Data search


search
Exact
Search

Results for MligTC455_38475

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38475 2345 48.85 Mlig455_045696

Neo: Int S/G2/M

Age: -

PSMD13 Mlig455_045696 {REF} {Length: 2303} {Pfam: PCI domain [PF01399.29, score=47.7]} {Human: ENSG00000185627, PSMD13, proteasome 26S subunit, non-ATPase 13, [RH, Score=314, Expect=2e-104]} {Mouse: ENSMUSG00000025487, Psmd13, proteasome (prosome, macropain) 26S subunit, non-ATPase, 13, [RH, Score=313, Expect=2e-104]} {Dmel: FBgn0028691, Rpn9, Regulatory particle non-ATPase 9, [RH, Score=307, Expect=5e-102]} {Celegans: WBGene00004465, rpn-9, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=261, Expect=7e-84]} {Smed: dd_Smed_v6_1913_0_1, dd_Smed_v6_1913_0_1, [RH, Score=276, Expect=4e-90]} {RNA1509_24410, RNA1509_4537} {RNA1310_21874, RNA1509_24410, RNA1509_4537} {RNA1509_24410, RNA1509_4537, RNA815_4801.1}

Cumulative graph for MligTC455_38475

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.293 5.792 0.59201 1.00000
RegionR2 0.318 5.792 0.29915 0.68791
RegionR3 0.455 5.792 0.06667 0.45640
RegionR4 0.516 5.792 0.05852 0.21443
RegionR5 0.442 5.792 0.04667 0.17854
RegionR6 0.043 5.792 0.86564 1.00000
RegionR7 -0.586 5.792 0.05818 0.46294
RegionR8 -0.895 5.792 0.01838 0.26301

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.818 5.792 0.37890 1.00000
RegenerationR2 -0.02 5.792 0.94440 1.00000
RegenerationR3 0.175 5.792 0.56470 0.89148
RegenerationR4 -0.327 5.792 0.27793 0.72320
RegenerationR5 -0.049 5.792 0.86493 1.00000
RegenerationR6 0.341 5.792 0.27300 0.62281
RegenerationBL 0.759 5.792 0.02611 0.17807
RegenerationTP 0.902 5.792 0.01482 0.20840


Genes with expression patterns similar to MligTC455_38475

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38475 2345 48.85 Mlig455_045696

Neo: Int S/G2/M

Age: -

PSMD13 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045696 {REF} {Length: 2303} {Pfam: PCI domain [PF01399.29, score=47.7]} {Human: ENSG00000185627, PSMD13, proteasome 26S subunit, non-ATPase 13, [RH, Score=314, Expect=2e-104]} {Mouse: ENSMUSG00000025487, Psmd13, proteasome (prosome, macropain) 26S subunit, non-ATPase, 13, [RH, Score=313, Expect=2e-104]} {Dmel: FBgn0028691, Rpn9, Regulatory particle non-ATPase 9, [RH, Score=307, Expect=5e-102]} {Celegans: WBGene00004465, rpn-9, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=261, Expect=7e-84]} {Smed: dd_Smed_v6_1913_0_1, dd_Smed_v6_1913_0_1, [RH, Score=276, Expect=4e-90]} {RNA1509_24410, RNA1509_4537} {RNA1310_21874, RNA1509_24410, RNA1509_4537} {RNA1509_24410, RNA1509_4537, RNA815_4801.1}
2. MligTC455_48003 1369 28.52 Mlig455_023573

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.282

Region-enriched R4: 1.213/0.00104

PSMD2 3.21 - 0.793 0.745 0.951 - 0.721 Mlig455_023573 {REF} {Length: 4290} {Pfam: RPN1 N-terminal domain [PF17781.3, score=361.6]; 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal [PF18051.3, score=105.9]; Proteasome/cyclosome repeat [PF01851.24, score=61.4]} {Human: ENSG00000175166, PSMD2, proteasome 26S subunit, non-ATPase 2, [RH, Score=901, Expect=0.0]} {Mouse: ENSMUSG00000006998, Psmd2, proteasome (prosome, macropain) 26S subunit, non-ATPase, 2, [RH, Score=896, Expect=0.0]} {Dmel: FBgn0028695, Rpn1, Regulatory particle non-ATPase 1, [RH, Score=848, Expect=0.0]} {Celegans: WBGene00004458, rpn-1, Proteasome Regulatory Particle, Non-ATPase-like, [RH, Score=809, Expect=0.0]} {Smed: dd_Smed_v6_2481_0_1, dd_Smed_v6_2481_0_1, [RH, Score=950, Expect=0.0]} {RNA1509_1075, RNA1509_18419, RNA1509_42254} {RNA1310_3428, RNA1509_18419, RNA1509_42254} {RNA1509_18419, RNA1509_42254, RNA815_1690}
3. MligTC455_47854 943 19.64 Mlig455_000418, Mlig455_000482, Mlig455_024864

