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Results for MligTC455_38686

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38686 107 2.22 Mlig455_069859

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.820/0.02054

 EXO1 Mlig455_069859 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: XPG N-terminal domain [PF00752.19, score=68.0]; XPG I-region [PF00867.20, score=30.4]; Tetratricopeptide repeat [PF13428.8, score=21.0]} {Human: ENSG00000174371, EXO1, exonuclease 1, [Score=260, Expect=2e-77]} {Mouse: ENSMUSG00000039748, Exo1, exonuclease 1, [Score=245, Expect=1e-71]} {Dmel: FBgn0015553, tos, tosca, [Score=247, Expect=3e-73]} {Celegans: WBGene00009731, exo-1, EXOnuclease, [Score=152, Expect=1e-39]} {Smed: dd_Smed_v6_14547_0_5, dd_Smed_v6_14547_0_5, [Score=252, Expect=7e-79]} {RNA1509_36924} {RNA1310_11462} {RNA815_8221}

Cumulative graph for MligTC455_38686

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.73 2.153 0.02248 0.40657
RegionR2 3.789 2.153 0.00632 0.07492
RegionR3 2.59 2.153 0.02300 0.25773
RegionR4 -0.346 2.153 0.94056 1.00000
RegionR5 2.82 2.153 0.00248 0.02054
RegionR6 1.271 2.153 0.34094 0.92806
RegionR7 0.174 2.153 0.83120 1.00000
RegionR8 -0.567 2.153 0.97224 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.704 2.153 0.99976 1.00000
RegenerationR2 0.782 2.153 0.31859 0.75679
RegenerationR3 1.148 2.153 0.17668 0.61232
RegenerationR4 2.427 2.153 0.00588 0.10994
RegenerationR5 0.629 2.153 0.34464 0.76054
RegenerationR6 1.771 2.153 0.07909 0.35085
RegenerationBL 2.886 2.153 0.01778 0.14280
RegenerationTP -2.04 2.153 0.39717 0.82716


Genes with expression patterns similar to MligTC455_38686

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38686 107 2.22 Mlig455_069859

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.820/0.02054

 EXO1 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_069859 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: XPG N-terminal domain [PF00752.19, score=68.0]; XPG I-region [PF00867.20, score=30.4]; Tetratricopeptide repeat [PF13428.8, score=21.0]} {Human: ENSG00000174371, EXO1, exonuclease 1, [Score=260, Expect=2e-77]} {Mouse: ENSMUSG00000039748, Exo1, exonuclease 1, [Score=245, Expect=1e-71]} {Dmel: FBgn0015553, tos, tosca, [Score=247, Expect=3e-73]} {Celegans: WBGene00009731, exo-1, EXOnuclease, [Score=152, Expect=1e-39]} {Smed: dd_Smed_v6_14547_0_5, dd_Smed_v6_14547_0_5, [Score=252, Expect=7e-79]} {RNA1509_36924} {RNA1310_11462} {RNA815_8221}
2. MligTC455_41639 740 15.41 Mlig455_049067

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.676/0.00031

 1.671 0.963 - - - - 0.708 Mlig455_049067 {REF} {Length: 1380} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=29.4]; Ankyrin repeat [PF00023.32, score=20.3]; Ankyrin repeats (3 copies) [PF12796.9, score=20.2]} {RNA1509_12522} {RNA1310_20494} {RNA815_11245}
3. MligTC455_52830 508 10.58 Mlig455_066888

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.089/0.00951

 0.973 - - - 0.973 - - Mlig455_066888 {REF} {Length: 6019} {TRANSSPLICED} {Pfam: AIMP2 lysyl-tRNA synthetase binding domain [PF16780.7, score=25.7]} {RNA1509_26768} {RNA1310_27753} {RNA815_13233.1}
4. MligTC455_52337 291 6.07 Mlig455_008793

Neo: -

Age: -

 C2orf76 0.956 - - - 0.956 - - Mlig455_008793 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2340) [PF10209.11, score=127.1]} {Human: ENSG00000186132, C2orf76, chromosome 2 open reading frame 76, [RH, Score=97.1, Expect=3e-26]} {Mouse: ENSMUSG00000026388, 3110009E18Rik, RIKEN cDNA 3110009E18 gene, [RH, Score=92.0, Expect=2e-24]} {RNA1509_25259} {RNA1310_9901.1} {RNA815_28452}
5. MligTC455_05341 796 16.58 Mlig455_000815, Mlig455_005019, Mlig455_020626, Mlig455_034282, Mlig455_037907, Mlig455_038998, Mlig455_051914, Mlig455_057622, Mlig455_060100, Mlig455_060135, Mlig455_068806

Neo: Germline

Age: -

Region-enriched R4: 5.772/0.00000

 PIF1 0.95 - - - - 0.950 -

Mlig455_000815 {REF} {Length: 1455} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=43.1]; Replication protein A OB domain [PF16900.7, score=28.7]; OB-fold nucleic acid binding domain [PF13742.8, score=21.7]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=70.9, Expect=2e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_005019 {REF} {Length: 1322} {Pfam: Replication protein A OB domain [PF16900.7, score=39.3]; OB-fold nucleic acid binding domain [PF01336.27, score=20.0]} {RNA1509_56963} {RNA1310_17717} {RNA815_6362}

Mlig455_020626 {REF} {Length: 2248} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_034282 {REF} {Length: 1746} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=47.9]; Replication protein A OB domain [PF16900.7, score=42.8]; OB-fold nucleic acid binding domain [PF13742.8, score=22.7]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=72.0, Expect=1e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_037907 {REF} {Length: 1678} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=41.6]; Replication protein A OB domain [PF16900.7, score=37.0]; OB-fold nucleic acid binding domain [PF13742.8, score=19.0]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=69.3, Expect=9e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_038998 {REF} {Length: 4402} {Pfam: PIF1-like helicase [PF05970.16, score=340.8]; AAA domain [PF13604.8, score=49.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=28.0]; AAA domain [PF13245.8, score=19.7]; Helicase [PF02689.16, score=17.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=118, Expect=3e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=108, Expect=3e-24]} {Celegans: WBGene00019136, F59H6.5, [Score=337, Expect=6e-100]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=115, Expect=1e-26]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_051914 {REF} {Length: 1511} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=47.9]; Replication protein A OB domain [PF16900.7, score=42.8]; OB-fold nucleic acid binding domain [PF13742.8, score=22.7]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=72.0, Expect=1e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_057622 {REF} {Length: 1525} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=48.8]; Replication protein A OB domain [PF16900.7, score=43.7]; OB-fold nucleic acid binding domain [PF13742.8, score=23.5]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=72.8, Expect=7e-14]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_060100 {REF} {Length: 1730} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=47.9]; Replication protein A OB domain [PF16900.7, score=42.8]; OB-fold nucleic acid binding domain [PF13742.8, score=22.7]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=72.0, Expect=1e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_060135 {REF} {Length: 1618} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=47.9]; Replication protein A OB domain [PF16900.7, score=42.8]; OB-fold nucleic acid binding domain [PF13742.8, score=22.7]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=72.0, Expect=1e-13]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

Mlig455_068806 {REF} {Length: 2963} {Smed: dd_Smed_v6_5211_0_1, dd_Smed_v6_5211_0_1, [Score=45.8, Expect=1e-05]} {RNA1509_56963} {RNA1310_12499} {RNA815_6362}

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