Data search


search
Exact
Search

Results for MligTC455_38360

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38360 419 8.73 Mlig455_037409

Neo: -

Age: -

Region-enriched R2: 2.090/0.03453

Mlig455_037409 {REF} {Length: 6496} {Pfam: piRNA pathway germ-plasm component [PF13017.8, score=54.7]} {RNA1509_20544} {RNA1310_10724} {RNA815_9287}

Cumulative graph for MligTC455_38360

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.513 3.541 0.62725 1.00000
RegionR2 2.09 3.541 0.00196 0.03453
RegionR3 0.989 3.541 0.11921 0.59756
RegionR4 0.89 3.541 0.21110 0.49567
RegionR5 1.194 3.541 0.03530 0.14556
RegionR6 1.186 3.541 0.06112 0.46375
RegionR7 0.239 3.541 0.67163 1.00000
RegionR8 -7.1 3.541 0.00131 0.05666

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.277 3.541 0.30938 1.00000
RegenerationR2 -0.234 3.541 0.57786 0.90580
RegenerationR3 0.441 3.541 0.36534 0.78021
RegenerationR4 0.304 3.541 0.54974 0.89271
RegenerationR5 0.479 3.541 0.25837 0.68973
RegenerationR6 0.228 3.541 0.65796 0.90224
RegenerationBL 3.538 3.541 0.00047 0.01345
RegenerationTP 4.531 3.541 0.00051 0.03206


Genes with expression patterns similar to MligTC455_38360

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38360 419 8.73 Mlig455_037409

Neo: -

Age: -

Region-enriched R2: 2.090/0.03453

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037409 {REF} {Length: 6496} {Pfam: piRNA pathway germ-plasm component [PF13017.8, score=54.7]} {RNA1509_20544} {RNA1310_10724} {RNA815_9287}
2. MligTC455_29554 1359 28.32 Mlig455_002957, Mlig455_064499, Mlig455_064518, Mlig455_066058

Neo: -

Age: logFC(26M/2M)=-0.326

Region-enriched R4: 2.472/0.00363

MTSS1 1.793 - - - - 0.956 0.837

Mlig455_002957 {REF} {Length: 316} {NoTransDecoderORF}

Mlig455_064499 {REF} {Length: 3945} {TRANSSPLICED} {Pfam: IRSp53/MIM homology domain [PF08397.13, score=134.0]} {Human: ENSG00000170873, MTSS1, MTSS1, I-BAR domain containing, [RH, Score=192, Expect=2e-52]; ENSG00000132613, MTSS1L, MTSS1L, I-BAR domain containing, [RH, Score=189, Expect=2e-51]} {Mouse: ENSMUSG00000022353, Mtss1, metastasis suppressor 1, [RH, Score=192, Expect=1e-52]; ENSMUSG00000033763, Mtss1l, metastasis suppressor 1-like, [RH, Score=188, Expect=2e-51]} {Dmel: FBgn0053558, mim, missing-in-metastasis, [RH, Score=183, Expect=8e-49]} {Celegans: WBGene00019771, M04F3.5, [RH, Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_6612_0_2, dd_Smed_v6_6612_0_2, [RH, Score=191, Expect=2e-52]} {RNA1509_6299} {RNA1310_5911.1} {RNA815_8674}

Mlig455_064518 {REF} {Length: 4577} {TRANSSPLICED} {Pfam: IRSp53/MIM homology domain [PF08397.13, score=134.0]} {Human: ENSG00000170873, MTSS1, MTSS1, I-BAR domain containing, [RH, Score=192, Expect=2e-52]; ENSG00000132613, MTSS1L, MTSS1L, I-BAR domain containing, [RH, Score=189, Expect=2e-51]} {Mouse: ENSMUSG00000022353, Mtss1, metastasis suppressor 1, [RH, Score=192, Expect=1e-52]; ENSMUSG00000033763, Mtss1l, metastasis suppressor 1-like, [RH, Score=188, Expect=3e-51]} {Dmel: FBgn0053558, mim, missing-in-metastasis, [RH, Score=183, Expect=1e-48]} {Celegans: WBGene00019771, M04F3.5, [RH, Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_6612_0_2, dd_Smed_v6_6612_0_2, [RH, Score=191, Expect=2e-52]} {RNA1509_6299} {RNA1310_5911.1} {RNA815_8674}

Mlig455_066058 {REF} {Length: 4575} {TRANSSPLICED} {Pfam: IRSp53/MIM homology domain [PF08397.13, score=134.0]} {Human: ENSG00000170873, MTSS1, MTSS1, I-BAR domain containing, [RH, Score=192, Expect=2e-52]; ENSG00000132613, MTSS1L, MTSS1L, I-BAR domain containing, [RH, Score=189, Expect=2e-51]} {Mouse: ENSMUSG00000022353, Mtss1, metastasis suppressor 1, [RH, Score=192, Expect=1e-52]; ENSMUSG00000033763, Mtss1l, metastasis suppressor 1-like, [RH, Score=189, Expect=1e-51]} {Dmel: FBgn0053558, mim, missing-in-metastasis, [RH, Score=183, Expect=8e-49]} {Celegans: WBGene00019771, M04F3.5, [RH, Score=105, Expect=2e-23]} {Smed: dd_Smed_v6_6612_0_1, dd_Smed_v6_6612_0_1, [RH, Score=190, Expect=4e-52]} {RNA1509_22345, RNA1509_31666, RNA1509_6299} {RNA1310_5911.1, RNA1509_22345, RNA1509_31666, RNA1509_6299} {RNA1509_22345, RNA1509_31666, RNA1509_6299, RNA815_8674}
3. MligTC455_14690 94 1.96 Mlig455_051489

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.630

0.97 - - - - 0.970 - Mlig455_051489 {REF} {Length: 1211} {Pfam: Lectin C-type domain [PF00059.23, score=36.1]} {Smed: dd_Smed_v6_84586_0_1, dd_Smed_v6_84586_0_1, [Score=49.7, Expect=6e-08]} {RNA1310_38414.2} {RNA815_44971}
4. MligTC455_46707 2865 59.69 Mlig455_063531

Neo: Int S/G2/M

Age: -

PSMD3 0.959 - - - - 0.959 - Mlig455_063531 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: Proteasome regulatory subunit C-terminal [PF08375.13, score=80.2]; PCI domain [PF01399.29, score=76.7]} {Human: ENSG00000108344, PSMD3, proteasome 26S subunit, non-ATPase 3, [RH, Score=431, Expect=1e-146]} {Mouse: ENSMUSG00000017221, Psmd3, proteasome (prosome, macropain) 26S subunit, non-ATPase, 3, [RH, Score=432, Expect=8e-147]} {Dmel: FBgn0261396, Rpn3, Regulatory particle non-ATPase 3, [RH, Score=416, Expect=2e-141]} {Celegans: WBGene00004460, rpn-3, 26S proteasome non-ATPase regulatory subunit 3, [RH, Score=300, Expect=3e-96]} {Smed: dd_Smed_v6_1449_0_1, dd_Smed_v6_1449_0_1, [RH, Score=463, Expect=4e-160]} {RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198} {RNA1310_10547, RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198} {RNA1509_13721, RNA1509_14671, RNA1509_2187, RNA1509_26100, RNA1509_45198, RNA815_3693}
5. MligTC455_43641 1815 37.81 Mlig455_012350, Mlig455_012727

Neo: -

Age: -

0.952 0.952 - - - - -

Mlig455_012350 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.8]} {RNA1509_12109} {RNA1310_16228, RNA1509_12109} {RNA1509_12109, RNA815_15191}

Mlig455_012727 {REF} {Length: 4556} {Pfam: Immunoglobulin V-set domain [PF07686.19, score=19.5]} {RNA1509_12109, RNA1509_48222} {RNA1310_16228, RNA1509_48222} {RNA1509_48222, RNA815_15191}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA