Data search
Results for MligTC455_38377
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38377 | 830 | 17.28 | Mlig455_059981 | Neo: - Age: - |
GRIK1 | Mlig455_059981 {REF} {Length: 3445} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=76.0]; Ligand-gated ion channel [PF00060.28, score=71.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=39.9]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=178, Expect=2e-45]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=178, Expect=9e-46]} {Dmel: FBgn0038837, CG3822, [Score=160, Expect=3e-40]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=148, Expect=3e-36]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=153, Expect=6e-38]} {RNA1509_19881, RNA1509_5426} {RNA1310_4549.1, RNA1509_19881, RNA1509_5426} {RNA1509_19881, RNA1509_5426, RNA815_1227.1} |
Cumulative graph for MligTC455_38377
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.228 | 4.334 | 0.01999 | 0.39084 | |
| RegionR2 | 1.33 | 4.334 | 0.04001 | 0.23226 | |
| RegionR3 | 0.365 | 4.334 | 0.65295 | 1.00000 | |
| RegionR4 | 0.982 | 4.334 | 0.18219 | 0.45335 | |
| RegionR5 | 0.691 | 4.334 | 0.36918 | 0.72181 | |
| RegionR6 | 1.449 | 4.334 | 0.00972 | 0.16571 | |
| RegionR7 | 0.507 | 4.334 | 0.57676 | 1.00000 | |
| RegionR8 | 1.905 | 4.334 | 0.01161 | 0.20551 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.05 | 4.334 | 0.04972 | 0.69740 | |
| RegenerationR2 | 0.275 | 4.334 | 0.31916 | 0.75743 | |
| RegenerationR3 | 0.435 | 4.334 | 0.21891 | 0.65532 | |
| RegenerationR4 | -0.165 | 4.334 | 0.63509 | 0.92526 | |
| RegenerationR5 | -0.61 | 4.334 | 0.06952 | 0.41442 | |
| RegenerationR6 | -0.337 | 4.334 | 0.30311 | 0.65230 | |
| RegenerationBL | 0.146 | 4.334 | 0.70674 | 1.00000 | |
| RegenerationTP | -0.841 | 4.334 | 0.09810 | 0.48952 |
Genes with expression patterns similar to MligTC455_38377
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38377 | 830 | 17.28 | Mlig455_059981 | Neo: - Age: - |
GRIK1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059981 {REF} {Length: 3445} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=76.0]; Ligand-gated ion channel [PF00060.28, score=71.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=39.9]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=178, Expect=2e-45]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=178, Expect=9e-46]} {Dmel: FBgn0038837, CG3822, [Score=160, Expect=3e-40]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=148, Expect=3e-36]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=153, Expect=6e-38]} {RNA1509_19881, RNA1509_5426} {RNA1310_4549.1, RNA1509_19881, RNA1509_5426} {RNA1509_19881, RNA1509_5426, RNA815_1227.1} |
| 2. | MligTC455_33408 | 1038 | 21.62 | Mlig455_012763, Mlig455_021162 | Neo: - Age: logFC(26M/2M)=-0.559 |
1.794 | - | - | - | 0.970 | 0.824 | - | Mlig455_012763 {REF} {Length: 6676} {Smed: dd_Smed_v6_3146_0_1, dd_Smed_v6_3146_0_1, [Score=65.5, Expect=3e-10]} {RNA1509_3500} {RNA1310_1118.1} {RNA815_307} Mlig455_021162 {REF} {Length: 6599} {Smed: dd_Smed_v6_3146_0_1, dd_Smed_v6_3146_0_1, [Score=65.5, Expect=3e-10]} {RNA1509_3500} {RNA1310_1118.1} {RNA815_307} |
|
| 3. | MligTC455_46739 | 450 | 9.38 | Mlig455_002971 | Neo: - Age: - |
NMNAT1 | 1.691 | - | - | - | - | 0.725 | 0.966 | Mlig455_002971 {REF} {Length: 3453} {TRANSSPLICED} {Pfam: Cytidylyltransferase-like [PF01467.28, score=29.1]} {Human: ENSG00000173614, NMNAT1, nicotinamide nucleotide adenylyltransferase 1, [Score=140, Expect=5e-38]} {Mouse: ENSMUSG00000028992, Nmnat1, nicotinamide nucleotide adenylyltransferase 1, [Score=137, Expect=6e-37]} {Dmel: FBgn0039254, Nmnat, Nicotinamide mononucleotide adenylyltransferase, [Score=130, Expect=7e-34]} {Celegans: WBGene00012295, nmat-1, Nicotinamide-nucleotide adenylyltransferase, [Score=52.8, Expect=9e-08]} {Smed: dd_Smed_v6_5656_0_1, dd_Smed_v6_5656_0_1, [Score=120, Expect=2e-31]} {RNA1509_56526} {RNA1310_12468} {RNA815_3099} |
| 4. | MligTC455_24317 | 706 | 14.7 | Mlig455_003065, Mlig455_062828 | Neo: - Age: Down-Up-Down |
ANK2 | 1.679 | - | 0.724 | - | - | 0.955 | - | Mlig455_003065 {REF} {Length: 2378} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.1]; Ankyrin repeats (many copies) [PF13637.8, score=90.9]; Ankyrin repeat [PF00023.32, score=77.1]; Ankyrin repeat [PF13606.8, score=67.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.4]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=57.0, Expect=8e-08]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=57.0, Expect=1e-07]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=55.8, Expect=2e-07]} {Mouse: ENSMUSG00000015468, Notch4, notch 4, [Score=59.7, Expect=1e-08]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=57.8, Expect=4e-08]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=52.8, Expect=9e-07]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=65.1, Expect=7e-11]} {RNA1509_26538} {RNA1310_11708, RNA1509_26538} {RNA1509_26538, RNA815_16205.1} Mlig455_062828 {REF} {Length: 2457} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.1]; Ankyrin repeats (many copies) [PF13637.8, score=90.9]; Ankyrin repeat [PF00023.32, score=77.1]; Ankyrin repeat [PF13606.8, score=67.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.4]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=57.0, Expect=8e-08]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=57.0, Expect=1e-07]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=55.8, Expect=2e-07]} {Mouse: ENSMUSG00000015468, Notch4, notch 4, [Score=59.7, Expect=1e-08]; ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=57.8, Expect=4e-08]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=52.8, Expect=9e-07]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.8, Expect=2e-06]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=65.1, Expect=7e-11]} {RNA1509_26538} {RNA1310_11708} {RNA815_16205.1} |
| 5. | MligTC455_43365 | 157 | 3.27 | Mlig455_019023 | Neo: - |
TNN | 0.982 | 0.982 | - | - | - | - | - | Mlig455_019023 {REF} {Length: 2388} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=92.4, Expect=2e-20]; ENSG00000229353, TNXB, tenascin XB, [Score=91.3, Expect=7e-20]; ENSG00000166482, MFAP4, microfibril associated protein 4, [Score=91.3, Expect=5e-21]; ENSG00000236236, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000206258, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000233323, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000231608, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000168477, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=88.6, Expect=1e-19]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.0, Expect=2e-20]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=91.3, Expect=4e-20]; ENSMUSG00000042436, Mfap4, microfibrillar-associated protein 4, [Score=88.6, Expect=2e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=85.5, Expect=2e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_25852} {RNA1310_16471.3, RNA1509_25852} {RNA1509_25852, RNA815_7229.1} |
| 6. | MligTC455_33802 | 659 | 13.73 | Mlig455_033383 | Neo: - Age: logFC(26M/2M)=-0.359 |
0.954 | 0.954 | - | - | - | - | - | Mlig455_033383 {REF} {Length: 3524} {RNA1509_14410, RNA1509_56133} {RNA1310_8398, RNA1509_56133} {RNA1509_56133, RNA815_14639} | |
| 7. | MligTC455_38454 | 837 | 17.44 | Mlig455_044385 | Neo: - Age: - |
NPC1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_044385 {REF} {Length: 5388} {Pfam: Patched family [PF02460.20, score=275.0]; Niemann-Pick C1 N terminus [PF16414.7, score=206.8]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=173.3]; MMPL family [PF03176.17, score=25.3]} {Human: ENSG00000141458, NPC1, NPC intracellular cholesterol transporter 1, [RH, Score=1039, Expect=0.0]} {Mouse: ENSMUSG00000024413, Npc1, NPC intracellular cholesterol transporter 1, [RH, Score=1021, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=959, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Niemann-Pick C1 protein homolog 1, [Score=505, Expect=9e-156]} {Smed: dd_Smed_v6_5175_0_1, dd_Smed_v6_5175_0_1, [RH, Score=1048, Expect=0.0]} {RNA1509_2275} {RNA1310_1514.1, RNA1509_2275} {RNA1509_2275, RNA815_976} |
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