Data search
Results for MligTC455_38649
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38649 | 366 | 7.62 | Mlig455_017548, Mlig455_030858 | Neo: Irradiation Age: logFC(26M/2M)=0.956 Region-enriched R4: 3.015/0.00105 |
Mlig455_017548 {REF} {Length: 2244} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=68.9, Expect=5e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1} Mlig455_030858 {REF} {Length: 2242} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=68.9, Expect=5e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1} |
Cumulative graph for MligTC455_38649
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.307 | 3.54 | 0.31519 | 0.96483 | |
| RegionR2 | 2.087 | 3.54 | 0.01061 | 0.10462 | |
| RegionR3 | 0.719 | 3.54 | 0.29805 | 0.84059 | |
| RegionR4 | 3.015 | 3.54 | 0.00006 | 0.00105 | |
| RegionR5 | -0.992 | 3.54 | 0.97402 | 1.00000 | |
| RegionR6 | 0.205 | 3.54 | 0.61810 | 1.00000 | |
| RegionR7 | -6.769 | 3.54 | 0.00061 | 0.02384 | |
| RegionR8 | 0.427 | 3.54 | 0.56084 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.536 | 3.54 | 0.42309 | 1.00000 | |
| RegenerationR2 | -1.595 | 3.54 | 0.01238 | 0.18163 | |
| RegenerationR3 | -1.341 | 3.54 | 0.06290 | 0.42310 | |
| RegenerationR4 | -2.39 | 3.54 | 0.00076 | 0.02921 | |
| RegenerationR5 | -2.03 | 3.54 | 0.01280 | 0.19842 | |
| RegenerationR6 | -2.255 | 3.54 | 0.00679 | 0.10060 | |
| RegenerationBL | -0.404 | 3.54 | 0.82087 | 1.00000 | |
| RegenerationTP | 0.966 | 3.54 | 0.52072 | 0.91456 |
Genes with expression patterns similar to MligTC455_38649
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38649 | 366 | 7.62 | Mlig455_017548, Mlig455_030858 | Neo: Irradiation Age: logFC(26M/2M)=0.956 Region-enriched R4: 3.015/0.00105 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017548 {REF} {Length: 2244} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=68.9, Expect=5e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1} Mlig455_030858 {REF} {Length: 2242} {Dmel: FBgn0011705, rost, rolling stone, [RH, Score=68.9, Expect=5e-13]} {RNA1509_29979} {RNA1310_35196} {RNA815_13054.1} |
|
| 2. | MligTC455_27359 | 117 | 2.43 | Mlig455_052864 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.823/0.00051 |
SLCO4A1 | 3.313 | - | 0.723 | - | 0.954 | 0.750 | 0.886 | Mlig455_052864 {REF} {Length: 2384} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=290.1]; Major Facilitator Superfamily [PF07690.18, score=61.0]} {Human: ENSG00000101187, SLCO4A1, solute carrier organic anion transporter family member 4A1, [Score=242, Expect=2e-73]} {Mouse: ENSMUSG00000038963, Slco4a1, solute carrier organic anion transporter family, member 4a1, [Score=244, Expect=3e-73]} {Dmel: FBgn0051634, Oatp26F, Organic anion transporting polypeptide 26F, [Score=214, Expect=2e-62]} {Celegans: WBGene00013499, Y70G10A.3, Solute carrier organic anion transporter family member, [Score=184, Expect=8e-52]} {Smed: dd_Smed_v6_88451_0_1, dd_Smed_v6_88451_0_1, [Score=96.3, Expect=7e-24]} {RNA1509_21099} {RNA1310_14516} {RNA815_28402} |
| 3. | MligTC455_45575 | 207 | 4.31 | Mlig455_044728 | Neo: Irradiation |
FMN2 | 2.761 | 0.971 | 0.908 | - | - | - | 0.882 | Mlig455_044728 {REF} {Length: 5162} {Pfam: Formin Homology 2 Domain [PF02181.25, score=219.8]} {Human: ENSG00000155816, FMN2, formin 2, [RH, Score=217, Expect=3e-56]} {Mouse: ENSMUSG00000028354, Fmn2, formin 2, [RH, Score=212, Expect=4e-55]} {Dmel: FBgn0000256, capu, cappuccino, [Score=176, Expect=5e-44]} {Celegans: WBGene00018976, daam-1, DAAM (Disheveled-Associated Activator of Morphogenesis) homolog, [Score=108, Expect=1e-23]} {Smed: dd_Smed_v6_15344_0_1, dd_Smed_v6_15344_0_1, [RH, Score=125, Expect=7e-29]} {RNA1509_48189} {RNA1310_14808} {RNA815_7378} |
| 4. | MligTC455_12087 | 94 | 1.97 | Mlig455_028142, Mlig455_063570 | Neo: - Age: Down-Down-Down |
SNAI2 | 2.548 | - | 0.804 | - | - | 0.794 | 0.950 | Mlig455_028142 {REF} {Length: 1403} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.9]; Zinc-finger double domain [PF13465.8, score=59.7]; C2H2-type zinc finger [PF13894.8, score=55.9]; C2H2-type zinc finger [PF13912.8, score=40.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.5]; Zinc-finger of C2H2 type [PF12874.9, score=30.3]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=27.5]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [Score=182, Expect=4e-57]; ENSG00000185669, SNAI3, snail family transcriptional repressor 3, [Score=177, Expect=1e-54]; ENSG00000124216, SNAI1, snail family transcriptional repressor 1, [Score=173, Expect=2e-53]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [Score=182, Expect=3e-57]; ENSMUSG00000042821, Snai1, snail family zinc finger 1, [Score=176, Expect=1e-54]; ENSMUSG00000006587, Snai3, snail family zinc finger 3, [Score=173, Expect=3e-53]} {Dmel: FBgn0001983, wor, worniu, [Score=179, Expect=3e-53]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=137, Expect=6e-41]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [Score=179, Expect=6e-56]} {RNA1509_43471} {RNA1310_31295.1} {RNA815_31028} Mlig455_063570 {REF} {Length: 2075} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=82.3]; C2H2-type zinc finger [PF13894.8, score=65.4]; Zinc-finger double domain [PF13465.8, score=58.7]; C2H2-type zinc finger [PF13912.8, score=37.3]; Zinc-finger of C2H2 type [PF12874.9, score=36.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=35.1]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=29.3]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [Score=197, Expect=1e-60]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [Score=197, Expect=9e-61]} {Dmel: FBgn0001983, wor, worniu, [Score=194, Expect=4e-57]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=148, Expect=3e-43]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [Score=189, Expect=1e-57]} {RNA1509_43471} {RNA1310_31295.1} {RNA815_31028} |
