Data search


search
Exact
Search

Results for MligTC455_38779

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38779 16243 338.39 Mlig455_069470

Neo: -

Age: -

Regeneration-downregulated BL: -1.465

Regeneration-depleted BL: -1.465

Mlig455_069470 {REF} {Length: 909} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=26.1]} {RNA1509_1110} {RNA1310_34072.1} {RNA815_14544}

Cumulative graph for MligTC455_38779

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.843 8.496 0.05186 0.53536
RegionR2 -0.795 8.496 0.02036 0.15492
RegionR3 0.479 8.496 0.08852 0.52562
RegionR4 0.184 8.496 0.56478 0.88410
RegionR5 0.003 8.496 0.99246 1.00000
RegionR6 0.532 8.496 0.05578 0.44313
RegionR7 0.115 8.496 0.68586 1.00000
RegionR8 0.326 8.496 0.28210 0.90876

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.434 8.496 0.41910 1.00000
RegenerationR2 -0.002 8.496 0.99567 1.00000
RegenerationR3 -0.264 8.496 0.47256 0.84573
RegenerationR4 -0.126 8.496 0.73957 0.96742
RegenerationR5 -0.416 8.496 0.25727 0.68935
RegenerationR6 -0.318 8.496 0.39034 0.73010
RegenerationBL -1.465 8.496 0.00003 0.00163 Specific for BL: -1.465
RegenerationTP -0.201 8.496 0.56047 0.93913


Genes with expression patterns similar to MligTC455_38779

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38779 16243 338.39 Mlig455_069470

Neo: -

Age: -

Regeneration-downregulated BL: -1.465

Regeneration-depleted BL: -1.465

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069470 {REF} {Length: 909} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=26.1]} {RNA1509_1110} {RNA1310_34072.1} {RNA815_14544}
2. MligTC455_38778 36936 769.5 Mlig455_054817, Mlig455_054825

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.175

Regeneration-downregulated BL: -1.540

Regeneration-depleted BL: -1.540

5.953 0.992 0.997 0.992 0.995 0.987 0.990

Mlig455_054817 {REF} {Length: 990} {TRANSSPLICED} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=34.3]} {Smed: dd_Smed_v6_5756_0_1, dd_Smed_v6_5756_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_1053} {RNA1310_34072.1} {RNA815_14544}

Mlig455_054825 {REF} {Length: 1268} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=34.8]} {Smed: dd_Smed_v6_5756_0_1, dd_Smed_v6_5756_0_1, [RH, Score=48.1, Expect=1e-07]} {RNA1509_1053, RNA1509_1110, RNA1509_1758} {RNA1310_34072.1, RNA1509_1053, RNA1509_1110, RNA1509_1758} {RNA1509_1053, RNA1509_1110, RNA1509_1758, RNA815_14544}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA