Data search
Results for MligTC455_38375
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38375 | 15 | 0.31 | Mlig455_057694 | Neo: - Age: - |
GRIK1 | Mlig455_057694 {REF} {Length: 3194} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=76.1]; Ligand-gated ion channel [PF00060.28, score=70.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=41.5]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=177, Expect=2e-45]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=177, Expect=1e-45]} {Dmel: FBgn0038837, CG3822, [Score=161, Expect=1e-40]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=146, Expect=1e-35]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=155, Expect=9e-39]} {RNA1509_5426} {RNA1310_4549.1} {RNA815_1227.1} |
Cumulative graph for MligTC455_38375
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_38375
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38375 | 15 | 0.31 | Mlig455_057694 | Neo: - Age: - |
GRIK1 | 1 | - | - | 1.000 | - | - | - | Mlig455_057694 {REF} {Length: 3194} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=76.1]; Ligand-gated ion channel [PF00060.28, score=70.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=41.5]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=177, Expect=2e-45]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=177, Expect=1e-45]} {Dmel: FBgn0038837, CG3822, [Score=161, Expect=1e-40]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=146, Expect=1e-35]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=155, Expect=9e-39]} {RNA1509_5426} {RNA1310_4549.1} {RNA815_1227.1} |
| 2. | MligTC455_35612 | 108 | 2.24 | Mlig455_028477, Mlig455_028502 | Neo: - Age: - |
0.972 | - | - | 0.972 | - | - | - | Mlig455_028477 {REF} {Length: 3097} {NoTransDecoderORF} {RNA1509_51981} {RNA1310_26650.1} {RNA815_19295} Mlig455_028502 {REF} {Length: 756} {NoTransDecoderORF} {RNA1509_5585} {RNA1310_103270} {RNA815_19295} |
|
| 3. | MligTC455_21331 | 24 | 0.51 | Mlig455_020847 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_020847 {REF} {Length: 1646} {RNA1509_46103} {RNA1310_42929} {RNA815_8813.1} |
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