Data search
Results for MligTC455_38823
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38823 | 73 | 1.53 | Mlig455_070584 | Neo: - Age: Up-Down-Down |
RGS7 | Mlig455_070584 {REF} {Length: 4892} {TRANSSPLICED} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=105.4]; Regulator of G protein signaling domain [PF00615.21, score=97.8]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=54.6]; GGL domain [PF00631.24, score=31.5]} {Human: ENSG00000182901, RGS7, regulator of G protein signaling 7, [RH, Score=385, Expect=3e-127]; ENSG00000182732, RGS6, regulator of G protein signaling 6, [RH, Score=382, Expect=4e-126]} {Mouse: ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [RH, Score=387, Expect=5e-128]; ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [RH, Score=383, Expect=8e-127]} {Dmel: FBgn0024941, RSG7, Regulator of G-protein signaling 7, [Score=432, Expect=2e-143]} {Celegans: WBGene00001179, egl-10, Regulator of G-protein signaling egl-10, [RH, Score=254, Expect=1e-75]} {Smed: dd_Smed_v6_4578_0_1, dd_Smed_v6_4578_0_1, [RH, Score=291, Expect=8e-90]} {RNA1509_21334, RNA1509_56452} {RNA1310_4969.1, RNA1509_56452} {RNA1509_56452, RNA815_12142} |
Cumulative graph for MligTC455_38823
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.976 | 1.798 | 0.99982 | 1.00000 | |
| RegionR2 | 2.591 | 1.798 | 0.06351 | 0.30459 | |
| RegionR3 | 0.157 | 1.798 | 0.69916 | 1.00000 | |
| RegionR4 | 0.002 | 1.798 | 0.74075 | 1.00000 | |
| RegionR5 | 2.49 | 1.798 | 0.00873 | 0.05230 | |
| RegionR6 | 2.025 | 1.798 | 0.07752 | 0.51655 | |
| RegionR7 | -3.757 | 1.798 | 0.99980 | 1.00000 | |
| RegionR8 | 1.467 | 1.798 | 0.37295 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.248 | 1.798 | 0.99994 | 1.00000 | |
| RegenerationR2 | 0.014 | 1.798 | 0.98323 | 1.00000 | |
| RegenerationR3 | 1.467 | 1.798 | 0.17712 | 0.61232 | |
| RegenerationR4 | 0.192 | 1.798 | 0.86783 | 1.00000 | |
| RegenerationR5 | -0.718 | 1.798 | 0.39256 | 0.79404 | |
| RegenerationR6 | -0.232 | 1.798 | 0.82143 | 0.98745 | |
| RegenerationBL | -0.293 | 1.798 | 0.83596 | 1.00000 | |
| RegenerationTP | -1.896 | 1.798 | 0.99957 | 1.00000 |
Genes with expression patterns similar to MligTC455_38823
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38823 | 73 | 1.53 | Mlig455_070584 | Neo: - Age: Up-Down-Down |
RGS7 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_070584 {REF} {Length: 4892} {TRANSSPLICED} {Pfam: Regulator of G-protein signalling DHEX domain [PF18148.3, score=105.4]; Regulator of G protein signaling domain [PF00615.21, score=97.8]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=54.6]; GGL domain [PF00631.24, score=31.5]} {Human: ENSG00000182901, RGS7, regulator of G protein signaling 7, [RH, Score=385, Expect=3e-127]; ENSG00000182732, RGS6, regulator of G protein signaling 6, [RH, Score=382, Expect=4e-126]} {Mouse: ENSMUSG00000021219, Rgs6, regulator of G-protein signaling 6, [RH, Score=387, Expect=5e-128]; ENSMUSG00000026527, Rgs7, regulator of G protein signaling 7, [RH, Score=383, Expect=8e-127]} {Dmel: FBgn0024941, RSG7, Regulator of G-protein signaling 7, [Score=432, Expect=2e-143]} {Celegans: WBGene00001179, egl-10, Regulator of G-protein signaling egl-10, [RH, Score=254, Expect=1e-75]} {Smed: dd_Smed_v6_4578_0_1, dd_Smed_v6_4578_0_1, [RH, Score=291, Expect=8e-90]} {RNA1509_21334, RNA1509_56452} {RNA1310_4969.1, RNA1509_56452} {RNA1509_56452, RNA815_12142} |
| 2. | MligTC455_07195 | 667 | 13.91 | Mlig455_041679 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.210 Region-enriched R5: 1.098/0.04443 |
DPP3 | 1.697 | - | 0.735 | - | - | 0.962 | - | Mlig455_041679 {REF} {Length: 2466} {TRANSSPLICED} {Pfam: Peptidase family M49 [PF03571.17, score=699.8]} {Human: ENSG00000254986, DPP3, dipeptidyl peptidase 3, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000063904, Dpp3, dipeptidylpeptidase 3, [RH, Score=724, Expect=0.0]} {Dmel: FBgn0037580, DppIII, Dipeptidyl aminopeptidase III, [RH, Score=636, Expect=0.0]} {Celegans: WBGene00008532, dpt-1, Dipeptidyl peptidase 3, [RH, Score=648, Expect=0.0]} {Smed: dd_Smed_v6_1031_0_1, dd_Smed_v6_1031_0_1, [RH, Score=716, Expect=0.0]} {RNA1509_11071} {RNA1310_6873.1, RNA1509_11071} {RNA1509_11071, RNA815_2207.1} |
| 3. | MligTC455_17571 | 66 | 1.38 | Mlig455_055064, Mlig455_064061 | Neo: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_055064 {REF} {Length: 762} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31425} {RNA1310_38834} {RNA815_18319} Mlig455_064061 {REF} {Length: 903} {TRANSSPLICED} {RNA1509_31425} {RNA1310_38834} {RNA815_18319} |
|
| 4. | MligTC455_52853 | 188 | 3.91 | Mlig455_047307 | Neo: - Age: Down-Up-Down |
0.969 | - | - | - | - | 0.969 | - | Mlig455_047307 {REF} {Length: 965} {RNA1509_33946} {RNA1310_76051} {RNA815_43371} | |
| 5. | MligTC455_19525 | 148 | 3.08 | Mlig455_065980 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_065980 {REF} {Length: 561} {NoTransDecoderORF} {RNA1509_59498} {RNA1310_83003.1} {RNA815_33746.1} | |
| 6. | MligTC455_51313 | 10 | 0.21 | Mlig455_042838, Mlig455_045872 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_042838 {REF} {Length: 1317} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.4]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=30.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.6]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=104, Expect=4e-25]} Mlig455_045872 {REF} {Length: 1317} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.4]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=30.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.6]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=104, Expect=4e-25]} |
|
| 7. | MligTC455_07034 | 188 | 3.92 | Mlig455_062971 | Neo: - Age: - |
DCUN1D3 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_062971 {REF} {Length: 1612} {TRANSSPLICED} {Pfam: Cullin binding [PF03556.17, score=102.5]} {Human: ENSG00000188215, DCUN1D3, defective in cullin neddylation 1 domain containing 3, [Score=155, Expect=5e-45]} {Mouse: ENSMUSG00000048787, Dcun1d3, DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae), [Score=155, Expect=3e-45]} {Dmel: FBgn0033784, SCCRO3, Squamous cell carcinoma-related oncogene 3, [RH, Score=153, Expect=2e-44]} {Celegans: WBGene00010428, dcn-1, Defective in cullin neddylation protein 1, [Score=90.9, Expect=1e-21]} {Smed: dd_Smed_v6_3227_0_1, dd_Smed_v6_3227_0_1, [Score=92.8, Expect=3e-22]} {RNA1509_47536} {RNA1310_18793.1} {RNA815_23221} |
| 8. | MligTC455_17740 | 45 | 0.95 | Mlig455_005274 | Neo: - Age: - |
PKNOX1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_005274 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: Homeobox KN domain [PF05920.13, score=68.0]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=67.2]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000160199, PKNOX1, PBX/knotted 1 homeobox 1, [RH, Score=207, Expect=2e-59]} {Mouse: ENSMUSG00000006705, Pknox1, Pbx/knotted 1 homeobox, [RH, Score=214, Expect=7e-62]} {Dmel: FBgn0001235, hth, homothorax, [Score=119, Expect=3e-28]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=277, Expect=7e-83]} {RNA1509_9638} {RNA1310_1426.1} {RNA815_7214} |
| 9. | MligTC455_42873 | 90 | 1.88 | Mlig455_012965 | Neo: - Age: Down-Up-Up |
0.959 | - | - | - | - | - | 0.959 | Mlig455_012965 {REF} {Length: 1943} {Pfam: PAN domain [PF00024.28, score=22.0]} {RNA1310_27048} {RNA815_38245} | |
| 10. | MligTC455_44662 | 76 | 1.57 | Mlig455_038241 | Neo: - Age: logFC(26M/2M)=-0.868 |
ANO7 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_038241 {REF} {Length: 3705} {Pfam: Calcium-activated chloride channel [PF04547.14, score=457.8]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=572, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=561, Expect=0.0]} {Dmel: FBgn0038721, subdued, [Score=420, Expect=3e-137]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=165, Expect=1e-43]} {Smed: dd_Smed_v6_19189_0_1, dd_Smed_v6_19189_0_1, [Score=659, Expect=0.0]} {RNA1509_46639} {RNA1310_1412.2} {RNA815_15650} |
| 11. | MligTC455_26463 | 46 | 0.95 | Mlig455_009434 | Neo: - Age: Down-Down-Up |
CLCA1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_009434 {REF} {Length: 3958} {Pfam: von Willebrand factor type A domain [PF13519.8, score=57.9]; von Willebrand factor type A domain [PF00092.30, score=42.8]; von Willebrand factor type A domain [PF13768.8, score=41.5]; Calcium-activated chloride channel N terminal [PF08434.13, score=31.1]; VWA domain containing CoxE-like protein [PF05762.16, score=22.1]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=149, Expect=3e-36]; ENSG00000016602, CLCA4, chloride channel accessory 4, [Score=147, Expect=1e-35]} {Mouse: ENSMUSG00000068547, Clca4a, chloride channel accessory 4A, [Score=150, Expect=1e-36]; ENSMUSG00000074195, Clca4b, chloride channel accessory 4B, [Score=148, Expect=7e-36]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=110, Expect=1e-24]} {RNA1509_49943} {RNA1310_21040.1} {RNA815_1871} |
| 12. | MligTC455_35373 | 50 | 1.03 | Mlig455_065912, Mlig455_070019 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 7.651 Regeneration-enriched BL: 7.651 |
