TomoSeq data search

Data search

Results for MligTC455_38367

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38367

121

2.52

Mlig455_016425

Neo: -

Age: -

AASDH

Mlig455_016425 {REF} {Length: 3715} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=95.2]; PQQ-like domain [PF13570.8, score=63.4]; PQQ-like domain [PF13360.8, score=58.9]; PQQ enzyme repeat [PF01011.23, score=21.1]} {Human: ENSG00000157426, AASDH, aminoadipate-semialdehyde dehydrogenase, [RH, Score=114, Expect=5e-25]} {Mouse: ENSMUSG00000055923, Aasdh, aminoadipate-semialdehyde dehydrogenase, [RH, Score=110, Expect=6e-24]} {Dmel: FBgn0027780, U26, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00012356, W09D6.1, [RH, Score=102, Expect=8e-22]} {RNA1509_52907, RNA1509_58312, RNA1509_59714} {RNA1310_6718, RNA1509_52907, RNA1509_58312} {RNA1509_52907, RNA1509_58312, RNA815_916}

Cumulative graph for MligTC455_38367

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.567	2.096	1.00000	1.00000
RegionR2	2.84	2.096	0.06236	0.30112
RegionR3	2.715	2.096	0.03952	0.34613
RegionR4	2.308	2.096	0.05754	0.21187
RegionR5	2.171	2.096	0.08649	0.27629
RegionR6	2.546	2.096	0.06052	0.46193
RegionR7	-3.099	2.096	0.99977	1.00000
RegionR8	-3.913	2.096	0.99974	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.428	2.096	0.99998	1.00000
RegenerationR2	0.962	2.096	0.24031	0.68807
RegenerationR3	0.448	2.096	0.62663	0.91870
RegenerationR4	-0.214	2.096	0.84727	1.00000
RegenerationR5	0.683	2.096	0.43442	0.82111
RegenerationR6	1.408	2.096	0.12388	0.43266
RegenerationBL	4.93	2.096	0.00126	0.02658
RegenerationTP	6.051	2.096	0.00458	0.11255

Genes with expression patterns similar to MligTC455_38367

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38367	121	2.52	Mlig455_016425	Neo: - Age: -	AASDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016425 {REF} {Length: 3715} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=95.2]; PQQ-like domain [PF13570.8, score=63.4]; PQQ-like domain [PF13360.8, score=58.9]; PQQ enzyme repeat [PF01011.23, score=21.1]} {Human: ENSG00000157426, AASDH, aminoadipate-semialdehyde dehydrogenase, [RH, Score=114, Expect=5e-25]} {Mouse: ENSMUSG00000055923, Aasdh, aminoadipate-semialdehyde dehydrogenase, [RH, Score=110, Expect=6e-24]} {Dmel: FBgn0027780, U26, [RH, Score=108, Expect=1e-23]} {Celegans: WBGene00012356, W09D6.1, [RH, Score=102, Expect=8e-22]} {RNA1509_52907, RNA1509_58312, RNA1509_59714} {RNA1310_6718, RNA1509_52907, RNA1509_58312} {RNA1509_52907, RNA1509_58312, RNA815_916}
2.	MligTC455_34462	54	1.13	Mlig455_033965, Mlig455_058027	Neo: Neoblast Age: -	CELF3	0.986	-	-	-	-	-	0.986	Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]} Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}
3.	MligTC455_19878	674	14.04	Mlig455_025244, Mlig455_025266, Mlig455_025621	Neo: - Age: Up-Down-Up Region-enriched R6: 4.115/0.00000 Region-enriched R7: 3.098/0.01198 Regeneration-upregulated BL: 3.728 Regeneration-enriched BL: 3.728	ASCL4	0.962	-	-	-	-	-	0.962	Mlig455_025244 {REF} {Length: 2889} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.3]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=68.2, Expect=3e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=2e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.0, Expect=5e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.6, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=63.2, Expect=2e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=80.9, Expect=8e-19]} {RNA1509_60112} {RNA1310_16083} {RNA815_25636.1} Mlig455_025266 {REF} {Length: 1966} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.5]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.8, Expect=4e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=3e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.0, Expect=6e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=61.6, Expect=8e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=79.3, Expect=3e-18]} {RNA1509_60112} {RNA1310_16083} {RNA815_25636.1} Mlig455_025621 {REF} {Length: 1718} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.1]} {Human: ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.8, Expect=4e-13]; ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=3e-12]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=66.6, Expect=6e-13]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=66.2, Expect=1e-12]} {Dmel: FBgn0000022, ac, achaete, [RH, Score=66.2, Expect=1e-12]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=62.8, Expect=3e-11]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [RH, Score=79.3, Expect=3e-18]} {RNA1509_60112} {RNA1310_20032, RNA1509_60112} {RNA1509_60112, RNA815_25636.1}
4.	MligTC455_50164	30	0.62	Mlig455_042298	Neo: - Age: -	LRRC70	0.957	-	-	0.957	-	-	-	Mlig455_042298 {REF} {Length: 2101} {Pfam: Leucine rich repeat [PF13855.8, score=55.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=27.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.2]} {Human: ENSG00000186105, LRRC70, leucine rich repeat containing 70, [Score=50.1, Expect=7e-06]; ENSG00000137462, TLR2, toll like receptor 2, [Score=48.9, Expect=5e-06]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=50.1, Expect=4e-06]} {Dmel: FBgn0031100, CG1504, [Score=49.3, Expect=5e-06]} {RNA1310_10677} {RNA815_5552}
5.	MligTC455_11987	43	0.9	Mlig455_012008, Mlig455_022685	Neo: - Age: - Regeneration-enriched R6: 8.534 Regeneration-enriched R3: 8.344 Regeneration-enriched R4: 7.509 Regeneration-enriched BL: 7.064 Regeneration-enriched R5: 6.739		0.95	-	-	-	-	0.950	-	Mlig455_012008 {REF} {Length: 3823} {RNA1509_49089} {RNA1310_64037, RNA1509_49089} Mlig455_022685 {REF} {Length: 3764} {RNA1509_49089} {RNA1310_64037}

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