TomoSeq data search

Data search

Results for MligTC455_38909

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_38909	344	7.18	Mlig455_051074	Neo: - Age: -		Mlig455_051074 {REF} {Length: 3724} {TRANSSPLICED} {Smed: dd_Smed_v6_5717_0_1, dd_Smed_v6_5717_0_1, [RH, Score=73.9, Expect=2e-13]} {RNA1509_10640, RNA1509_47509} {RNA1310_3931, RNA1509_47509} {RNA1509_47509, RNA815_7612}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_38909

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.193	3.431	0.90334	1.00000
RegionR2	0.44	3.431	0.44449	0.83307
RegionR3	-0.391	3.431	0.39661	0.92645
RegionR4	0.683	3.431	0.23563	0.52997
RegionR5	0.481	3.431	0.21051	0.50677
RegionR6	0.116	3.431	0.80340	1.00000
RegionR7	-0.154	3.431	0.80531	1.00000
RegionR8	-1.369	3.431	0.12249	0.64288

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.276	3.431	0.33460	1.00000
RegenerationR2	-0.025	3.431	0.95367	1.00000
RegenerationR3	0.944	3.431	0.05368	0.39879
RegenerationR4	0.047	3.431	0.93566	1.00000
RegenerationR5	0.383	3.431	0.35281	0.76594
RegenerationR6	0.067	3.431	0.89090	1.00000
RegenerationBL	-0.506	3.431	0.57721	0.93006
RegenerationTP	0.202	3.431	0.80532	1.00000

Genes with expression patterns similar to MligTC455_38909

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38909	344	7.18	Mlig455_051074	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_051074 {REF} {Length: 3724} {TRANSSPLICED} {Smed: dd_Smed_v6_5717_0_1, dd_Smed_v6_5717_0_1, [RH, Score=73.9, Expect=2e-13]} {RNA1509_10640, RNA1509_47509} {RNA1310_3931, RNA1509_47509} {RNA1509_47509, RNA815_7612}
2.	MligTC455_18696	206	4.3	Mlig455_018132	Neo: - Age: -	C2orf16	0.962	-	-	-	-	0.962	-	Mlig455_018132 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=30.9]} {Human: ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [RH, Score=112, Expect=9e-25]; ENSG00000169249, ZRSR2, zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2, [RH, Score=109, Expect=1e-24]} {Mouse: ENSMUSG00000044068, Zrsr1, zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1, [RH, Score=113, Expect=2e-26]} {Dmel: FBgn0031628, CG3294, [RH, Score=110, Expect=2e-25]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [Score=79.0, Expect=5e-16]} {Smed: dd_Smed_v6_9455_0_3, dd_Smed_v6_9455_0_3, [RH, Score=133, Expect=6e-34]} {RNA1509_44063} {RNA1310_9280} {RNA815_19791.1}
3.	MligTC455_48841	1027	21.4	Mlig455_011191, Mlig455_011220, Mlig455_024752	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.739	RPF1	0.95	-	-	-	-	-	0.950	Mlig455_011191 {REF} {Length: 5251} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759} Mlig455_011220 {REF} {Length: 5225} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759} Mlig455_024752 {REF} {Length: 4561} {Pfam: Brix domain [PF04427.20, score=63.4]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=211, Expect=3e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=3e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=4e-57]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=4e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=167, Expect=3e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_38909

344

7.18

Mlig455_051074

Neo: -

Age: -

1.000

MligTC455_18696

206

4.3

Mlig455_018132

Neo: -

Age: -

C2orf16

0.962

Mlig455_018132 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=30.9]} {Human: ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [RH, Score=112, Expect=9e-25]; ENSG00000169249, ZRSR2, zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2, [RH, Score=109, Expect=1e-24]} {Mouse: ENSMUSG00000044068, Zrsr1, zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1, [RH, Score=113, Expect=2e-26]} {Dmel: FBgn0031628, CG3294, [RH, Score=110, Expect=2e-25]} {Celegans: WBGene00006698, uaf-2, U2AF splicing factor, [Score=79.0, Expect=5e-16]} {Smed: dd_Smed_v6_9455_0_3, dd_Smed_v6_9455_0_3, [RH, Score=133, Expect=6e-34]} {RNA1509_44063} {RNA1310_9280} {RNA815_19791.1}

MligTC455_48841

1027

21.4

Mlig455_011191, Mlig455_011220, Mlig455_024752

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.739

RPF1

0.95

0.950

Mlig455_011191 {REF} {Length: 5251} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759}

Mlig455_011220 {REF} {Length: 5225} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=63.3]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=210, Expect=9e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=8e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=1e-56]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=6e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=166, Expect=8e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759}

Mlig455_024752 {REF} {Length: 4561} {Pfam: Brix domain [PF04427.20, score=63.4]} {Human: ENSG00000117133, RPF1, ribosome production factor 1 homolog, [RH, Score=211, Expect=3e-65]} {Mouse: ENSMUSG00000028187, Rpf1, ribosome production factor 1 homolog, [RH, Score=207, Expect=3e-64]} {Dmel: FBgn0032408, CG6712, [RH, Score=190, Expect=4e-57]} {Celegans: WBGene00009711, F44G4.1, Brix domain-containing protein F44G4.1, [RH, Score=195, Expect=4e-59]} {Smed: dd_Smed_v6_9839_0_1, dd_Smed_v6_9839_0_1, [RH, Score=167, Expect=3e-49]} {RNA1509_15262} {RNA1310_12113.1} {RNA815_12759}