TomoSeq data search

Data search

Results for MligTC455_38632

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38632

1589

33.10

Mlig455_015723

Neo: -

Age: -

Region-enriched R4: 1.082/0.00793

RNF126

Mlig455_015723 {REF} {Length: 2980} {Pfam: Ring finger domain [PF13639.8, score=51.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=44.3]; RING-H2 zinc finger domain [PF12678.9, score=38.8]; RING-like zinc finger [PF17123.7, score=34.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.5]; RING-type zinc-finger [PF13445.8, score=30.2]; zinc-ribbon [PF14369.8, score=28.8]; zinc-RING finger domain [PF14634.8, score=24.8]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=22.6]} {Human: ENSG00000070423, RNF126, ring finger protein 126, [Score=95.9, Expect=2e-22]; ENSG00000265491, RNF115, ring finger protein 115, [Score=95.5, Expect=2e-22]} {Mouse: ENSMUSG00000028098, Rnf115, ring finger protein 115, [Score=97.1, Expect=4e-23]; ENSMUSG00000035890, Rnf126, ring finger protein 126, [Score=96.7, Expect=6e-23]} {Dmel: FBgn0037653, CG11982, [Score=98.6, Expect=2e-23]} {Celegans: WBGene00021842, Y54E10BR.3, [RH, Score=66.2, Expect=2e-12]} {Smed: dd_Smed_v6_1180_0_1, dd_Smed_v6_1180_0_1, [Score=84.0, Expect=3e-19]} {RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588} {RNA1310_19281, RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588} {RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588, RNA815_13232.1}

Cumulative graph for MligTC455_38632

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.488	5.177	0.43012	1.00000
RegionR2	-0.046	5.177	0.89256	1.00000
RegionR3	-0.194	5.177	0.50298	0.99540
RegionR4	1.082	5.177	0.00071	0.00793
RegionR5	-0.007	5.177	0.97946	1.00000
RegionR6	-0.374	5.177	0.20224	0.77490
RegionR7	-0.446	5.177	0.20547	0.81589
RegionR8	-0.502	5.177	0.23275	0.84689

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.962	5.177	0.29659	0.99329
RegenerationR2	0.158	5.177	0.61888	0.92290
RegenerationR3	0.046	5.177	0.89667	1.00000
RegenerationR4	-0.94	5.177	0.00757	0.12804
RegenerationR5	0.007	5.177	0.98339	1.00000
RegenerationR6	-0.11	5.177	0.76591	0.95926
RegenerationBL	-1.15	5.177	0.01661	0.13689
RegenerationTP	0.577	5.177	0.15600	0.58382

Genes with expression patterns similar to MligTC455_38632

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38632	1589	33.1	Mlig455_015723	Neo: - Age: - Region-enriched R4: 1.082/0.00793	RNF126	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015723 {REF} {Length: 2980} {Pfam: Ring finger domain [PF13639.8, score=51.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=44.3]; RING-H2 zinc finger domain [PF12678.9, score=38.8]; RING-like zinc finger [PF17123.7, score=34.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.5]; RING-type zinc-finger [PF13445.8, score=30.2]; zinc-ribbon [PF14369.8, score=28.8]; zinc-RING finger domain [PF14634.8, score=24.8]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=22.6]} {Human: ENSG00000070423, RNF126, ring finger protein 126, [Score=95.9, Expect=2e-22]; ENSG00000265491, RNF115, ring finger protein 115, [Score=95.5, Expect=2e-22]} {Mouse: ENSMUSG00000028098, Rnf115, ring finger protein 115, [Score=97.1, Expect=4e-23]; ENSMUSG00000035890, Rnf126, ring finger protein 126, [Score=96.7, Expect=6e-23]} {Dmel: FBgn0037653, CG11982, [Score=98.6, Expect=2e-23]} {Celegans: WBGene00021842, Y54E10BR.3, [RH, Score=66.2, Expect=2e-12]} {Smed: dd_Smed_v6_1180_0_1, dd_Smed_v6_1180_0_1, [Score=84.0, Expect=3e-19]} {RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588} {RNA1310_19281, RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588} {RNA1509_32414, RNA1509_36842, RNA1509_38841, RNA1509_39217, RNA1509_5588, RNA815_13232.1}
2.	MligTC455_38631	1548	32.24	Mlig455_015717	Neo: - Age: - Region-enriched R4: 1.162/0.00471	RNF115	5.819	0.999	0.998	0.999	0.990	0.834	0.999	Mlig455_015717 {REF} {Length: 2792} {Pfam: Ring finger domain [PF13639.8, score=51.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=43.5]; RING-H2 zinc finger domain [PF12678.9, score=39.1]; RING-like zinc finger [PF17123.7, score=34.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.4]; RING-type zinc-finger [PF13445.8, score=30.1]; zinc-ribbon [PF14369.8, score=28.8]; zinc-RING finger domain [PF14634.8, score=24.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=22.4]} {Human: ENSG00000265491, RNF115, ring finger protein 115, [Score=95.9, Expect=2e-22]; ENSG00000070423, RNF126, ring finger protein 126, [Score=95.9, Expect=9e-23]} {Mouse: ENSMUSG00000028098, Rnf115, ring finger protein 115, [Score=97.1, Expect=3e-23]; ENSMUSG00000035890, Rnf126, ring finger protein 126, [Score=96.3, Expect=8e-23]} {Dmel: FBgn0037653, CG11982, [Score=99.8, Expect=6e-24]} {Celegans: WBGene00021842, Y54E10BR.3, [RH, Score=66.2, Expect=2e-12]} {Smed: dd_Smed_v6_1180_0_1, dd_Smed_v6_1180_0_1, [Score=85.5, Expect=7e-20]} {RNA1509_32414, RNA1509_41894, RNA1509_59617} {RNA1310_19281, RNA1509_41894, RNA1509_59617} {RNA1509_41894, RNA1509_59617, RNA815_13232.1}
3.	MligTC455_39490	1269	26.44	Mlig455_051772	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.330	PFKFB2	1.706	-	-	-	0.754	-	0.952	Mlig455_051772 {REF} {Length: 3813} {Pfam: 6-phosphofructo-2-kinase [PF01591.20, score=286.7]; Histidine phosphatase superfamily (branch 1) [PF00300.24, score=140.0]; AAA domain [PF13671.8, score=28.4]; Chromatin associated protein KTI12 [PF08433.12, score=21.5]} {Human: ENSG00000123836, PFKFB2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=520, Expect=0.0]; ENSG00000158571, PFKFB1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=509, Expect=7e-177]; ENSG00000170525, PFKFB3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=505, Expect=3e-174]; ENSG00000114268, PFKFB4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=496, Expect=7e-172]} {Mouse: ENSMUSG00000026409, Pfkfb2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=518, Expect=2e-180]; ENSMUSG00000025271, Pfkfb1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=511, Expect=4e-178]; ENSMUSG00000026773, Pfkfb3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=509, Expect=1e-175]; ENSMUSG00000025648, Pfkfb4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=498, Expect=2e-172]} {Dmel: FBgn0027621, Pfrx, 6-phosphofructo-2-kinase, [RH, Score=489, Expect=7e-166]} {Celegans: WBGene00022456, pfkb-1.1, [RH, Score=498, Expect=2e-173]} {Smed: dd_Smed_v6_3959_0_1, dd_Smed_v6_3959_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_1275} {RNA1310_3213.1, RNA1509_1275} {RNA1509_1275, RNA815_2671.1}
4.	MligTC455_43779	878	18.3	Mlig455_041635	Neo: - Age: Up-Down-Up Region-enriched R4: 1.074/0.03063	WDR45	0.961	-	-	-	-	-	0.961	Mlig455_041635 {REF} {Length: 2705} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=216, Expect=1e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=219, Expect=7e-68]} {Dmel: FBgn0037648, CG11975, [Score=162, Expect=1e-46]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583} {RNA1310_6509.1} {RNA815_2908}
5.	MligTC455_53206	1500	31.25	Mlig455_050751	Neo: - Age: -	WASHC2C	0.961	-	-	-	-	-	0.961	Mlig455_050751 {REF} {Length: 6565} {TRANSSPLICED} {Pfam: Cornifin (SPRR) family [PF02389.17, score=27.8]} {Human: ENSG00000172661, WASHC2C, WASH complex subunit 2C, [RH, Score=154, Expect=4e-37]; ENSG00000099290, WASHC2A, WASH complex subunit 2A, [RH, Score=154, Expect=3e-37]} {Mouse: ENSMUSG00000024104, Washc2, WASH complex subunit 2`, [RH, Score=160, Expect=4e-39]} {Smed: dd_Smed_v6_3045_0_1, dd_Smed_v6_3045_0_1, [RH, Score=130, Expect=2e-30]} {RNA1509_15626, RNA1509_18962, RNA1509_25256, RNA1509_32419, RNA1509_41029, RNA1509_46567, RNA1509_56097} {RNA1310_3749, RNA1509_15626, RNA1509_18962, RNA1509_25256, RNA1509_32419, RNA1509_41029, RNA1509_46567, RNA1509_56097} {RNA1509_15626, RNA1509_18962, RNA1509_25256, RNA1509_32419, RNA1509_41029, RNA1509_46567, RNA1509_56097, RNA815_12544}
6.	MligTC455_39489	698	14.55	Mlig455_026756	Neo: - Age: logFC(26M/2M)=-0.314	PFKFB2	0.959	-	-	-	0.959	-	-	Mlig455_026756 {REF} {Length: 4142} {Pfam: 6-phosphofructo-2-kinase [PF01591.20, score=286.7]; Histidine phosphatase superfamily (branch 1) [PF00300.24, score=140.0]; AAA domain [PF13671.8, score=28.4]; Chromatin associated protein KTI12 [PF08433.12, score=21.5]} {Human: ENSG00000123836, PFKFB2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=520, Expect=0.0]; ENSG00000158571, PFKFB1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=509, Expect=7e-177]; ENSG00000170525, PFKFB3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=505, Expect=3e-174]; ENSG00000114268, PFKFB4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=496, Expect=7e-172]} {Mouse: ENSMUSG00000026409, Pfkfb2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=518, Expect=2e-180]; ENSMUSG00000025271, Pfkfb1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=511, Expect=4e-178]; ENSMUSG00000026773, Pfkfb3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=509, Expect=1e-175]; ENSMUSG00000025648, Pfkfb4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=498, Expect=2e-172]} {Dmel: FBgn0027621, Pfrx, 6-phosphofructo-2-kinase, [RH, Score=489, Expect=7e-166]} {Celegans: WBGene00022456, pfkb-1.1, [RH, Score=498, Expect=2e-173]} {Smed: dd_Smed_v6_3959_0_1, dd_Smed_v6_3959_0_1, [RH, Score=522, Expect=0.0]} {RNA1509_1275} {RNA1310_3213.1} {RNA815_2671.1}
7.	MligTC455_43778	880	18.33	Mlig455_041613	Neo: - Age: - Region-enriched R4: 1.061/0.03397	WDR45	0.957	-	-	-	-	-	0.957	Mlig455_041613 {REF} {Length: 2756} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=214, Expect=8e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=216, Expect=5e-67]} {Dmel: FBgn0037648, CG11975, [Score=163, Expect=8e-47]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583, RNA1509_29232} {RNA1310_6509.1, RNA1509_10583, RNA1509_29232} {RNA1509_10583, RNA1509_29232, RNA815_2908}
8.	MligTC455_46812	2137	44.51	Mlig455_070901	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_070901 {REF} {Length: 607} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32181} {RNA1310_32218} {RNA815_9391.2}
9.	MligTC455_28812	856	17.84	Mlig455_009153	Neo: - Age: -	PKM	0.952	-	-	-	-	-	0.952	Mlig455_009153 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=314.3]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=108.1]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [Score=390, Expect=7e-129]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [Score=388, Expect=5e-128]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [Score=419, Expect=2e-140]} {Celegans: WBGene00014001, pyk-2, Pyruvate kinase, [Score=390, Expect=2e-129]} {Smed: dd_Smed_v6_1511_0_1, dd_Smed_v6_1511_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_23306, RNA1509_3400, RNA1509_53441} {RNA1310_12700, RNA1509_23306, RNA1509_3400, RNA1509_53441} {RNA1509_23306, RNA1509_3400, RNA1509_53441, RNA815_4151.1}

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