA815_686.1}

Mlig455_027436 {REF} {Length: 4384} {RNA1509_4107} {RNA1310_2225.1} {RNA815_686.1}
8. MligTC455_09926 70 1.47 Mlig455_025816

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.101

Region-enriched R4: 4.629/0.00490

 4.557 0.892 0.764 0.932 - 0.991 0.978 Mlig455_025816 {REF} {Length: 1953} {RNA1509_26184, RNA1509_32110} {RNA1310_7987, RNA1509_26184} {RNA1509_26184, RNA815_4326}
9. MligTC455_11232 94 1.95 Mlig455_023098

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.902

Region-specific R4: 6.287

Region-enriched R4: 4.229/0.00014

 4.55 0.913 0.710 0.965 - 0.992 0.970 Mlig455_023098 {REF} {Length: 657} {RNA1509_22816} {RNA1310_44682} {RNA815_26712}
10. MligTC455_15057 34 0.7 Mlig455_070087

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.550

 4.548 0.924 0.747 0.891 - 0.998 0.988 Mlig455_070087 {REF} {Length: 1085} {RNA1509_49814} {RNA1310_34525, RNA1509_49814} {RNA1509_49814, RNA815_24432.1}
11. MligTC455_46681 175 3.65 Mlig455_036558

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.860

Region-enriched R4: 4.278/0.00287

 4.548 0.910 0.738 0.958 - 0.997 0.945 Mlig455_036558 {REF} {Length: 2084} {RNA1509_7069} {RNA1310_10173} {RNA815_15925}
12. MligTC455_34400 19 0.4 Mlig455_015681

Neo: Irradiation

Age: -

 4.545 0.894 0.729 0.960 - 1.000 0.962 Mlig455_015681 {REF} {Length: 2461} {RNA1509_42201} {RNA1310_12457} {RNA815_4461}
13. MligTC455_40206 86 1.78 Mlig455_059439

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.689

Region-enriched R4: 2.922/0.02473

 4.545 0.898 0.725 0.954 - 0.994 0.974 Mlig455_059439 {REF} {Length: 1940} {RNA1509_20476, RNA1509_54675} {RNA1310_19483, RNA1509_54675} {RNA1509_54675, RNA815_26243}
14. MligTC455_46288 113 2.35 Mlig455_055376

Neo: -

Age: -

Region-specific R4: 5.336

Region-enriched R4: 3.561/0.01529

 4.542 0.857 0.768 0.965 - 0.964 0.988 Mlig455_055376 {REF} {Length: 1070} {RNA1509_18541} {RNA1310_8605} {RNA815_21658}
15. MligTC455_51531 36 0.75 Mlig455_069426

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.849

 4.54 0.931 0.704 0.929 - 1.000 0.976 Mlig455_069426 {REF} {Length: 1021} {RNA1509_18144} {RNA1310_11588} {RNA815_6383}
16. MligTC455_11654 101 2.1 Mlig455_007138

Neo: Germline

Age: -

Region-specific R4: 6.665

Region-enriched R4: 5.098/0.00001

 4.537 0.887 0.752 0.954 - 1.000 0.944 Mlig455_007138 {REF} {Length: 1163} {RNA1509_44532} {RNA1310_27904.2} {RNA815_23946.1}
17. MligTC455_16601 1066 22.2 Mlig455_006194, Mlig455_059281, Mlig455_065219

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.505

Region-enriched R4: 5.045/0.00000

 CHMP4B 4.537 0.901 0.714 0.950 - 0.987 0.985

Mlig455_006194 {REF} {Length: 1268} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_33100, RNA1509_7427} {RNA1310_28383, RNA1509_33100, RNA1509_7427} {RNA1509_33100, RNA1509_7427, RNA815_12898}

Mlig455_059281 {REF} {Length: 1249} {Pfam: Snf7 [PF03357.23, score=144.9]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=163, Expect=6e-50]; ENSG00000254692, AL136295.1, novel protein, [Score=158, Expect=4e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=158, Expect=4e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=162, Expect=7e-50]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=8e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=160, Expect=2e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=169, Expect=6e-53]} {RNA1509_29106, RNA1509_7427} {RNA1310_28383, RNA1509_29106} {RNA1509_29106, RNA815_12898}

Mlig455_065219 {REF} {Length: 1267} {Pfam: Snf7 [PF03357.23, score=144.3]} {Human: ENSG00000101421, CHMP4B, charged multivesicular body protein 4B, [Score=161, Expect=3e-49]; ENSG00000254692, AL136295.1, novel protein, [Score=159, Expect=1e-44]; ENSG00000285502, AL136295.15, novel protein, [Score=159, Expect=1e-44]} {Mouse: ENSMUSG00000038467, Chmp4b, charged multivesicular body protein 4B, [Score=160, Expect=3e-49]} {Dmel: FBgn0086656, shrb, shrub, [Score=159, Expect=6e-49]} {Celegans: WBGene00016961, vps-32.1, Related to yeast Vacuolar Protein Sorting factor, [Score=159, Expect=9e-49]} {Smed: dd_Smed_v6_654_0_1, dd_Smed_v6_654_0_1, [Score=168, Expect=1e-52]} {RNA1509_7427} {RNA1310_28383} {RNA815_12898}
18. MligTC455_03074 52 1.09 Mlig455_006716

Neo: Irradiation

Age: logFC(26M/2M)=-0.505

Region-specific R4: 7.083

Region-enriched R4: 6.241/0.00001

 4.533 0.878 0.736 0.943 - 0.992 0.984 Mlig455_006716 {REF} {Length: 1491} {RNA1509_37401} {RNA1310_30754} {RNA815_10474.1}
19. MligTC455_17272 391 8.14 Mlig455_025736, Mlig455_025765, Mlig455_064426

Neo: Germline

Age: logFC(26M/2M)=0.555

Region-specific R4: 4.939

Region-enriched R4: 2.762/0.00014

 4.532 0.924 0.711 0.933 - 0.976 0.988

Mlig455_025736 {REF} {Length: 2555} {TRANSSPLICED} {RNA1509_28700, RNA1509_39620} {RNA1310_9149, RNA1509_28700, RNA1509_39620} {RNA1509_28700, RNA1509_39620, RNA815_11141}

Mlig455_025765 {REF} {Length: 2544} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}

Mlig455_064426 {REF} {Length: 2543} {TRANSSPLICED} {RNA1509_39620} {RNA1310_9149} {RNA815_11141}
20. MligTC455_10830 366 7.63 Mlig455_019653, Mlig455_048055, Mlig455_048075

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.268

Region-specific R4: 6.596

Region-enriched R4: 5.277/0.00003

 4.529 0.902 0.755 0.914 - 0.989 0.969

Mlig455_019653 {REF} {Length: 2478} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}

Mlig455_048055 {REF} {Length: 2719} {RNA1509_31954} {RNA1310_9015} {RNA815_20880}

Mlig455_048075 {REF} {Length: 2358} {RNA1509_31954} {RNA1310_9515.1} {RNA815_20880}
21. MligTC455_20012 305 6.36 Mlig455_016785, Mlig455_016805

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.261

Region-enriched R4: 5.131/0.00000

 4.527 0.824 0.737 0.989 - 1.000 0.977

Mlig455_016785 {REF} {Length: 1241} {Pfam: Transmembrane domain of transglycosylase PBP1 at N-terminal [PF14812.8, score=20.9]} {RNA1509_18738} {RNA1310_6737.1} {RNA815_3362}

Mlig455_016805 {REF} {Length: 1297} {Pfam: Transmembrane domain of transglycosylase PBP1 at N-terminal [PF14812.8, score=20.3]} {RNA1509_18738} {RNA1310_6737.1, RNA1509_18738} {RNA1509_18738, RNA815_3362}
22. MligTC455_24794 303 6.3 Mlig455_021633, Mlig455_021686

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.296

Region-specific R4: 7.227

Region-enriched R4: 4.321/0.00000

 4.523 0.929 0.707 0.910 - 0.984 0.993

Mlig455_021633 {REF} {Length: 3836} {RNA1509_50179, RNA1509_8555} {RNA1310_2773, RNA1509_50179} {RNA1509_50179, RNA815_7241}

Mlig455_021686 {REF} {Length: 3869} {RNA1509_8555} {RNA1310_2773, RNA1509_8555} {RNA1509_8555, RNA815_7241}
23. MligTC455_22769 159 3.32 Mlig455_053542

Neo: Irradiation

Age: -

Region-specific R4: 6.498

Region-enriched R4: 4.188/0.00019

 4.523 0.818 0.781 0.932 - 1.000 0.992 Mlig455_053542 {REF} {Length: 576} {RNA1509_51891} {RNA1310_68550.2} {RNA815_35201.1}
24. MligTC455_20316 103 2.15 Mlig455_022902

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.730

Region-specific R4: 5.387

Region-enriched R4: 3.812/0.00061

Regeneration-downregulated R4: -2.845

Regeneration-depleted R4: -2.845

 4.521 0.889 0.703 0.949 - 0.997 0.983 Mlig455_022902 {REF} {Length: 1679} {RNA1509_10210} {RNA1310_9343} {RNA815_7347}
25. MligTC455_51571 79 1.65 Mlig455_010868

Neo: Germline

Age: Up-Down-Down

 4.521 0.878 0.746 0.935 - 0.989 0.973 Mlig455_010868 {REF} {Length: 1811} {Pfam: Immunoglobulin domain [PF13927.8, score=33.3]; Immunoglobulin I-set domain [PF07679.18, score=29.3]; Immunoglobulin domain [PF00047.27, score=24.6]; Immunoglobulin domain [PF13895.8, score=24.1]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_18745} {RNA1310_19824} {RNA815_8566}
26. MligTC455_49748 492 10.25 Mlig455_011517, Mlig455_011595

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.828

Region-enriched R4: 2.304/0.01187

 ARPC4-TTLL3 4.52 0.915 0.708 0.927 - 0.995 0.975

Mlig455_011517 {REF} {Length: 3213} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=20.1]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=55.8, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=55.8, Expect=1e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=54.3, Expect=7e-07]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.1, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.5, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=67.0, Expect=2e-11]} {RNA1509_13905} {RNA1310_500} {RNA815_1534}

Mlig455_011595 {REF} {Length: 3209} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=90.5]; YheC/D like ATP-grasp [PF14398.8, score=19.6]} {Human: ENSG00000250151, ARPC4-TTLL3, ARPC4-TTLL3 readthrough, [Score=56.2, Expect=2e-07]; ENSG00000214021, TTLL3, tubulin tyrosine ligase like 3, [Score=56.2, Expect=2e-07]; ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000030276, Ttll3, tubulin tyrosine ligase-like family, member 3, [Score=55.5, Expect=3e-07]; ENSMUSG00000038756, Ttll6, tubulin tyrosine ligase-like family, member 6, [Score=53.9, Expect=9e-07]} {Smed: dd_Smed_v6_11158_0_1, dd_Smed_v6_11158_0_1, [Score=67.4, Expect=2e-11]} {RNA1509_13905, RNA1509_4934} {RNA1310_500, RNA1509_13905, RNA1509_4934} {RNA1509_13905, RNA1509_4934, RNA815_1534}
27. MligTC455_09246 51 1.07 Mlig455_003134

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.651

 FKBP4 4.51 0.932 0.739 0.963 - 0.962 0.914 Mlig455_003134 {REF} {Length: 1951} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=98.8]; Tetratricopeptide repeat [PF00515.30, score=48.4]; Tetratricopeptide repeat [PF07719.19, score=39.4]; Tetratricopeptide repeat [PF14559.8, score=27.2]; Tetratricopeptide repeat [PF13371.8, score=25.7]; TPR repeat [PF13414.8, score=25.4]; Tetratricopeptide repeat [PF13428.8, score=24.1]; Tetratricopeptide repeat [PF13181.8, score=24.0]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=20.8]} {Human: ENSG00000004478, FKBP4, FK506 binding protein 4, [Score=273, Expect=5e-86]} {Mouse: ENSMUSG00000030357, Fkbp4, FK506 binding protein 4, [Score=270, Expect=8e-85]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=199, Expect=3e-58]} {Celegans: WBGene00001431, fkb-6, Peptidylprolyl isomerase, [Score=211, Expect=5e-63]} {Smed: dd_Smed_v6_1921_0_1, dd_Smed_v6_1921_0_1, [Score=190, Expect=4e-55]} {RNA1509_12859, RNA1509_20590} {RNA1310_7830, RNA1509_12859, RNA1509_20590} {RNA1509_12859, RNA1509_20590, RNA815_860}
28. MligTC455_26663 213 4.43 Mlig455_047277

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.168

Region-enriched R4: 3.586/0.00008

 4.51 0.860 0.720 0.966 - 0.997 0.967 Mlig455_047277 {REF} {Length: 1312} {RNA1509_29739} {RNA1310_23273} {RNA815_11477}
29. MligTC455_15433 240 5 Mlig455_021989

Neo: Irradiation

Age: -

Region-specific R4: 6.291

Region-enriched R4: 3.233/0.00003

 PPP2CB 4.509 0.835 0.727 0.974 - 0.987 0.986 Mlig455_021989 {REF} {Length: 1795} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.6]} {Human: ENSG00000104695, PPP2CB, protein phosphatase 2 catalytic subunit beta, [Score=144, Expect=1e-38]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=142, Expect=7e-38]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=142, Expect=5e-38]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=7e-38]; ENSG00000113575, PPP2CA, protein phosphatase 2 catalytic subunit alpha, [Score=140, Expect=2e-37]} {Mouse: ENSMUSG00000009630, Ppp2cb, protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform, [Score=144, Expect=8e-39]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=142, Expect=3e-38]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=142, Expect=5e-38]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=142, Expect=5e-38]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=5e-38]; ENSMUSG00000020349, Ppp2ca, protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform, [Score=140, Expect=1e-37]} {Dmel: FBgn0000711, flw, flapwing, [Score=152, Expect=5e-42]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [Score=151, Expect=5e-40]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=152, Expect=4e-42]} {RNA1509_2123} {RNA1310_19373} {RNA815_7711}
30. MligTC455_32341 289 6.03 Mlig455_056565

Neo: Irradiation

Age: -

Region-specific R4: 6.178

Region-enriched R4: 3.257/0.00020

 4.508 0.899 0.712 0.951 - 0.990 0.956 Mlig455_056565 {REF} {Length: 2089} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1}
31. MligTC455_04511 58 1.2 Mlig455_015094

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 5.762/0.00002

 C1GALT1 4.507 0.921 0.755 0.870 - 0.978 0.983 Mlig455_015094 {REF} {Length: 1166} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=60.8, Expect=1e-11]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=61.6, Expect=4e-12]} {Dmel: FBgn0033271, CG8708, [Score=61.6, Expect=3e-12]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=73.9, Expect=1e-16]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=72.0, Expect=4e-16]} {RNA1509_52982} {RNA1310_33395, RNA1509_52982} {RNA1509_52982, RNA815_16255}
32. MligTC455_50097 671 13.97 Mlig455_008882, Mlig455_008987

Neo: Irradiation

Age: logFC(26M/2M)=-0.467

Region-specific R4: 5.724

Region-enriched R4: 3.630/0.00000

 4.507 0.884 0.703 0.944 - 0.996 0.980

Mlig455_008882 {REF} {Length: 1875} {RNA1509_13275, RNA1509_14637} {RNA1310_30828.1, RNA1509_13275, RNA1509_14637} {RNA1509_13275, RNA1509_14637, RNA815_15872}

Mlig455_008987 {REF} {Length: 1943} {RNA1509_13275} {RNA1310_30828.1} {RNA815_15872}
33. MligTC455_19599 1334 27.8 Mlig455_007189, Mlig455_007198, Mlig455_007259

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.541

Region-enriched R4: 5.019/0.00003

 4.506 0.873 0.733 0.934 - 0.997 0.969

Mlig455_007189 {REF} {Length: 2059} {RNA1509_3895} {RNA1310_41352} {RNA815_20807}

Mlig455_007198 {REF} {Length: 2248} {RNA1509_3895} {RNA1310_41352} {RNA815_20807}

