Data search
Results for MligTC455_38685
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38685 | 65 | 1.36 | Mlig455_023954 | Neo: Int S/G2/M Age: - Region-enriched R2: 4.633/0.03919 Regeneration-upregulated R4: 4.351 Regeneration-enriched R4: 4.351 |
EXO1 | Mlig455_023954 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=72.4]; XPG N-terminal domain [PF00752.19, score=67.6]; Tetratricopeptide repeat [PF13428.8, score=20.4]; XPG domain containing [PF12813.9, score=18.9]} {Human: ENSG00000174371, EXO1, exonuclease 1, [RH, Score=322, Expect=6e-99]} {Mouse: ENSMUSG00000039748, Exo1, exonuclease 1, [RH, Score=303, Expect=1e-91]} {Dmel: FBgn0015553, tos, tosca, [RH, Score=294, Expect=3e-89]} {Celegans: WBGene00009731, exo-1, EXOnuclease, [RH, Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_14547_0_2, dd_Smed_v6_14547_0_2, [RH, Score=312, Expect=7e-99]} {RNA1509_36924} {RNA1310_11462, RNA1509_36924} {RNA1509_36924, RNA815_7149} |
Cumulative graph for MligTC455_38685
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -9.531 | 1.682 | 0.01514 | 0.34659 | |
| RegionR2 | 4.633 | 1.682 | 0.00235 | 0.03919 | |
| RegionR3 | 2.523 | 1.682 | 0.02056 | 0.24095 | |
| RegionR4 | -1.926 | 1.682 | 0.99944 | 1.00000 | |
| RegionR5 | 1.778 | 1.682 | 0.09791 | 0.30078 | |
| RegionR6 | -0.011 | 1.682 | 0.88849 | 1.00000 | |
| RegionR7 | 0.937 | 1.682 | 0.58594 | 1.00000 | |
| RegionR8 | 1.599 | 1.682 | 0.46665 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.01 | 1.682 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.878 | 1.682 | 0.06858 | 0.42699 | |
| RegenerationR3 | 2.821 | 1.682 | 0.00791 | 0.16279 | |
| RegenerationR4 | 4.351 | 1.682 | 0.00009 | 0.00638 | Specific for R4: 4.351 |
| RegenerationR5 | 2.119 | 1.682 | 0.01241 | 0.19665 | |
| RegenerationR6 | 4.257 | 1.682 | 0.00343 | 0.06908 | |
| RegenerationBL | 3.968 | 1.682 | 0.01271 | 0.11574 | |
| RegenerationTP | 3.3 | 1.682 | 0.05290 | 0.37612 |
Genes with expression patterns similar to MligTC455_38685
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38685 | 65 | 1.36 | Mlig455_023954 | Neo: Int S/G2/M Age: - Region-enriched R2: 4.633/0.03919 Regeneration-upregulated R4: 4.351 Regeneration-enriched R4: 4.351 |
EXO1 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_023954 {REF} {Length: 2689} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=72.4]; XPG N-terminal domain [PF00752.19, score=67.6]; Tetratricopeptide repeat [PF13428.8, score=20.4]; XPG domain containing [PF12813.9, score=18.9]} {Human: ENSG00000174371, EXO1, exonuclease 1, [RH, Score=322, Expect=6e-99]} {Mouse: ENSMUSG00000039748, Exo1, exonuclease 1, [RH, Score=303, Expect=1e-91]} {Dmel: FBgn0015553, tos, tosca, [RH, Score=294, Expect=3e-89]} {Celegans: WBGene00009731, exo-1, EXOnuclease, [RH, Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_14547_0_2, dd_Smed_v6_14547_0_2, [RH, Score=312, Expect=7e-99]} {RNA1509_36924} {RNA1310_11462, RNA1509_36924} {RNA1509_36924, RNA815_7149} |
| 2. | MligTC455_11962 | 161 | 3.36 | Mlig455_007597, Mlig455_007598, Mlig455_020829, Mlig455_020936 | Neo: - Age: - |
FBXL20 | 0.982 | - | - | - | 0.982 | - | - | Mlig455_007597 {REF} {Length: 3041} {TRANSSPLICED} {RNA1509_29618} {RNA1310_41902} {RNA815_27627} Mlig455_007598 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.8]; F-box domain [PF00646.35, score=37.9]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=56.2, Expect=5e-08]; ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=62.4, Expect=7e-11]} {Dmel: FBgn0033639, CG9003, [Score=48.9, Expect=6e-06]} {RNA1509_13719} {RNA1310_41902} {RNA815_27627} Mlig455_020829 {REF} {Length: 1938} {RNA1509_24145} {RNA1310_41902} {RNA815_27627} Mlig455_020936 {REF} {Length: 2152} {TRANSSPLICED} {RNA1509_24145} {RNA1310_41902} {RNA815_27627} |
| 3. | MligTC455_11717 | 89 | 1.85 | Mlig455_061662, Mlig455_061663 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_061662 {REF} {Length: 1100} {RNA1509_13494} {RNA1310_72946} {RNA815_44318} Mlig455_061663 {REF} {Length: 1440} {RNA1310_86013} {RNA815_53527} |
|
| 4. | MligTC455_14406 | 103 | 2.15 | Mlig455_002589 | Neo: Irradiation Age: Up-Down-Down |
0.953 | - | - | - | - | 0.953 | - | Mlig455_002589 {REF} {Length: 1277} {NoTransDecoderORF} {RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1310_40837, RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1509_10088, RNA1509_30779, RNA1509_49666, RNA815_26697} |