GLRA2 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_065912 {REF} {Length: 3290} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=121.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=327, Expect=1e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=321, Expect=2e-104]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=319, Expect=1e-103]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=325, Expect=4e-106]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=323, Expect=3e-105]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=3e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=2e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=5e-93]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=283, Expect=3e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} Mlig455_070019 {REF} {Length: 4890} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=326, Expect=2e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=323, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=318, Expect=2e-103]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=325, Expect=5e-106]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=324, Expect=7e-106]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=6e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=1e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=7e-92]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=284, Expect=2e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} |
| 13. | MligTC455_23374 | 134 | 2.78 | Mlig455_016409 | Neo: - Age: - |
CDC34 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_016409 {REF} {Length: 5157} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=154.3]} {Human: ENSG00000099804, CDC34, cell division cycle 34, [RH, Score=280, Expect=2e-95]; ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=277, Expect=4e-94]} {Mouse: ENSMUSG00000020307, Cdc34, cell division cycle 34, [RH, Score=279, Expect=6e-95]; ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=277, Expect=3e-94]; ENSMUSG00000020870, Cdc34b, cell division cycle 34B, [RH, Score=273, Expect=1e-92]} {Dmel: FBgn0036516, CG7656, [RH, Score=281, Expect=1e-94]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [RH, Score=264, Expect=3e-89]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [RH, Score=259, Expect=3e-87]} {RNA1509_31608} {RNA1310_20391} {RNA815_14254} |
| 14. | MligTC455_35418 | 100 | 2.08 | Mlig455_044838 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.788 Region-enriched R2: 3.807/0.02986 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_044838 {REF} {Length: 1117} {Smed: dd_Smed_v6_15147_0_1, dd_Smed_v6_15147_0_1, [RH, Score=135, Expect=6e-35]} {RNA1310_45316.1} {RNA815_39596} | |
| 15. | MligTC455_12847 | 25 | 0.51 | Mlig455_049599 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_049599 {REF} {Length: 1963} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=67.4]; Olfactory receptor [PF13853.8, score=24.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.1]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [RH, Score=91.7, Expect=1e-19]} {Smed: dd_Smed_v6_35525_0_1, dd_Smed_v6_35525_0_1, [Score=144, Expect=1e-38]} {RNA1310_85894} {RNA815_45174} | |
| 16. | MligTC455_40687 | 28 | 0.58 | Mlig455_040563, Mlig455_062078 | Neo: - Age: - |
PDE1C | 0.95 | - | - | - | 0.950 | - | - | Mlig455_040563 {REF} {Length: 1798} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.1]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.0]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=362, Expect=2e-117]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=358, Expect=2e-117]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=362, Expect=5e-118]; ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=362, Expect=7e-120]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=346, Expect=4e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_21546_0_1, dd_Smed_v6_21546_0_1, [Score=396, Expect=7e-133]} {RNA1310_80402} Mlig455_062078 {REF} {Length: 1807} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.6]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=356, Expect=3e-115]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=355, Expect=5e-116]} {Mouse: ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=359, Expect=1e-118]; ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=356, Expect=8e-116]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=347, Expect=2e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=394, Expect=3e-132]} {RNA1509_46211} {RNA1310_80402} {RNA815_55704} |
Berezikov Lab - 2020-2021 © ERIBA