| 5. | MligTC455_38794 | 57 | 1.19 | Mlig455_060981 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.282 Region-specific R4: 6.581 Region-enriched R4: 4.921/0.00000 |
2.535 | 0.710 | 0.863 | - | - | - | 0.962 | Mlig455_060981 {REF} {Length: 3214} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=55.9]; YheC/D like ATP-grasp [PF14398.8, score=24.3]} {Smed: dd_Smed_v6_41668_0_1, dd_Smed_v6_41668_0_1, [Score=48.5, Expect=4e-06]} {RNA1509_29867, RNA1509_4675, RNA1509_6648} {RNA1310_7854.1, RNA1509_29867, RNA1509_4675, RNA1509_6648} {RNA1509_29867, RNA1509_4675, RNA1509_6648, RNA815_8173.1} | |
| 6. | MligTC455_32532 | 177 | 3.68 | Mlig455_056796 | Neo: - Age: - Region-enriched R4: 2.824/0.00001 |
2.467 | - | 0.958 | 0.729 | - | - | 0.780 | Mlig455_056796 {REF} {Length: 2578} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_8675} {RNA815_3094.1} | |
| 7. | MligTC455_30044 | 264 | 5.49 | Mlig455_003041, Mlig455_006184, Mlig455_011552, Mlig455_014494, Mlig455_051067 | Neo: Germline Age: - Region-specific R4: 5.436 |
RTL1 | 1.836 | - | 0.879 | - | - | - | 0.957 | Mlig455_003041 {REF} {Length: 2593} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=81.0]; Integrase zinc binding domain [PF17921.3, score=73.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.1]; Integrase core domain [PF00665.28, score=28.6]; H2C2 zinc finger [PF09337.12, score=27.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=115, Expect=1e-25]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=3e-22]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=3e-22]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=237, Expect=2e-66]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1} Mlig455_006184 {REF} {Length: 3323} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=81.5]; Integrase zinc binding domain [PF17921.3, score=72.3]; Integrase core domain [PF00665.28, score=28.5]; H2C2 zinc finger [PF09337.12, score=26.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [RH, Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=108, Expect=2e-23]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=108, Expect=2e-23]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=329, Expect=4e-97]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1} Mlig455_011552 {REF} {Length: 4931} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [Score=49.7, Expect=8e-07]} {RNA1509_14295} {RNA1310_1396.1, RNA1509_14295} {RNA1509_14295, RNA815_549.1} Mlig455_014494 {REF} {Length: 5296} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=50.4, Expect=4e-07]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1} Mlig455_051067 {REF} {Length: 4916} {Smed: dd_Smed_v6_7411_0_1, dd_Smed_v6_7411_0_1, [RH, Score=50.4, Expect=4e-07]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1} |
| 8. | MligTC455_10985 | 16 | 0.33 | Mlig455_066577 | Neo: - Age: - |
1.703 | - | 0.747 | - | - | - | 0.956 | Mlig455_066577 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_32406} {RNA815_44793} | |
| 9. | MligTC455_52340 | 34 | 0.71 | Mlig455_012358, Mlig455_012736 | Neo: - Age: Up-Down-Up |
SCNN1B | 1.685 | - | - | - | - | 0.731 | 0.954 | Mlig455_012358 {REF} {Length: 3412} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=180.9]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=58.9, Expect=2e-08]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=55.8, Expect=7e-08]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=404, Expect=3e-133]} {RNA1310_40062.1} {RNA815_16192} Mlig455_012736 {REF} {Length: 3026} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=180.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=58.9, Expect=2e-08]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=55.8, Expect=7e-08]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=405, Expect=2e-133]} {RNA1310_40062.1} {RNA815_16192} |
| 10. | MligTC455_38592 | 9 | 0.19 | Mlig455_068348 | Neo: - Age: - |
1.673 | - | - | - | - | 0.704 | 0.969 | Mlig455_068348 {REF} {Length: 979} {RNA1310_40042} {RNA815_34279} | |
| 11. | MligTC455_27014 | 237 | 4.94 | Mlig455_022608 | Neo: Int S/G2/M Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_022608 {REF} {Length: 3979} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.8]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=21.6]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=148, Expect=5e-41]} {RNA1509_24827, RNA1509_42493, RNA1509_44666, RNA1509_51004} {RNA1310_24000, RNA1509_24827, RNA1509_42493, RNA1509_44666, RNA1509_51004} {RNA1509_24827, RNA1509_42493, RNA1509_44666, RNA1509_51004, RNA815_6273} |