Data search
Results for MligTC455_38719
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38719 | 468 | 9.75 | Mlig455_059387 | Neo: - Age: Up-Down-Down |
COL4A6 | Mlig455_059387 {REF} {Length: 5938} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=619.6]; C-terminal tandem repeated domain in type 4 procollagen [PF01413.21, score=202.1]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [RH, Score=508, Expect=4e-151]} {Mouse: ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=516, Expect=1e-153]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=516, Expect=1e-153]} {Dmel: FBgn0016075, vkg, viking, [Score=599, Expect=0.0]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=572, Expect=2e-173]} {Smed: dd_Smed_v6_2337_0_1, dd_Smed_v6_2337_0_1, [Score=732, Expect=0.0]} {RNA1509_5346, RNA1509_59228} {RNA1310_692.1, RNA1509_5346, RNA1509_59228} {RNA1509_5346, RNA1509_59228, RNA815_573} |
Cumulative graph for MligTC455_38719
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.451 | 3.652 | 0.81887 | 1.00000 | |
| RegionR2 | -0.532 | 3.652 | 0.48988 | 0.87208 | |
| RegionR3 | -0.126 | 3.652 | 0.85619 | 1.00000 | |
| RegionR4 | 0.019 | 3.652 | 0.98185 | 1.00000 | |
| RegionR5 | -1.224 | 3.652 | 0.09047 | 0.28495 | |
| RegionR6 | 0.333 | 3.652 | 0.59014 | 1.00000 | |
| RegionR7 | 0.57 | 3.652 | 0.45687 | 1.00000 | |
| RegionR8 | 1.411 | 3.652 | 0.09778 | 0.58932 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.6 | 3.652 | 0.79620 | 1.00000 | |
| RegenerationR2 | 0.519 | 3.652 | 0.44574 | 0.84355 | |
| RegenerationR3 | 0.392 | 3.652 | 0.61205 | 0.91363 | |
| RegenerationR4 | 0.529 | 3.652 | 0.48971 | 0.86438 | |
| RegenerationR5 | 1.418 | 3.652 | 0.06110 | 0.39285 | |
| RegenerationR6 | 0.635 | 3.652 | 0.37465 | 0.71687 | |
| RegenerationBL | 0.142 | 3.652 | 0.84924 | 1.00000 | |
| RegenerationTP | -0.669 | 3.652 | 0.39541 | 0.82594 |
Genes with expression patterns similar to MligTC455_38719
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38719 | 468 | 9.75 | Mlig455_059387 | Neo: - Age: Up-Down-Down |
COL4A6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059387 {REF} {Length: 5938} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=619.6]; C-terminal tandem repeated domain in type 4 procollagen [PF01413.21, score=202.1]} {Human: ENSG00000197565, COL4A6, collagen type IV alpha 6 chain, [RH, Score=508, Expect=4e-151]} {Mouse: ENSMUSG00000116510, Col4a6, collagen, type IV, alpha 6, [Score=516, Expect=1e-153]; ENSMUSG00000031273, Col4a6, collagen, type IV, alpha 6, [Score=516, Expect=1e-153]} {Dmel: FBgn0016075, vkg, viking, [Score=599, Expect=0.0]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=572, Expect=2e-173]} {Smed: dd_Smed_v6_2337_0_1, dd_Smed_v6_2337_0_1, [Score=732, Expect=0.0]} {RNA1509_5346, RNA1509_59228} {RNA1310_692.1, RNA1509_5346, RNA1509_59228} {RNA1509_5346, RNA1509_59228, RNA815_573} |
| 2. | MligTC455_21847 | 88 | 1.83 | Mlig455_002908, Mlig455_032608 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_002908 {REF} {Length: 4389} {NoTransDecoderORF} {RNA1509_40232} {RNA1310_33581} {RNA815_1090.1} Mlig455_032608 {REF} {Length: 3828} {NoTransDecoderORF} {RNA1509_35989} {RNA1310_3490.1, RNA1509_35989} {RNA1509_35989, RNA815_52019} |
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