Neo: -

Age: -

Region-enriched R5: 1.458/0.00824

1.806 - - - 0.962 - 0.844

Mlig455_000418 {REF} {Length: 2568} {RNA1509_31527} {RNA1310_21890} {RNA815_29334}

Mlig455_000482 {REF} {Length: 3278} {TRANSSPLICED} {Pfam: Peroxin-3 [PF04882.14, score=65.3]} {Dmel: FBgn0036484, Pex3, Peroxin 3, [RH, Score=68.9, Expect=2e-12]} {RNA1509_31527} {RNA1310_21890} {RNA815_20801}

Mlig455_024864 {REF} {Length: 2276} {TRANSSPLICED} {Pfam: Peroxin-3 [PF04882.14, score=65.5]} {Dmel: FBgn0036484, Pex3, Peroxin 3, [RH, Score=68.9, Expect=2e-12]} {RNA1509_31527} {RNA1310_21890, RNA1509_31527} {RNA1509_31527, RNA815_20801}
4. MligTC455_39537 847 17.64 Mlig455_043925

Neo: -

Age: -

Region-enriched R4: 1.204/0.02719

ACTR2 1.725 - - - 0.957 - 0.768 Mlig455_043925 {REF} {Length: 4431} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=324.1]} {Human: ENSG00000138071, ACTR2, ARP2 actin related protein 2 homolog, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000020152, Actr2, ARP2 actin-related protein 2, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0011742, Arp2, Actin-related protein 2, [RH, Score=648, Expect=0.0]} {Celegans: WBGene00000200, arx-2, Actin-related protein 2, [RH, Score=601, Expect=0.0]} {Smed: dd_Smed_v6_623_0_1, dd_Smed_v6_623_0_1, [RH, Score=634, Expect=0.0]} {RNA1509_10489, RNA1509_21141, RNA1509_23327} {RNA1310_24490, RNA1509_10489, RNA1509_21141, RNA1509_23327} {RNA1509_10489, RNA1509_21141, RNA1509_23327, RNA815_9307}
5. MligTC455_14474 4337 90.35 Mlig455_040064

Neo: -

Age: -

0.974 - - - 0.974 - - Mlig455_040064 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_12533} {RNA1310_13559.1} {RNA815_5097.1}
6. MligTC455_38389 4773 99.44 Mlig455_028828, Mlig455_028848

Neo: -

Age: -

CD81, CD9 0.963 - - - - - 0.963

Mlig455_028828 {REF} {Length: 1301} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=124.4]} {Human: ENSG00000010278, CD9, CD9 molecule, [Score=84.7, Expect=2e-19]; ENSG00000134198, TSPAN2, tetraspanin 2, [Score=80.9, Expect=5e-18]; ENSG00000110651, CD81, CD81 molecule, [Score=80.9, Expect=6e-18]} {Mouse: ENSMUSG00000030342, Cd9, CD9 antigen, [Score=92.8, Expect=1e-22]} {Dmel: FBgn0027865, Tsp96F, Tetraspanin 96F, [Score=99.4, Expect=7e-25]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=74.3, Expect=5e-16]} {Smed: dd_Smed_v6_2693_0_1, dd_Smed_v6_2693_0_1, [Score=117, Expect=3e-32]} {RNA1509_51162} {RNA1310_21663} {RNA815_9250.1}

Mlig455_028848 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Tetraspanin family [PF00335.22, score=122.7]} {Human: ENSG00000110651, CD81, CD81 molecule, [Score=82.4, Expect=1e-18]; ENSG00000010278, CD9, CD9 molecule, [Score=79.3, Expect=2e-17]} {Mouse: ENSMUSG00000030342, Cd9, CD9 antigen, [Score=87.4, Expect=1e-20]} {Dmel: FBgn0027865, Tsp96F, Tetraspanin 96F, [Score=93.6, Expect=9e-23]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=68.9, Expect=5e-14]} {Smed: dd_Smed_v6_4080_0_1, dd_Smed_v6_4080_0_1, [Score=115, Expect=1e-31]} {RNA1509_51162} {RNA1310_21663, RNA1509_51162} {RNA1509_51162, RNA815_9250.1}
7. MligTC455_52133 341 7.11 Mlig455_025446

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.327

TMEM115 0.953 - - - 0.953 - - Mlig455_025446 {REF} {Length: 3102} {Pfam: Eukaryotic integral membrane protein (DUF1751) [PF08551.12, score=84.5]} {Human: ENSG00000126062, TMEM115, transmembrane protein 115, [RH, Score=186, Expect=4e-55]} {Mouse: ENSMUSG00000010045, Tmem115, transmembrane protein 115, [RH, Score=177, Expect=2e-51]} {Dmel: FBgn0031818, CG9536, [RH, Score=207, Expect=4e-62]} {Celegans: WBGene00008687, F11A10.6, [RH, Score=112, Expect=7e-28]} {Smed: dd_Smed_v6_2967_0_1, dd_Smed_v6_2967_0_1, [RH, Score=221, Expect=8e-69]} {RNA1509_9371} {RNA1310_13090.1} {RNA815_12988.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA