Data search


search
Exact
Search

Results for MligTC455_38718

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38718 10 0.21 Mlig455_070480

Neo: -

Age: -

Mlig455_070480 {REF} {Length: 3273} {NoTransDecoderORF} {RNA1509_9213} {RNA1310_44393} {RNA815_14343.2}

Cumulative graph for MligTC455_38718

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.675 0.745 1.00000 1.00000
RegionR2 -1.01 0.745 0.99989 1.00000
RegionR3 -0.102 0.745 0.99995 1.00000
RegionR4 0.556 0.745 0.99991 1.00000
RegionR5 0.07 0.745 0.99997 1.00000
RegionR6 -0.509 0.745 0.99996 1.00000
RegionR7 -0.215 0.745 1.00000 1.00000
RegionR8 0.535 0.745 0.99995 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.457 0.745 1.00000 1.00000
RegenerationR2 3.002 0.745 0.10682 0.51324
RegenerationR3 0.808 0.745 0.57951 0.89864
RegenerationR4 1.545 0.745 0.37126 0.79473
RegenerationR5 2.388 0.745 0.22580 0.65985
RegenerationR6 2.829 0.745 0.29871 0.64904
RegenerationBL 0.45 0.745 0.70316 1.00000
RegenerationTP -0.523 0.745 0.91081 1.00000


Genes with expression patterns similar to MligTC455_38718

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38718 10 0.21 Mlig455_070480

Neo: -

Age: -

2 - - - 1.000 1.000 - Mlig455_070480 {REF} {Length: 3273} {NoTransDecoderORF} {RNA1509_9213} {RNA1310_44393} {RNA815_14343.2}
2. MligTC455_56229 105 2.2 Mlig455_001102

Neo: -

Age: -

0.977 - - - 0.977 - - Mlig455_001102 {REF} {Length: 742} {RNA1509_54498} {RNA1310_15427} {RNA815_19080.1}
3. MligTC455_10730 6 0.12 Mlig455_052404

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_052404 {REF} {Length: 688} {NoTransDecoderORF} {RNA1509_44742} {RNA1310_36023} {RNA815_17244}
4. MligTC455_07439 17 0.36 Mlig455_056539

Neo: -

Age: -

THAP12 0.974 - - - 0.974 - - Mlig455_056539 {REF} {Length: 2824} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=97.0]; Protein of unknown function (DUF 659) [PF04937.17, score=19.0]} {Human: ENSG00000137492, THAP12, THAP domain containing 12, [Score=135, Expect=3e-33]} {Mouse: ENSMUSG00000030753, Thap12, THAP domain containing 12, [Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_27814_0_2, dd_Smed_v6_27814_0_2, [Score=113, Expect=2e-28]} {RNA1310_98157} {RNA815_50753}
5. MligTC455_01297 70 1.46 Mlig455_042285

Neo: -

Age: -

0.973 - - - - 0.973 - Mlig455_042285 {REF} {Length: 118} {NoTransDecoderORF}
6. MligTC455_08599 133 2.76 Mlig455_004269, Mlig455_004339

Neo: -

Age: -

0.971 - - - 0.971 - -

Mlig455_004269 {REF} {Length: 1241} {NoTransDecoderORF}

Mlig455_004339 {REF} {Length: 1394} {NoTransDecoderORF}
7. MligTC455_12841 12 0.25 Mlig455_068006

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.384

0.963 - - - - 0.963 - Mlig455_068006 {REF} {Length: 1150} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=55.2]; Immunoglobulin domain [PF13927.8, score=36.7]; Immunoglobulin V-set domain [PF07686.19, score=28.0]; Immunoglobulin domain [PF13895.8, score=23.4]; Immunoglobulin domain [PF00047.27, score=20.3]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0086906, sls, sallimus, [Score=54.3, Expect=1e-07]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=48.5, Expect=7e-06]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=82.8, Expect=6e-17]} {RNA1509_30594} {RNA1310_45, RNA1509_30594} {RNA1509_30594, RNA815_17}
8. MligTC455_38525 29 0.61 Mlig455_030459

Neo: -

Age: -

0.96 - - - 0.960 - - Mlig455_030459 {REF} {Length: 4435} {NoTransDecoderORF} {RNA1509_40664} {RNA1310_77923} {RNA815_56337}
9. MligTC455_15074 248 5.16 Mlig455_026600, Mlig455_042806

Neo: -

Age: -

Region-enriched R6: 5.209/0.00003

B3GNT6 0.958 - - - 0.958 - -

Mlig455_026600 {REF} {Length: 1811} {Pfam: Galactosyltransferase [PF01762.23, score=127.7]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=110, Expect=4e-26]; ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=109, Expect=3e-26]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=108, Expect=2e-25]} {Dmel: FBgn0035558, CG11357, [Score=145, Expect=6e-39]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=68.6, Expect=1e-12]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=261, Expect=5e-84]} {RNA1509_8878} {RNA1310_19821, RNA1509_8878} {RNA1509_8878, RNA815_7886.1}

Mlig455_042806 {REF} {Length: 1822} {Pfam: Galactosyltransferase [PF01762.23, score=127.6]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=110, Expect=4e-26]; ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [Score=109, Expect=2e-26]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=108, Expect=2e-25]} {Dmel: FBgn0035558, CG11357, [Score=145, Expect=6e-39]} {Celegans: WBGene00007104, B0024.15, Hexosyltransferase, [Score=68.9, Expect=1e-12]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [RH, Score=261, Expect=4e-84]} {RNA1509_8878} {RNA1310_19821} {RNA815_7886.1}
10. MligTC455_26112 54 1.13 Mlig455_036946

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_036946 {REF} {Length: 3272} {RNA1509_41127} {RNA1310_25191} {RNA815_5881.1}
11. MligTC455_30640 21 0.43 Mlig455_033340, Mlig455_059920, Mlig455_059921

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.471

0.953 - - - - 0.953 -

Mlig455_033340 {REF} {Length: 1064} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=115.7]} {RNA1310_20156} {RNA815_48681}

Mlig455_059920 {REF} {Length: 6501} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=108.0]} {RNA1509_55441} {RNA1310_13439} {RNA815_28604}

Mlig455_059921 {REF} {Length: 1555} {NoTransDecoderORF} {RNA1509_55441} {RNA1310_69678.1} {RNA815_49809}
12. MligTC455_18134 8 0.16 Mlig455_024862

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.685

CRAMP1 0.952 - - - 0.952 - - Mlig455_024862 {REF} {Length: 3848} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=20.8]} {Human: ENSG00000007545, CRAMP1, cramped chromatin regulator homolog 1, [RH, Score=134, Expect=1e-31]} {Mouse: ENSMUSG00000038002, Cramp1l, cramped chromatin regulator homolog 1, [RH, Score=135, Expect=7e-32]} {Dmel: FBgn0000376, crm, cramped, [RH, Score=144, Expect=3e-35]} {Smed: dd_Smed_v6_6124_0_1, dd_Smed_v6_6124_0_1, [RH, Score=273, Expect=4e-80]} {RNA1509_20088} {RNA1310_14330} {RNA815_29842}
13. MligTC455_35870 19 0.4 Mlig455_065478

Neo: -

Age: -

0.952 - - - 0.952 - - Mlig455_065478 {REF} {Length: 942} {RNA1310_89037}
14. MligTC455_12414 11 0.23 Mlig455_064093

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.536

0.951 - - - - 0.951 - Mlig455_064093 {REF} {Length: 1098} {Pfam: Glutamine amidotransferases class-II [PF00310.23, score=559.9]; Conserved region in glutamate synthase [PF01645.19, score=504.4]; Glutamate synthase central domain [PF04898.16, score=353.1]; GXGXG motif [PF01493.21, score=249.0]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.8, score=26.1]} {Dmel: FBgn0036663, CG9674, [RH, Score=1775, Expect=0.0]} {Celegans: WBGene00012326, W07E11.1, [RH, Score=1861, Expect=0.0]} {Smed: dd_Smed_v6_5074_0_1, dd_Smed_v6_5074_0_1, [RH, Score=1964, Expect=0.0]} {RNA1509_36288} {RNA1310_1019.1} {RNA815_141.1}
15. MligTC455_34443 98 2.04 Mlig455_039435, Mlig455_039479

Neo: -

Age: -

Regeneration-upregulated TP: 7.654

Regeneration-enriched TP: 7.654

ANK2 0.951 - - - 0.951 - -

Mlig455_039435 {REF} {Length: 2508} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.1]; Ankyrin repeat [PF00023.32, score=106.1]; Ankyrin repeats (many copies) [PF13637.8, score=97.5]; Ankyrin repeats (many copies) [PF13857.8, score=90.5]; Ankyrin repeat [PF13606.8, score=81.2]; Secretion system effector C (SseC) like family [PF04888.14, score=23.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=97.4, Expect=2e-20]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=97.4, Expect=1e-20]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=89.4, Expect=3e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=94.4, Expect=7e-20]} {Smed: dd_Smed_v6_2072_0_32, dd_Smed_v6_2072_0_32, [Score=81.6, Expect=6e-16]} {RNA1509_46740} {RNA1310_6951.1} {RNA815_11882}

Mlig455_039479 {REF} {Length: 2282} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=116.8]; Ankyrin repeat [PF00023.32, score=102.3]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]; Ankyrin repeats (many copies) [PF13857.8, score=89.3]; Ankyrin repeat [PF13606.8, score=80.5]; Secretion system effector C (SseC) like family [PF04888.14, score=23.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=86.3, Expect=5e-17]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=82.0, Expect=1e-15]; ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=80.9, Expect=2e-15]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=80.9, Expect=1e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=89.7, Expect=2e-18]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=80.9, Expect=9e-16]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=84.7, Expect=4e-17]} {RNA1509_46740} {RNA1310_6951.1} {RNA815_11882}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA