TomoSeq data search

Data search

Results for MligTC455_38888

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38888	285	5.95	Mlig455_051699	Neo: - Age: Up-Up-Down		Mlig455_051699 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=35.5]; 50S ribosome-binding GTPase [PF01926.25, score=30.8]; AIG1 family [PF04548.18, score=30.3]; AAA domain [PF13476.8, score=22.7]; Type II/IV secretion system protein [PF00437.22, score=22.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.8]; ATPase domain predominantly from Archaea [PF01637.20, score=20.0]; ABC transporter [PF00005.29, score=19.6]; RsgA GTPase [PF03193.18, score=19.4]; AAA domain [PF13245.8, score=19.4]; AAA domain [PF13401.8, score=19.2]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Celegans: WBGene00015956, C18B2.5, [Score=78.2, Expect=2e-14]} {RNA1509_21324} {RNA1310_2983, RNA1509_21324} {RNA1509_21324, RNA815_977}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38888

285

5.95

Mlig455_051699

Neo: -

Age: Up-Up-Down

Mlig455_051699 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=35.5]; 50S ribosome-binding GTPase [PF01926.25, score=30.8]; AIG1 family [PF04548.18, score=30.3]; AAA domain [PF13476.8, score=22.7]; Type II/IV secretion system protein [PF00437.22, score=22.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.8]; ATPase domain predominantly from Archaea [PF01637.20, score=20.0]; ABC transporter [PF00005.29, score=19.6]; RsgA GTPase [PF03193.18, score=19.4]; AAA domain [PF13245.8, score=19.4]; AAA domain [PF13401.8, score=19.2]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Celegans: WBGene00015956, C18B2.5, [Score=78.2, Expect=2e-14]} {RNA1509_21324} {RNA1310_2983, RNA1509_21324} {RNA1509_21324, RNA815_977}

Cumulative graph for MligTC455_38888

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.971	3.113	0.05435	0.54433
RegionR2	1.268	3.113	0.17502	0.52291
RegionR3	1.877	3.113	0.00482	0.09274
RegionR4	1.29	3.113	0.11354	0.33430
RegionR5	0.727	3.113	0.39784	0.75439
RegionR6	1.066	3.113	0.21021	0.78774
RegionR7	0.22	3.113	0.77370	1.00000
RegionR8	0.523	3.113	0.64076	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.697	3.113	0.99989	1.00000
RegenerationR2	0.131	3.113	0.79522	0.98809
RegenerationR3	-0.232	3.113	0.67179	0.93763
RegenerationR4	-0.107	3.113	0.84830	1.00000
RegenerationR5	0.568	3.113	0.27336	0.70411
RegenerationR6	-0.061	3.113	0.91971	1.00000
RegenerationBL	-0.288	3.113	0.73671	1.00000
RegenerationTP	1.808	3.113	0.01163	0.18358

Genes with expression patterns similar to MligTC455_38888

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38888	285	5.95	Mlig455_051699	Neo: - Age: Up-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051699 {REF} {Length: 5002} {TRANSSPLICED} {Pfam: Septin [PF00735.20, score=35.5]; 50S ribosome-binding GTPase [PF01926.25, score=30.8]; AIG1 family [PF04548.18, score=30.3]; AAA domain [PF13476.8, score=22.7]; Type II/IV secretion system protein [PF00437.22, score=22.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.8]; ATPase domain predominantly from Archaea [PF01637.20, score=20.0]; ABC transporter [PF00005.29, score=19.6]; RsgA GTPase [PF03193.18, score=19.4]; AAA domain [PF13245.8, score=19.4]; AAA domain [PF13401.8, score=19.2]; P-loop containing region of AAA domain [PF13555.8, score=18.8]} {Celegans: WBGene00015956, C18B2.5, [Score=78.2, Expect=2e-14]} {RNA1509_21324} {RNA1310_2983, RNA1509_21324} {RNA1509_21324, RNA815_977}
2.	MligTC455_37485	40	0.83	Mlig455_048613	Neo: Int S/G2/M Age: - Region-enriched R5: 4.066/0.01675	RAD50	0.97	-	-	-	-	0.970	-	Mlig455_048613 {REF} {Length: 1660} {Human: ENSG00000113522, RAD50, RAD50 double strand break repair protein, [Score=150, Expect=2e-40]; ENSG00000283782, AC116366.3, novel protein, [Score=150, Expect=2e-40]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=150, Expect=1e-40]} {Dmel: FBgn0034728, rad50, [Score=137, Expect=2e-36]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [Score=92.4, Expect=6e-21]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [Score=157, Expect=1e-43]} {RNA1509_46929} {RNA1310_1701} {RNA815_40610}
3.	MligTC455_47903	1838	38.28	Mlig455_014075	Neo: Neoblast Age: - Region-enriched R5: 1.463/0.00044		0.958	-	-	-	-	0.958	-	Mlig455_014075 {REF} {Length: 4449} {RNA1509_13784, RNA1509_17452, RNA1509_23159} {RNA1310_3981.1, RNA1509_13784, RNA1509_17452} {RNA1509_13784, RNA1509_17452, RNA815_7553}
4.	MligTC455_51829	46	0.96	Mlig455_016891	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_016891 {REF} {Length: 5321} {Pfam: THAP domain [PF05485.14, score=38.3]} {RNA1509_57489} {RNA1310_20033} {RNA815_46440}
5.	MligTC455_12710	210	4.37	Mlig455_024851	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.218 Region-enriched R3: 4.122/0.01130 Region-enriched R5: 3.991/0.00222 Region-enriched R4: 3.139/0.03299		0.954	-	-	-	-	0.954	-	Mlig455_024851 {REF} {Length: 1266} {RNA1509_35083} {RNA1310_70627.1} {RNA815_15963}
6.	MligTC455_44337	541	11.27	Mlig455_064876	Neo: - Age: Up-Down-Up Region-enriched R6: 2.501/0.00205 Region-enriched R5: 2.289/0.00060		0.95	-	-	-	-	0.950	-	Mlig455_064876 {REF} {Length: 2587} {RNA1509_25494} {RNA1310_37845} {RNA815_17626}