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Results for MligTC455_38961

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38961 1294 26.95 Mlig455_047120

Neo: -

Age: -

 PRPF40A Mlig455_047120 {REF} {Length: 3949} {TRANSSPLICED} {Pfam: FF domain [PF01846.21, score=121.5]; WW domain [PF00397.28, score=56.5]} {Human: ENSG00000196504, PRPF40A, pre-mRNA processing factor 40 homolog A, [RH, Score=365, Expect=1e-110]; ENSG00000110844, PRPF40B, pre-mRNA processing factor 40 homolog B, [RH, Score=357, Expect=2e-108]} {Mouse: ENSMUSG00000061136, Prpf40a, pre-mRNA processing factor 40A, [RH, Score=434, Expect=1e-137]} {Dmel: FBgn0031492, CG3542, [RH, Score=442, Expect=5e-142]} {Celegans: WBGene00014218, ZK1098.1, WW domain-containing protein ZK1098.1, [RH, Score=323, Expect=8e-98]} {Smed: dd_Smed_v6_1909_1_1, dd_Smed_v6_1909_1_1, [RH, Score=493, Expect=2e-162]} {RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399} {RNA1310_5111, RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399} {RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399, RNA815_7882}

Cumulative graph for MligTC455_38961

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.104 4.935 0.91480 1.00000
RegionR2 0.25 4.935 0.55744 0.92066
RegionR3 -0.514 4.935 0.14828 0.65412
RegionR4 0.018 4.935 0.96184 1.00000
RegionR5 0.147 4.935 0.63022 0.98330
RegionR6 0.05 4.935 0.88589 1.00000
RegionR7 -0.25 4.935 0.60039 1.00000
RegionR8 0.403 4.935 0.45595 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.569 4.935 0.16136 0.90401
RegenerationR2 1.065 4.935 0.00342 0.08962
RegenerationR3 1.2 4.935 0.00420 0.11699
RegenerationR4 0.651 4.935 0.10574 0.50155
RegenerationR5 0.462 4.935 0.21680 0.65168
RegenerationR6 1.307 4.935 0.00085 0.03162
RegenerationBL 1.267 4.935 0.00287 0.04550
RegenerationTP 0.719 4.935 0.14316 0.56413


Genes with expression patterns similar to MligTC455_38961

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38961 1294 26.95 Mlig455_047120

Neo: -

Age: -

 PRPF40A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047120 {REF} {Length: 3949} {TRANSSPLICED} {Pfam: FF domain [PF01846.21, score=121.5]; WW domain [PF00397.28, score=56.5]} {Human: ENSG00000196504, PRPF40A, pre-mRNA processing factor 40 homolog A, [RH, Score=365, Expect=1e-110]; ENSG00000110844, PRPF40B, pre-mRNA processing factor 40 homolog B, [RH, Score=357, Expect=2e-108]} {Mouse: ENSMUSG00000061136, Prpf40a, pre-mRNA processing factor 40A, [RH, Score=434, Expect=1e-137]} {Dmel: FBgn0031492, CG3542, [RH, Score=442, Expect=5e-142]} {Celegans: WBGene00014218, ZK1098.1, WW domain-containing protein ZK1098.1, [RH, Score=323, Expect=8e-98]} {Smed: dd_Smed_v6_1909_1_1, dd_Smed_v6_1909_1_1, [RH, Score=493, Expect=2e-162]} {RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399} {RNA1310_5111, RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399} {RNA1509_31152, RNA1509_34321, RNA1509_37569, RNA1509_4399, RNA815_7882}
2. MligTC455_44475 2592 54 Mlig455_006353, Mlig455_006402

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.652

Regeneration-enriched BL: 1.652

 PLRG1 1.672 - - 0.713 0.959 - -

Mlig455_006353 {REF} {Length: 1600} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=150.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]; Nup133 N terminal like [PF08801.13, score=20.1]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.6]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=523, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=464, Expect=7e-162]} {RNA1509_33802, RNA1509_8487} {RNA1310_19706, RNA1509_33802, RNA1509_8487} {RNA1509_33802, RNA1509_8487, RNA815_8176}

Mlig455_006402 {REF} {Length: 1604} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=151.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.0]; Nup133 N terminal like [PF08801.13, score=20.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.4]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=525, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=468, Expect=3e-163]} {RNA1509_33802} {RNA1310_19706} {RNA815_8176}
3. MligTC455_04274 93 1.94 Mlig455_016312

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_016312 {REF} {Length: 2266} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.7]} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1}
4. MligTC455_40100 2423 50.49 Mlig455_051103

Neo: -

Age: logFC(26M/2M)=0.349

 G3BP2 0.961 - - - 0.961 - - Mlig455_051103 {REF} {Length: 2299} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=85.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.3]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=162, Expect=4e-44]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=163, Expect=2e-44]} {Dmel: FBgn0015778, rin, rasputin, [RH, Score=141, Expect=7e-36]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [Score=58.9, Expect=4e-09]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [RH, Score=132, Expect=5e-34]} {RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256} {RNA1310_10257, RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256} {RNA1509_13395, RNA1509_30888, RNA1509_3175, RNA1509_37734, RNA1509_48256, RNA815_10851}

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