Mlig455_007259 {REF} {Length: 2248} {RNA1509_18929, RNA1509_3895} {RNA1310_41352, RNA1509_18929, RNA1509_3895} {RNA1509_18929, RNA1509_3895, RNA815_20807}
34. MligTC455_28938 81 1.68 Mlig455_010206

Neo: Irradiation

Age: -

Region-specific R4: 6.354

Region-enriched R4: 4.718/0.00014

 4.506 0.894 0.701 0.939 - 0.992 0.980 Mlig455_010206 {REF} {Length: 3053} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=32.0]} {RNA1509_18466} {RNA1310_16470.2} {RNA815_4608.1}
35. MligTC455_10165 180 3.75 Mlig455_010194, Mlig455_058694

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.661

Region-enriched R4: 3.345/0.03003

 4.504 0.903 0.712 0.962 - 0.946 0.981

Mlig455_010194 {REF} {Length: 1334} {RNA1509_33844} {RNA1310_50327} {RNA815_17489}

Mlig455_058694 {REF} {Length: 1370} {RNA1509_33844, RNA1509_41444} {RNA1310_50327, RNA1509_33844, RNA1509_41444} {RNA1509_33844, RNA1509_41444, RNA815_17489}
36. MligTC455_22751 394 8.22 Mlig455_007254, Mlig455_007345, Mlig455_015861, Mlig455_036587, Mlig455_038600, Mlig455_041298, Mlig455_053849, Mlig455_060441, Mlig455_062435, Mlig455_064129

Neo: Germline

Age: -

Region-specific R4: 6.359

Region-enriched R4: 4.764/0.00000

 4.502 0.868 0.756 0.935 - 0.958 0.985

Mlig455_007254 {REF} {Length: 229} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_45085} {RNA815_26718}

Mlig455_007345 {REF} {Length: 588} {RNA1509_32444} {RNA1310_45085} {RNA815_23145.2}

Mlig455_015861 {REF} {Length: 1094} {RNA1509_32444} {RNA1310_29966} {RNA815_23145.3}

Mlig455_036587 {REF} {Length: 676} {Pfam: Phage integrase family [PF00589.24, score=32.8]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_038600 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_041298 {REF} {Length: 449} {Pfam: THAP domain [PF05485.14, score=35.9]} {RNA1509_32832} {RNA1310_28735} {RNA815_22569.1}

Mlig455_053849 {REF} {Length: 1396} {Pfam: Phage integrase family [PF00589.24, score=32.3]; Domain of unknown function (DUF3504) [PF12012.10, score=25.5]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_060441 {REF} {Length: 784} {RNA1509_32444} {RNA1310_41193} {RNA815_23145.3}

Mlig455_062435 {REF} {Length: 6496} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=108.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.5]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=116, Expect=2e-31]} {RNA1509_46426} {RNA1310_11609} {RNA815_14050}

Mlig455_064129 {REF} {Length: 1025} {NoTransDecoderORF} {RNA1509_32832} {RNA1310_112433} {RNA815_11263}
37. MligTC455_50918 226 4.71 Mlig455_006863

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.415

Region-enriched R4: 3.697/0.00000

 4.502 0.862 0.706 0.951 - 0.998 0.985 Mlig455_006863 {REF} {Length: 1310} {RNA1509_32284, RNA1509_44655} {RNA1310_28031.1, RNA1509_32284, RNA1509_44655} {RNA1509_32284, RNA1509_44655, RNA815_13214.1}
38. MligTC455_26664 214 4.47 Mlig455_069338

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.110

Region-enriched R4: 3.398/0.00008

 4.502 0.860 0.720 0.966 - 0.994 0.962 Mlig455_069338 {REF} {Length: 1180} {RNA1509_30850} {RNA1310_23273} {RNA815_11477}
39. MligTC455_17790 522 10.87 Mlig455_059610

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.514

Region-specific R4: 5.964

Region-enriched R4: 3.113/0.00006

 4.501 0.849 0.704 0.980 - 0.993 0.975 Mlig455_059610 {REF} {Length: 1650} {RNA1509_13993} {RNA1310_21653.1} {RNA815_12057.1}
40. MligTC455_13808 155 3.23 Mlig455_034941

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.085

Region-enriched R4: 3.769/0.00009

 NLGN4Y 4.497 0.903 0.732 0.906 - 0.986 0.970 Mlig455_034941 {REF} {Length: 3017} {Pfam: Carboxylesterase family [PF00135.30, score=88.0]} {Human: ENSG00000165246, NLGN4Y, neuroligin 4 Y-linked, [Score=65.9, Expect=2e-10]; ENSG00000146938, NLGN4X, neuroligin 4 X-linked, [Score=65.5, Expect=3e-10]; ENSG00000172831, CES2, carboxylesterase 2, [Score=63.5, Expect=9e-10]} {Mouse: ENSMUSG00000063887, Nlgn1, neuroligin 1, [Score=62.8, Expect=1e-09]; ENSMUSG00000069922, Ces3a, carboxylesterase 3A, [Score=62.0, Expect=2e-09]; ENSMUSG00000050097, Ces2b, carboxyesterase 2B, [Score=61.6, Expect=2e-09]; ENSMUSG00000062181, Ces3b, carboxylesterase 3B, [Score=60.8, Expect=4e-09]; ENSMUSG00000062826, Ces2f, carboxylesterase 2F, [Score=60.5, Expect=5e-09]; ENSMUSG00000061825, Ces2c, carboxylesterase 2C, [Score=60.5, Expect=5e-09]; ENSMUSG00000051790, Nlgn2, neuroligin 2, [Score=60.5, Expect=7e-09]} {Dmel: FBgn0032057, CG9287, [Score=68.9, Expect=9e-12]} {Celegans: WBGene00017478, F15A8.6, Carboxylic ester hydrolase, [Score=73.2, Expect=3e-13]} {Smed: dd_Smed_v6_14790_0_1, dd_Smed_v6_14790_0_1, [Score=63.5, Expect=2e-10]} {RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1310_5544.2, RNA1509_21813, RNA1509_49812, RNA1509_52450} {RNA1509_21813, RNA1509_49812, RNA1509_52450, RNA815_2570}
41. MligTC455_28875 232 4.83 Mlig455_042410, Mlig455_042421

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.396

Region-enriched R4: 4.484/0.00000

 4.494 0.881 0.721 0.943 - 0.984 0.965

Mlig455_042410 {REF} {Length: 1958} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.1]} {RNA1509_39955} {RNA1310_12615.4} {RNA815_10094.1}

Mlig455_042421 {REF} {Length: 2235} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=33.1]} {RNA1509_39955} {RNA1310_12615.4} {RNA815_10094.1}
42. MligTC455_11285 35 0.73 Mlig455_063382

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.476

 4.492 0.891 0.745 0.923 - 1.000 0.933 Mlig455_063382 {REF} {Length: 1652} {RNA1509_57098} {RNA1310_21560} {RNA815_54845}
43. MligTC455_31083 424 8.83 Mlig455_018370, Mlig455_069531

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.460

Region-specific R4: 5.746

Region-enriched R4: 4.107/0.00000

 4.491 0.896 0.725 0.975 - 0.998 0.897

Mlig455_018370 {REF} {Length: 1948} {RNA1509_21985, RNA1509_33368} {RNA1310_2341.1, RNA1509_21985, RNA1509_33368} {RNA1509_21985, RNA1509_33368, RNA815_677.1}

Mlig455_069531 {REF} {Length: 1913} {RNA1509_28690, RNA1509_3528} {RNA1310_2341.1, RNA1509_28690, RNA1509_3528} {RNA1509_28690, RNA1509_3528, RNA815_677.1}
44. MligTC455_46496 32 0.66 Mlig455_035359

Neo: -

Age: -

Region-enriched R4: 4.673/0.00015

 4.487 0.918 0.766 0.860 - 1.000 0.943 Mlig455_035359 {REF} {Length: 501} {RNA1509_8051} {RNA1310_43401} {RNA815_21326}
45. MligTC455_14429 424 8.82 Mlig455_068310

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.400

Region-enriched R4: 3.626/0.00014

Regeneration-downregulated R4: -3.235

Regeneration-depleted R4: -3.235

 4.486 0.889 0.714 0.902 - 0.994 0.987 Mlig455_068310 {REF} {Length: 783} {Pfam: EF-hand domain pair [PF13499.8, score=39.9]; EF-hand domain [PF13405.8, score=38.0]; EF hand [PF00036.34, score=34.1]; EF-hand domain pair [PF13833.8, score=29.4]; EF-hand domain [PF14658.8, score=21.7]} {RNA1509_16944, RNA1509_17070} {RNA1310_50236, RNA1509_17070} {RNA1509_17070, RNA815_24973}
46. MligTC455_08326 353 7.35 Mlig455_005158, Mlig455_021620

Neo: Irradiation

Age: Up-Down-Down

 TTLL10 4.484 0.847 0.726 0.950 - 0.990 0.971

Mlig455_005158 {REF} {Length: 2011} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=103.7]; YheC/D like ATP-grasp [PF14398.8, score=40.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=18.7]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=115, Expect=8e-27]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=114, Expect=2e-26]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=84.3, Expect=8e-17]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=129, Expect=7e-32]} {RNA1509_8225} {RNA1310_13837} {RNA815_5594}

Mlig455_021620 {REF} {Length: 2010} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=103.7]; YheC/D like ATP-grasp [PF14398.8, score=40.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=18.7]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=115, Expect=8e-27]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=114, Expect=2e-26]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=84.3, Expect=8e-17]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=129, Expect=7e-32]} {RNA1509_8225} {RNA1310_13837, RNA1509_8225} {RNA1509_8225, RNA815_5594}
47. MligTC455_11778 469 9.78 Mlig455_023663

Neo: -

Age: -

Region-specific R4: 5.673

Region-enriched R4: 3.586/0.00000

 HSBP1 4.484 0.900 0.712 0.927 - 0.988 0.957 Mlig455_023663 {REF} {Length: 877} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=46.5]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [Score=42.4, Expect=6e-06]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [Score=45.1, Expect=3e-07]} {Smed: dd_Smed_v6_1418_0_1, dd_Smed_v6_1418_0_1, [Score=43.1, Expect=1e-06]} {RNA1509_6254} {RNA1310_39822} {RNA815_20600.1}
48. MligTC455_20861 556 11.58 Mlig455_011587

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=-0.735

Region-specific R4: 6.311

Region-enriched R4: 4.575/0.00000

Regeneration-downregulated R4: -3.062

Regeneration-depleted R4: -3.062

 TPTEP2-CSNK1E 4.482 0.881 0.733 0.931 - 0.993 0.944 Mlig455_011587 {REF} {Length: 2450} {Pfam: Protein kinase domain [PF00069.27, score=52.2]; Fungal protein kinase [PF17667.3, score=19.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=18.4]} {Human: ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=84.7, Expect=7e-17]; ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=84.7, Expect=7e-17]; ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=84.7, Expect=7e-17]; ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=84.0, Expect=7e-17]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=85.1, Expect=4e-17]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=84.7, Expect=5e-17]; ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=84.0, Expect=4e-17]} {Dmel: FBgn0002413, dco, discs overgrown, [Score=80.5, Expect=1e-15]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [Score=84.3, Expect=2e-17]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [Score=85.5, Expect=1e-17]} {RNA1509_1420} {RNA1310_9575} {RNA815_2794.1}
49. MligTC455_21286 447 9.31 Mlig455_004286, Mlig455_004360

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.448

Region-specific R4: 5.908

Region-enriched R4: 2.387/0.01220

 4.476 0.822 0.717 0.983 - 0.984 0.970

Mlig455_004286 {REF} {Length: 1958} {RNA1509_28807, RNA1509_44927} {RNA1310_15297.1, RNA1509_44927} {RNA1509_44927, RNA815_30441}

Mlig455_004360 {REF} {Length: 1833} {RNA1509_28807} {RNA1310_15297.1} {RNA815_37116}
50. MligTC455_32302 270 5.62 Mlig455_017742

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.667

Region-enriched R4: 4.261/0.00000

 4.475 0.907 0.725 0.947 - 0.994 0.902 Mlig455_017742 {REF} {Length: 1490} {RNA1509_16007, RNA1509_48318} {RNA1310_26582, RNA1509_48318} {RNA1509_48318, RNA815_12838}
51. MligTC455_14681 354 7.38 Mlig455_039610

Neo: Irradiation

Age: Up-Down-Up

Region-specific R4: 5.889

Region-enriched R4: 3.229/0.02310

 4.475 0.891 0.727 0.924 - 0.948 0.985 Mlig455_039610 {REF} {Length: 848} {RNA1509_10622} {RNA1310_47546} {RNA815_23842}
52. MligTC455_33197 184 3.84 Mlig455_044537

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.897

Region-enriched R4: 4.010/0.00000

 4.472 0.836 0.733 0.986 - 0.991 0.926 Mlig455_044537 {REF} {Length: 1600} {RNA1509_7532} {RNA1310_21047} {RNA815_8887}
53. MligTC455_11331 16 0.34 Mlig455_057603

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.551/0.00719

 4.471 0.922 0.715 0.915 - 0.992 0.927 Mlig455_057603 {REF} {Length: 2457} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.0]} {RNA1509_7952} {RNA1310_7617} {RNA815_31120}
54. MligTC455_20862 1125 23.45 Mlig455_011509, Mlig455_050005

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.306

Region-specific R4: 5.812

Region-enriched R4: 4.726/0.00000

Regeneration-depleted R5: -3.574
Regeneration-depleted R3: -3.517
Regeneration-depleted R4: -3.216

 CSNK1E 4.469 0.877 0.733 0.926 - 0.993 0.940

Mlig455_011509 {REF} {Length: 2399} {Pfam: Protein kinase domain [PF00069.27, score=52.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=19.0]; Fungal protein kinase [PF17667.3, score=18.1]} {Human: ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=84.7, Expect=6e-17]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=84.7, Expect=6e-17]; ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=84.3, Expect=8e-17]; ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=83.6, Expect=7e-17]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=84.7, Expect=4e-17]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=84.3, Expect=5e-17]; ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=83.6, Expect=5e-17]} {Dmel: FBgn0002413, dco, discs overgrown, [Score=80.5, Expect=8e-16]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [Score=83.6, Expect=2e-17]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [Score=85.1, Expect=1e-17]} {RNA1509_1420} {RNA1310_9575} {RNA815_2794.1}

Mlig455_050005 {REF} {Length: 2537} {Pfam: Protein kinase domain [PF00069.27, score=52.2]; Fungal protein kinase [PF17667.3, score=19.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=18.4]} {Human: ENSG00000213923, CSNK1E, casein kinase 1 epsilon, [Score=85.1, Expect=5e-17]; ENSG00000283900, TPTEP2-CSNK1E, TPTEP2-CSNK1E readthrough, [Score=85.1, Expect=5e-17]; ENSG00000141551, CSNK1D, casein kinase 1 delta, [Score=84.7, Expect=7e-17]; ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [Score=84.0, Expect=7e-17]} {Mouse: ENSMUSG00000022433, Csnk1e, casein kinase 1, epsilon, [Score=85.1, Expect=3e-17]; ENSMUSG00000025162, Csnk1d, casein kinase 1, delta, [Score=84.7, Expect=5e-17]; ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [Score=84.0, Expect=5e-17]} {Dmel: FBgn0002413, dco, discs overgrown, [Score=80.5, Expect=9e-16]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [Score=84.3, Expect=2e-17]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [Score=85.1, Expect=1e-17]} {RNA1509_1420, RNA1509_15233, RNA1509_42023} {RNA1310_9575, RNA1509_1420, RNA1509_15233, RNA1509_42023} {RNA1509_1420, RNA1509_15233, RNA1509_42023, RNA815_2794.1}
55. MligTC455_52018 428 8.92 Mlig455_040873

Neo: -

Age: Up-Up-Down

Region-specific R4: 6.325

Region-enriched R4: 4.397/0.00000

 4.469 0.880 0.709 0.949 - 0.950 0.981 Mlig455_040873 {REF} {Length: 2242} {RNA1509_12853, RNA1509_33569, RNA1509_33693, RNA1509_39410, RNA1509_54038} {RNA1310_28066, RNA1509_12853, RNA1509_33569, RNA1509_33693, RNA1509_39410, RNA1509_54038} {RNA1509_12853, RNA1509_33569, RNA1509_33693, RNA1509_39410, RNA1509_54038, RNA815_15985}
56. MligTC455_50798 63 1.3 Mlig455_017810

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.336

Region-specific R4: 6.736

Region-enriched R4: 4.515/0.00020

 NEFM 4.462 0.844 0.769 0.957 - 0.984 0.908 Mlig455_017810 {REF} {Length: 2787} {Human: ENSG00000104722, NEFM, neurofilament medium, [Score=50.4, Expect=9e-06]} {Dmel: FBgn0053196, dpy, dumpy, [Score=53.9, Expect=6e-07]} {RNA1509_16831} {RNA1310_7404, RNA1509_16831} {RNA1509_16831, RNA815_2824.1}
57. MligTC455_03790 302 6.3 Mlig455_020857

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.454

Region-specific R4: 6.214

Region-enriched R4: 3.422/0.00001

 4.461 0.915 0.731 0.842 - 0.995 0.978 Mlig455_020857 {REF} {Length: 2247} {RNA1509_3809} {RNA1310_8284} {RNA815_18973}
58. MligTC455_37408 100 2.08 Mlig455_002393

Neo: Germline

Age: -

Region-specific R4: 6.150

Region-enriched R4: 3.508/0.00966

 4.459 0.934 0.730 0.817 - 0.993 0.985 Mlig455_002393 {REF} {Length: 4607} {RNA1509_51360, RNA1509_51417, RNA1509_7722} {RNA1310_2237.1, RNA1509_51417, RNA1509_7722} {RNA1509_51417, RNA1509_7722, RNA815_726.1}
59. MligTC455_49647 896 18.67 Mlig455_017625, Mlig455_058946

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.190

Region-enriched R4: 3.340/0.00000
Region-enriched R8: 2.371/0.03418

 4.447 0.843 0.701 0.940 - 0.982 0.981

Mlig455_017625 {REF} {Length: 2561} {TRANSSPLICED} {Dmel: FBgn0037325, CG12147, [Score=54.7, Expect=2e-07]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=48.9, Expect=7e-06]} {RNA1509_20215} {RNA1310_7475, RNA1509_20215} {RNA1509_20215, RNA815_3584.1}

Mlig455_058946 {REF} {Length: 2586} {TRANSSPLICED} {Dmel: FBgn0037325, CG12147, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00002203, kin-20, Casein kinase I isoform delta, [Score=48.9, Expect=5e-06]} {RNA1509_13478, RNA1509_31994, RNA1509_49202} {RNA1310_7475, RNA1509_13478, RNA1509_31994, RNA1509_49202} {RNA1509_13478, RNA1509_31994, RNA1509_49202, RNA815_3584.1}
60. MligTC455_15075 138 2.88 Mlig455_026601

Neo: Germline

Age: Up-Up-Down

Region-specific R4: 5.943

Region-enriched R4: 3.497/0.00000

 B3GNT6 4.446 0.848 0.721 0.937 - 0.999 0.941 Mlig455_026601 {REF} {Length: 3100} {Pfam: Galactosyltransferase [PF01762.23, score=45.1]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=63.2, Expect=2e-10]; ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=61.6, Expect=6e-10]; ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=61.2, Expect=1e-09]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=61.2, Expect=7e-10]; ENSMUSG00000022686, B3gnt5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=59.7, Expect=2e-09]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [Score=89.7, Expect=8e-20]} {RNA1509_8878} {RNA1310_14228.1} {RNA815_4876}
61. MligTC455_10278 80 1.66 Mlig455_045385

Neo: Irradiation

Age: logFC(26M/2M)=-0.489

Region-enriched R4: 3.490/0.00114

 4.443 0.889 0.745 0.908 - 0.987 0.914 Mlig455_045385 {REF} {Length: 1603} {Pfam: Integrase core domain [PF00665.28, score=37.6]} {RNA1509_29486} {RNA1310_21626, RNA1509_29486} {RNA1509_29486, RNA815_8923.1}
62. MligTC455_18703 599 12.48 Mlig455_001146, Mlig455_001308

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.968

Region-enriched R4: 3.603/0.00000

 4.442 0.876 0.733 0.901 - 0.947 0.985

Mlig455_001146 {REF} {Length: 1282} {Pfam: LIM domain [PF00412.24, score=69.1]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [Score=59.7, Expect=8e-10]} {RNA1509_11447} {RNA1310_28510} {RNA815_38402}

Mlig455_001308 {REF} {Length: 1285} {Pfam: LIM domain [PF00412.24, score=68.3]} {Celegans: WBGene00016197, pxl-1, Paxillin homolog 1, [Score=61.2, Expect=3e-10]} {RNA1509_11447} {RNA1310_28510, RNA1509_11447} {RNA1509_11447, RNA815_38402}
63. MligTC455_23783 1548 32.25 Mlig455_030310, Mlig455_034143

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.450

Region-enriched R4: 2.799/0.01946

Regeneration-downregulated TP: -8.972

Regeneration-depleted TP: -8.972

 4.44 0.880 0.720 0.862 - 0.997 0.981

Mlig455_030310 {REF} {Length: 2047} {RNA1509_5919} {RNA1310_15413} {RNA815_8132}

Mlig455_034143 {REF} {Length: 2038} {RNA1509_5919} {RNA1310_15413} {RNA815_8132}
64. MligTC455_03947 45 0.93 Mlig455_008448, Mlig455_031362

Neo: -

Age: -

 4.44 0.827 0.713 0.962 - 0.957 0.981

Mlig455_008448 {REF} {Length: 538} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}

Mlig455_031362 {REF} {Length: 838} {NoTransDecoderORF} {RNA1310_69781} {RNA815_48064}
65. MligTC455_07597 187 3.9 Mlig455_053540

Neo: Germline

Age: -

Region-specific R4: 6.022

Region-enriched R4: 3.921/0.00016

 4.436 0.785 0.743 0.992 - 0.992 0.924 Mlig455_053540 {REF} {Length: 757} {RNA1509_54735} {RNA1310_46097.1, RNA1509_54735} {RNA1509_54735, RNA815_53182}
66. MligTC455_24608 162 3.38 Mlig455_063917

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.804

Region-enriched R4: 4.013/0.00001

 4.436 0.895 0.706 0.959 - 0.991 0.885 Mlig455_063917 {REF} {Length: 3729} {RNA1509_24235, RNA1509_34605} {RNA1310_3011, RNA1509_24235, RNA1509_34605} {RNA1509_24235, RNA1509_34605, RNA815_901}
67. MligTC455_29598 865 18.01 Mlig455_025124, Mlig455_066048

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.432

Region-enriched R4: 3.282/0.00007

 4.433 0.877 0.733 0.858 - 0.981 0.984

Mlig455_025124 {REF} {Length: 1426} {RNA1509_22122} {RNA1310_29782.1, RNA1509_22122} {RNA1509_22122, RNA815_18060.2}

Mlig455_066048 {REF} {Length: 1423} {RNA1509_20150, RNA1509_22122, RNA1509_48320} {RNA1310_29782.1, RNA1509_20150, RNA1509_48320} {RNA1509_20150, RNA1509_48320, RNA815_18060.2}
68. MligTC455_18926 161 3.36 Mlig455_035673

Neo: Germline

Age: logFC(26M/2M)=0.461

 4.432 0.774 0.748 0.963 - 0.961 0.986 Mlig455_035673 {REF} {Length: 531} {RNA1509_17502} {RNA1310_59625} {RNA815_36809}
69. MligTC455_13013 85 1.77 Mlig455_004693, Mlig455_004768, Mlig455_004853

Neo: Germline

Age: -

Region-specific R4: 6.976

Region-enriched R4: 5.410/0.00002

 4.43 0.827 0.712 0.906 - 1.000 0.985

Mlig455_004693 {REF} {Length: 1041} {RNA1310_31968} {RNA815_34119}

Mlig455_004768 {REF} {Length: 930} {RNA1310_31968} {RNA815_42373}

Mlig455_004853 {REF} {Length: 1022} {NoTransDecoderORF} {RNA1310_31968} {RNA815_34119}
70. MligTC455_30015 118 2.46 Mlig455_064920, Mlig455_064948, Mlig455_066838

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.525/0.00021

 ABCA10 4.429 0.913 0.709 0.896 - 0.983 0.928

Mlig455_064920 {REF} {Length: 480} {Pfam: ABC transporter [PF00005.29, score=176.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=77.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=38.1]; ABC-2 family transporter protein [PF12698.9, score=35.7]; RsgA GTPase [PF03193.18, score=27.4]; P-loop containing region of AAA domain [PF13555.8, score=23.4]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=22.6]; AAA domain [PF13401.8, score=21.4]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]; AAA domain [PF13476.8, score=20.8]; MukB N-terminal [PF04310.14, score=18.4]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=227, Expect=2e-59]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=3e-57]} {Mouse: ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=214, Expect=1e-55]; ENSMUSG00000024130, Abca3, ATP-binding cassette, sub-family A (ABC1), member 3, [Score=213, Expect=3e-55]; ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=211, Expect=2e-54]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=210, Expect=2e-54]; ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=210, Expect=3e-54]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=209, Expect=8e-54]; ENSMUSG00000035722, Abca7, ATP-binding cassette, sub-family A (ABC1), member 7, [Score=206, Expect=8e-53]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=205, Expect=1e-52]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=205, Expect=1e-52]} {Dmel: FBgn0031170, CG1718, [Score=201, Expect=1e-51]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=207, Expect=1e-53]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=206, Expect=2e-53]} {RNA1509_56249} {RNA1310_27690} {RNA815_669.1}

Mlig455_064948 {REF} {Length: 5248} {Pfam: ABC transporter [PF00005.29, score=176.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=77.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=38.1]; ABC-2 family transporter protein [PF12698.9, score=35.7]; RsgA GTPase [PF03193.18, score=27.4]; P-loop containing region of AAA domain [PF13555.8, score=23.4]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=22.6]; AAA domain [PF13401.8, score=21.4]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]; AAA domain [PF13476.8, score=20.8]; MukB N-terminal [PF04310.14, score=18.4]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=227, Expect=2e-59]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=220, Expect=3e-57]} {Mouse: ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=214, Expect=1e-55]; ENSMUSG00000024130, Abca3, ATP-binding cassette, sub-family A (ABC1), member 3, [Score=213, Expect=3e-55]; ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=211, Expect=2e-54]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=210, Expect=2e-54]; ENSMUSG00000015243, Abca1, ATP-binding cassette, sub-family A (ABC1), member 1, [Score=210, Expect=3e-54]; ENSMUSG00000028125, Abca4, ATP-binding cassette, sub-family A (ABC1), member 4, [Score=209, Expect=8e-54]; ENSMUSG00000035722, Abca7, ATP-binding cassette, sub-family A (ABC1), member 7, [Score=206, Expect=8e-53]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=205, Expect=1e-52]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=205, Expect=1e-52]} {Dmel: FBgn0031170, CG1718, [Score=201, Expect=1e-51]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=207, Expect=1e-53]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=206, Expect=2e-53]} {RNA1509_10079} {RNA1310_1611} {RNA815_1686}

Mlig455_066838 {REF} {Length: 4431} {Pfam: ABC transporter [PF00005.29, score=182.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=78.9]; RecF/RecN/SMC N terminal domain [PF02463.21, score=38.0]; RsgA GTPase [PF03193.18, score=26.5]; P-loop containing region of AAA domain [PF13555.8, score=24.7]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=22.6]; ABC-2 family transporter protein [PF12698.9, score=21.9]; AAA domain [PF13476.8, score=21.3]; Domain of unknown function (DUF4162) [PF13732.8, score=21.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.9]; AAA domain [PF13401.8, score=19.6]; AAA ATPase domain [PF13175.8, score=19.3]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=229, Expect=5e-60]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=228, Expect=6e-60]; ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=223, Expect=4e-58]; ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=223, Expect=4e-58]; ENSG00000167972, ABCA3, ATP binding cassette subfamily A member 3, [Score=220, Expect=3e-57]} {Mouse: ENSMUSG00000062017, Abca14, ATP-binding cassette, sub-family A (ABC1), member 14, [Score=228, Expect=6e-60]; ENSMUSG00000024130, Abca3, ATP-binding cassette, sub-family A (ABC1), member 3, [Score=220, Expect=2e-57]} {Dmel: FBgn0031170, CG1718, [Score=211, Expect=1e-54]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=211, Expect=5e-55]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=199, Expect=2e-51]} {RNA1509_10079} {RNA1310_1611} {RNA815_669.1}
71. MligTC455_41886 216 4.51 Mlig455_004189

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.687

Region-enriched R4: 4.532/0.00001

 4.429 0.878 0.706 0.913 - 0.951 0.981 Mlig455_004189 {REF} {Length: 2965} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=75.9, Expect=4e-15]} {RNA1509_16009, RNA1509_43368} {RNA1310_21432, RNA1509_43368} {RNA1509_43368, RNA815_11018}
72. MligTC455_13654 90 1.88 Mlig455_055933

Neo: -

Age: Up-Down-Down

Region-specific R4: 6.071

Region-enriched R4: 4.143/0.00000

Regeneration-downregulated R4: -2.074

Regeneration-depleted R4: -2.074

 UFD1 4.427 0.784 0.716 0.949 - 0.992 0.986 Mlig455_055933 {REF} {Length: 1528} {Pfam: Ubiquitin fusion degradation protein UFD1 [PF03152.16, score=79.0]} {Human: ENSG00000070010, UFD1, ubiquitin recognition factor in ER associated degradation 1, [Score=76.3, Expect=5e-15]} {Mouse: ENSMUSG00000005262, Ufd1, ubiquitin recognition factor in ER-associated degradation 1, [Score=76.3, Expect=4e-15]} {Dmel: FBgn0036136, Ufd1-like, Ubiquitin fusion-degradation 1-like, [Score=77.0, Expect=2e-15]} {Celegans: WBGene00006733, ufd-1, Ubiquitin fusion degradation protein 1 homolog, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_2792_0_1, dd_Smed_v6_2792_0_1, [Score=88.6, Expect=7e-20]} {RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275} {RNA1310_24116, RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275} {RNA1509_21564, RNA1509_40979, RNA1509_50287, RNA1509_6275, RNA815_10490}
73. MligTC455_15675 579 12.07 Mlig455_038724, Mlig455_068418

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.399

Region-enriched R4: 5.037/0.00000

 4.427 0.912 0.704 0.905 - 0.939 0.967

Mlig455_038724 {REF} {Length: 1400} {RNA1509_7352} {RNA1310_23077} {RNA815_2959}

Mlig455_068418 {REF} {Length: 1484} {RNA1509_7352} {RNA1310_23077, RNA1509_7352} {RNA1509_7352, RNA815_2959}
74. MligTC455_31267 218 4.55 Mlig455_048585, Mlig455_048666, Mlig455_051622

Neo: -

Age: -

Region-specific R4: 6.688

Region-enriched R4: 4.506/0.00000
Region-enriched R3: 2.803/0.03006

 4.426 0.814 0.776 0.984 - 0.875 0.977

Mlig455_048585 {REF} {Length: 4575} {RNA1509_41432, RNA1509_52877} {RNA1310_5058.1, RNA1509_41432} {RNA1509_41432, RNA815_30060}

Mlig455_048666 {REF} {Length: 1528} {RNA1509_57689} {RNA1310_57587} {RNA815_30060}

Mlig455_051622 {REF} {Length: 919} {RNA1509_57689} {RNA1310_57587, RNA1509_57689} {RNA1509_57689, RNA815_30060}
75. MligTC455_35366 1803 37.55 Mlig455_053526, Mlig455_053527

Neo: Irradiation

Age: Down-Down-Down, logFC(26M/2M)=-0.801

Region-specific R4: 6.211

Region-enriched R4: 4.273/0.00000

 4.426 0.922 0.707 0.842 - 0.992 0.963

Mlig455_053526 {REF} {Length: 769} {Pfam: WSC domain [PF01822.21, score=42.8]} {RNA1509_1536} {RNA1310_39293.1} {RNA815_14338.1}

Mlig455_053527 {REF} {Length: 1183} {RNA1509_1536} {RNA1310_39293.1} {RNA815_14338.1}
76. MligTC455_35513 47 0.97 Mlig455_041036

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 6.304/0.00001

 4.424 0.796 0.718 0.950 - 1.000 0.960 Mlig455_041036 {REF} {Length: 1656} {RNA1509_8592} {RNA1310_43895.1, RNA1509_8592} {RNA1509_8592, RNA815_21669.1}
77. MligTC455_07059 239 4.97 Mlig455_038167

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.463

Region-specific R4: 5.903

Region-enriched R4: 3.991/0.00000

Regeneration-downregulated R4: -2.378

Regeneration-depleted R4: -2.378

 PPP1CA 4.423 0.825 0.750 0.863 - 0.999 0.986 Mlig455_038167 {REF} {Length: 2276} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=109.4]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=135, Expect=1e-34]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=134, Expect=2e-34]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=133, Expect=5e-34]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=135, Expect=7e-35]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=135, Expect=7e-35]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=134, Expect=1e-34]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=133, Expect=4e-34]} {Dmel: FBgn0261399, Pp1-Y1, Protein phosphatase 1, Y-linked 1, [Score=141, Expect=2e-37]} {Celegans: WBGene00001747, gsp-1, Serine/threonine-protein phosphatase PP1-alpha, [Score=136, Expect=1e-35]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=133, Expect=4e-35]} {RNA1509_36571} {RNA1310_24493} {RNA815_26608}
78. MligTC455_34676 709 14.78 Mlig455_025682

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.559

Region-enriched R4: 2.930/0.00006

 4.421 0.878 0.715 0.902 - 0.960 0.966 Mlig455_025682 {REF} {Length: 1628} {RNA1509_21371, RNA1509_52809, RNA1509_54172} {RNA1310_18872, RNA1509_21371, RNA1509_52809, RNA1509_54172} {RNA1509_21371, RNA1509_52809, RNA1509_54172, RNA815_10328}
79. MligTC455_08432 639 13.32 Mlig455_042603, Mlig455_042616, Mlig455_042649, Mlig455_042681

Neo: Irradiation

Age: -

Region-specific R4: 7.732

Region-enriched R4: 6.035/0.00000

 4.42 0.863 0.711 0.857 - 0.999 0.990

Mlig455_042603 {REF} {Length: 1528} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.1}

Mlig455_042616 {REF} {Length: 1016} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.1}

Mlig455_042649 {REF} {Length: 738} {RNA1509_12348} {RNA1310_34510} {RNA815_15637.2}

Mlig455_042681 {REF} {Length: 1630} {RNA1509_12348, RNA1509_59588} {RNA1310_34510, RNA1509_12348, RNA1509_59588} {RNA1509_12348, RNA1509_59588, RNA815_15637.1}
80. MligTC455_34453 24 0.5 Mlig455_052246

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.366/0.04841

 PPP1CA 4.42 0.832 0.768 0.920 - 0.989 0.911 Mlig455_052246 {REF} {Length: 1412} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=85.2]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=3e-48]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=161, Expect=2e-47]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=3e-46]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=160, Expect=4e-47]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=2e-46]} {Dmel: FBgn0005779, PpD6, Protein phosphatase D6, [Score=167, Expect=7e-50]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=166, Expect=7e-50]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=160, Expect=3e-48]} {RNA1509_8839} {RNA1310_6142.1} {RNA815_11327.2}
81. MligTC455_35370 3559 74.14 Mlig455_060928, Mlig455_060930, Mlig455_060931, Mlig455_060997

Neo: Germline

Age: Down-Up-Down, logFC(26M/2M)=2.350

Region-specific R4: 6.222

Region-enriched R4: 4.267/0.00000

 4.419 0.922 0.706 0.837 - 0.993 0.961

Mlig455_060928 {REF} {Length: 936} {RNA1509_1536} {RNA1310_39293.2} {RNA815_14338.1}

Mlig455_060930 {REF} {Length: 933} {RNA1509_1536} {RNA1310_39293.2} {RNA815_14338.1}

Mlig455_060931 {REF} {Length: 925} {RNA1509_1536} {RNA1310_39293.2} {RNA815_14338.1}

Mlig455_060997 {REF} {Length: 1061} {RNA1509_3731} {RNA1310_39293.2} {RNA815_14338.1}
82. MligTC455_25678 278 5.78 Mlig455_038616

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.304

Region-specific R4: 5.787

Region-enriched R4: 3.676/0.00000

Regeneration-depleted R4: -3.053

 4.417 0.894 0.700 0.901 - 0.936 0.986 Mlig455_038616 {REF} {Length: 872} {Pfam: Protocadherin [PF08374.13, score=26.7]; Domain of unknown function (DUF4834) [PF16118.7, score=22.4]; Protein melan-A [PF14991.8, score=19.9]; FAM176 family [PF14851.8, score=18.6]} {RNA1509_24238} {RNA1310_33288.1} {RNA815_18134.1}
83. MligTC455_50797 68 1.41 Mlig455_017800

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.732

Region-enriched R4: 4.948/0.00001

 NEFM 4.417 0.926 0.725 0.893 - 0.915 0.958 Mlig455_017800 {REF} {Length: 2914} {Human: ENSG00000104722, NEFM, neurofilament medium, [RH, Score=55.5, Expect=3e-07]} {RNA1509_16831, RNA1509_43018} {RNA1310_7404, RNA1509_43018} {RNA1509_43018, RNA815_2824.1}
84. MligTC455_35368 2244 46.75 Mlig455_053528, Mlig455_060929, Mlig455_060995

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.310

Region-enriched R4: 4.352/0.00000

 4.415 0.920 0.711 0.830 - 0.993 0.961

Mlig455_053528 {REF} {Length: 413} {NoTransDecoderORF} {RNA1509_3731} {RNA1310_39293.2} {RNA815_14338.1}

Mlig455_060929 {REF} {Length: 644} {NoTransDecoderORF} {RNA1509_1536} {RNA1310_39293.2} {RNA815_14338.1}

Mlig455_060995 {REF} {Length: 642} {NoTransDecoderORF} {RNA1509_3731} {RNA1310_39293.2} {RNA815_14338.1}
85. MligTC455_07338 156 3.25 Mlig455_005769, Mlig455_005815

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.546

Region-enriched R4: 4.841/0.00046

 4.414 0.719 0.747 0.962 - 0.999 0.987

Mlig455_005769 {REF} {Length: 1662} {RNA1509_46948} {RNA1310_47642, RNA1509_46948} {RNA1509_46948, RNA815_53017}

Mlig455_005815 {REF} {Length: 658} {RNA1509_46948} {RNA1310_47642} {RNA815_53017}
86. MligTC455_23395 295 6.14 Mlig455_043321, Mlig455_071004

Neo: -

Age: -

Region-specific R4: 6.346

Region-enriched R4: 3.305/0.00025

 4.414 0.896 0.708 0.895 - 0.948 0.967

Mlig455_043321 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}

Mlig455_071004 {REF} {Length: 980} {TRANSSPLICED} {Pfam: Homeodomain-like domain [PF13565.8, score=20.0]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
87. MligTC455_13497 523 10.9 Mlig455_062152, Mlig455_062182

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.334

Region-specific R4: 5.882

Region-enriched R4: 2.624/0.00327

 4.41 0.879 0.707 0.888 - 0.997 0.939

Mlig455_062152 {REF} {Length: 2739} {RNA1509_6423} {RNA1310_7074} {RNA815_3883.1}

Mlig455_062182 {REF} {Length: 2739} {RNA1509_6423} {RNA1310_7074, RNA1509_6423} {RNA1509_6423, RNA815_3883.1}
88. MligTC455_22117 447 9.32 Mlig455_012151, Mlig455_028946

Neo: Germline

Age: -

Region-specific R4: 5.270

Region-enriched R4: 3.340/0.00007

 4.409 0.913 0.716 0.862 - 0.938 0.980

Mlig455_012151 {REF} {Length: 2504} {RNA1509_26155} {RNA1310_11584, RNA1509_26155} {RNA1509_26155, RNA815_4599.1}

Mlig455_028946 {REF} {Length: 2224} {RNA1509_26155} {RNA1310_11584} {RNA815_4599.2}
89. MligTC455_34449 931 19.39 Mlig455_038512, Mlig455_052240

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.280

Region-enriched R4: 4.950/0.00000

 PPP1CA, PPP1CC 4.408 0.913 0.730 0.933 - 0.850 0.982

Mlig455_038512 {REF} {Length: 1435} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=6e-66]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=212, Expect=9e-66]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=9e-64]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=5e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=212, Expect=5e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=1e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=6e-64]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=3e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=218, Expect=3e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=4e-67]} {RNA1509_8839} {RNA1310_21841} {RNA815_11327.2}

Mlig455_052240 {REF} {Length: 1392} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=98.9]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=211, Expect=2e-65]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=1e-65]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=2e-63]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=211, Expect=9e-66]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=210, Expect=3e-65]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=206, Expect=1e-63]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=219, Expect=5e-69]} {Celegans: WBGene00004083, pph-1, Serine/threonine-protein phosphatase, [Score=217, Expect=6e-68]} {Smed: dd_Smed_v6_23492_0_1, dd_Smed_v6_23492_0_1, [Score=213, Expect=5e-67]} {RNA1509_14310, RNA1509_8839} {RNA1310_21841, RNA1509_14310} {RNA1509_14310, RNA815_11327.2}
90. MligTC455_39825 667 13.9 Mlig455_040858, Mlig455_066487

Neo: Irradiation

Age: -

Region-specific R4: 5.080

Region-enriched R4: 3.236/0.00001

 4.408 0.879 0.710 0.899 - 0.976 0.944

Mlig455_040858 {REF} {Length: 2612} {RNA1509_30797, RNA1509_5992} {RNA1310_18282, RNA1509_30797, RNA1509_5992} {RNA1509_30797, RNA1509_5992, RNA815_7824.1}

Mlig455_066487 {REF} {Length: 2184} {RNA1509_5992} {RNA1310_18282} {RNA815_7824.1}
91. MligTC455_23392 150 3.13 Mlig455_038970

Neo: -

Age: -

Region-specific R4: 6.409

Region-enriched R4: 3.786/0.00001

 4.405 0.896 0.709 0.915 - 0.918 0.967 Mlig455_038970 {REF} {Length: 1284} {Pfam: Homeodomain-like domain [PF13565.8, score=21.8]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [Score=43.5, Expect=2e-06]} {RNA1509_21915} {RNA1310_9985} {RNA815_5533.1}
92. MligTC455_48331 417 8.7 Mlig455_017102

Neo: Germline

Age: -

Region-specific R4: 5.847

Region-enriched R4: 3.617/0.00070

 KREMEN1 4.403 0.874 0.737 0.831 - 0.980 0.981 Mlig455_017102 {REF} {Length: 1266} {Pfam: WSC domain [PF01822.21, score=65.8]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=54.3, Expect=5e-09]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=46.6, Expect=2e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=1e-11]} {RNA1509_18753, RNA1509_20112} {RNA1310_46024, RNA1509_18753, RNA1509_20112} {RNA1509_18753, RNA1509_20112, RNA815_24313}
93. MligTC455_18940 307 6.39 Mlig455_058079

Neo: Germline

Age: -

Region-specific R4: 6.080

Region-enriched R4: 3.990/0.00000

 BOLL 4.402 0.928 0.703 0.863 - 0.931 0.977 Mlig455_058079 {REF} {Length: 3088} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.9]} {Human: ENSG00000152430, BOLL, boule homolog, RNA binding protein, [Score=101, Expect=2e-23]} {Mouse: ENSMUSG00000025977, Boll, boule homolog, RNA binding protein, [Score=99.0, Expect=1e-22]} {Dmel: FBgn0011206, bol, boule, [Score=82.0, Expect=7e-18]} {Celegans: WBGene00000935, daz-1, DAZ protein 1, [Score=80.9, Expect=4e-16]} {Smed: dd_Smed_v6_10611_0_2, dd_Smed_v6_10611_0_2, [Score=92.0, Expect=8e-22]} {RNA1509_15542, RNA1509_23321, RNA1509_23505, RNA1509_3633, RNA1509_54959, RNA1509_57457} {RNA1310_6494, RNA1509_15542, RNA1509_23321, RNA1509_23505, RNA1509_3633, RNA1509_54959, RNA1509_57457} {RNA1509_15542, RNA1509_23321, RNA1509_23505, RNA1509_3633, RNA1509_54959, RNA1509_57457, RNA815_2014}
94. MligTC455_34450 23 0.48 Mlig455_052287

Neo: -

Age: -

 PPP1CA 4.402 0.895 0.760 0.820 - 1.000 0.927 Mlig455_052287 {REF} {Length: 1273} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=83.4]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=8e-43]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=145, Expect=4e-42]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=6e-41]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=6e-43]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=6e-43]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=144, Expect=7e-42]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=4e-41]} {Dmel: FBgn0261399, Pp1-Y1, Protein phosphatase 1, Y-linked 1, [Score=148, Expect=8e-44]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=151, Expect=8e-45]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=144, Expect=8e-43]} {RNA1509_8839} {RNA1310_6142.1} {RNA815_11327.2}
95. MligTC455_09129 32 0.66 Mlig455_059421

Neo: Germline

Age: -

Region-enriched R4: 5.564/0.00001

 4.399 0.844 0.726 0.920 - 1.000 0.909 Mlig455_059421 {REF} {Length: 741} {RNA1509_46948} {RNA1310_47642} {RNA815_53017}
96. MligTC455_48541 1426 29.71 Mlig455_041406, Mlig455_060902

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.273
Region-specific R1: 4.600

Region-enriched R4: 4.076/0.00000

Regeneration-downregulated R4: -2.444

Regeneration-depleted R4: -2.444

 4.399 0.794 0.720 0.914 - 0.987 0.984

Mlig455_041406 {REF} {Length: 1474} {RNA1509_4026} {RNA1310_24415} {RNA815_28216}

Mlig455_060902 {REF} {Length: 1474} {RNA1509_4026} {RNA1310_24415} {RNA815_28216}
97. MligTC455_35369 461 9.6 Mlig455_060996

Neo: -

Age: logFC(26M/2M)=2.687

Region-specific R4: 6.251

Region-enriched R4: 3.966/0.00000

 4.395 0.912 0.721 0.805 - 0.995 0.962 Mlig455_060996 {REF} {Length: 991} {NoTransDecoderORF} {RNA1509_3731} {RNA1310_39293.2} {RNA815_14338.1}
98. MligTC455_17066 417 8.68 Mlig455_041052, Mlig455_041157, Mlig455_070081

Neo: Germline

Age: -

Region-specific R4: 5.790

Region-enriched R4: 4.468/0.00006

 4.394 0.742 0.733 0.938 - 1.000 0.981

Mlig455_041052 {REF} {Length: 719} {RNA1509_35811, RNA1509_43522, RNA1509_55338} {RNA1310_60877.2, RNA1509_35811, RNA1509_43522, RNA1509_55338} {RNA1509_35811, RNA1509_43522, RNA1509_55338, RNA815_32571.2}

Mlig455_041157 {REF} {Length: 625} {RNA1509_55338} {RNA1310_60877.2} {RNA815_32571.2}

Mlig455_070081 {REF} {Length: 602} {RNA1509_55338} {RNA1310_60877.2} {RNA815_32571.2}
99. MligTC455_50748 307 6.4 Mlig455_014883, Mlig455_038646

Neo: Germline

Age: -

Region-specific R4: 6.874

Region-enriched R4: 4.751/0.00000

 4.394 0.780 0.726 0.957 - 0.994 0.937

Mlig455_014883 {REF} {Length: 1366} {Pfam: Spt20 family [PF12090.10, score=18.7]} {RNA1509_22014} {RNA1310_40519.1} {RNA815_28353}

Mlig455_038646 {REF} {Length: 1303} {RNA1509_22014} {RNA1310_40519.1, RNA1509_22014} {RNA1509_22014, RNA815_28353}
100. MligTC455_50999 138 2.88 Mlig455_011626

Neo: Germline

Age: -

Region-specific R4: 6.249

Region-enriched R4: 5.077/0.00002

 4.394 0.773 0.724 0.940 - 0.993 0.964 Mlig455_011626 {REF} {Length: 1131} {RNA1509_26603} {RNA1310_28356} {RNA815_27303.1}

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