Data search
Results for MligTC455_38509
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38509 | 280 | 5.82 | Mlig455_051024 | Neo: - Age: - |
Mlig455_051024 {REF} {Length: 2915} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=25.9]} {RNA1509_59358} {RNA1310_14095.1, RNA1509_59358} {RNA1509_59358, RNA815_3495.1} |
Cumulative graph for MligTC455_38509
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.507 | 2.862 | 0.24142 | 0.88859 | |
| RegionR2 | 1.589 | 2.862 | 0.00578 | 0.07076 | |
| RegionR3 | -0.304 | 2.862 | 0.52938 | 1.00000 | |
| RegionR4 | -1.074 | 2.862 | 0.03273 | 0.14445 | |
| RegionR5 | 0.022 | 2.862 | 0.95665 | 1.00000 | |
| RegionR6 | 0.114 | 2.862 | 0.81339 | 1.00000 | |
| RegionR7 | -0.32 | 2.862 | 0.67190 | 1.00000 | |
| RegionR8 | 1.48 | 2.862 | 0.03367 | 0.36077 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.327 | 2.862 | 0.51236 | 1.00000 | |
| RegenerationR2 | 0.01 | 2.862 | 0.98083 | 1.00000 | |
| RegenerationR3 | 0.347 | 2.862 | 0.53522 | 0.87457 | |
| RegenerationR4 | 0.156 | 2.862 | 0.76362 | 0.97415 | |
| RegenerationR5 | 0.193 | 2.862 | 0.66547 | 0.93838 | |
| RegenerationR6 | 0.007 | 2.862 | 0.99088 | 1.00000 | |
| RegenerationBL | -1.278 | 2.862 | 0.15938 | 0.47827 | |
| RegenerationTP | 0.03 | 2.862 | 0.96698 | 1.00000 |
Genes with expression patterns similar to MligTC455_38509
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38509 | 280 | 5.82 | Mlig455_051024 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051024 {REF} {Length: 2915} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=25.9]} {RNA1509_59358} {RNA1310_14095.1, RNA1509_59358} {RNA1509_59358, RNA815_3495.1} | |
| 2. | MligTC455_17603 | 88 | 1.83 | Mlig455_051492, Mlig455_051530 | Neo: - Age: - Region-enriched R5: 3.673/0.00764 |
1.699 | - | - | 0.955 | - | 0.744 | - | Mlig455_051492 {REF} {Length: 584} {NoTransDecoderORF} {RNA1310_18616} Mlig455_051530 {REF} {Length: 990} {NoTransDecoderORF} {RNA1310_18616} |
|
| 3. | MligTC455_19941 | 222 | 4.62 | Mlig455_045624 | Neo: - |
RNPS1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_045624 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.0]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=8e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=8e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=104, Expect=5e-26]} {RNA1509_14792} {RNA1310_28374} {RNA815_13087} |
| 4. | MligTC455_29795 | 1641 | 34.19 | Mlig455_046954 | Neo: - Age: - |
DDX39B | 0.95 | - | - | - | - | - | 0.950 | Mlig455_046954 {REF} {Length: 1734} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_16673} {RNA1310_11845} {RNA815_6753} |
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