TomoSeq data search

Data search

Results for MligTC455_38346

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38346	78	1.62	Mlig455_055515	Neo: - Age: - Regeneration-upregulated R6: 6.622 Regeneration-enriched R6: 6.622		Mlig455_055515 {REF} {Length: 1834} {TRANSSPLICED} {RNA1509_30974} {RNA1310_33313, RNA1509_30974} {RNA1509_30974, RNA815_12408}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38346

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.922	1.535	0.99966	1.00000
RegionR2	2.158	1.535	0.20754	0.57038
RegionR3	1.806	1.535	0.17428	0.70102
RegionR4	0.558	1.535	0.48326	0.81090
RegionR5	2.853	1.535	0.01288	0.06958
RegionR6	-1.197	1.535	0.99974	1.00000
RegionR7	-1.584	1.535	0.99978	1.00000
RegionR8	-1.672	1.535	0.99980	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.715	1.535	0.99997	1.00000
RegenerationR2	2.591	1.535	0.02512	0.26171
RegenerationR3	4.153	1.535	0.00075	0.04220
RegenerationR4	4.182	1.535	0.00095	0.03381
RegenerationR5	2.697	1.535	0.00388	0.11159
RegenerationR6	6.622	1.535	0.00006	0.00661	Specific for R6: 6.622
RegenerationBL	1.323	1.535	0.99994	1.00000
RegenerationTP	6.941	1.535	0.00101	0.04787

Genes with expression patterns similar to MligTC455_38346

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38346	78	1.62	Mlig455_055515	Neo: - Age: - Regeneration-upregulated R6: 6.622 Regeneration-enriched R6: 6.622		4	1.000	-	-	1.000	1.000	1.000	Mlig455_055515 {REF} {Length: 1834} {TRANSSPLICED} {RNA1509_30974} {RNA1310_33313, RNA1509_30974} {RNA1509_30974, RNA815_12408}
2.	MligTC455_20175	294	6.12	Mlig455_005758	Neo: - Age: Down-Up-Down	PLEKHD1	0.964	-	-	-	0.964	-	-	Mlig455_005758 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=46.6]} {Human: ENSG00000175985, PLEKHD1, pleckstrin homology and coiled-coil domain containing D1, [RH, Score=134, Expect=6e-34]} {Mouse: ENSMUSG00000066438, Plekhd1, pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, [RH, Score=134, Expect=6e-34]} {Smed: dd_Smed_v6_3737_0_1, dd_Smed_v6_3737_0_1, [RH, Score=175, Expect=7e-50]} {RNA1509_16240, RNA1509_17876, RNA1509_41234, RNA1509_59092} {RNA1310_12965, RNA1509_16240, RNA1509_41234, RNA1509_59092} {RNA1509_16240, RNA1509_41234, RNA1509_59092, RNA815_14309.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38346

1.62

Mlig455_055515

Neo: -

Age: -

Regeneration-upregulated R6: 6.622

Regeneration-enriched R6: 6.622

1.000

Mlig455_055515 {REF} {Length: 1834} {TRANSSPLICED} {RNA1509_30974} {RNA1310_33313, RNA1509_30974} {RNA1509_30974, RNA815_12408}

MligTC455_20175

294

6.12

Mlig455_005758

Neo: -

Age: Down-Up-Down

PLEKHD1

0.964

Mlig455_005758 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=46.6]} {Human: ENSG00000175985, PLEKHD1, pleckstrin homology and coiled-coil domain containing D1, [RH, Score=134, Expect=6e-34]} {Mouse: ENSMUSG00000066438, Plekhd1, pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, [RH, Score=134, Expect=6e-34]} {Smed: dd_Smed_v6_3737_0_1, dd_Smed_v6_3737_0_1, [RH, Score=175, Expect=7e-50]} {RNA1509_16240, RNA1509_17876, RNA1509_41234, RNA1509_59092} {RNA1310_12965, RNA1509_16240, RNA1509_41234, RNA1509_59092} {RNA1509_16240, RNA1509_41234, RNA1509_59092, RNA815_14309.1}