Data search
Results for MligTC455_38962
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38962 | 718 | 14.96 | Mlig455_049665 | Neo: - Age: - Regeneration-upregulated BL: 1.705 Regeneration-enriched BL: 1.705 |
Mlig455_049665 {REF} {Length: 216} {NoTransDecoderORF} {RNA1509_23074} {RNA1310_56916} {RNA815_31109} |
Cumulative graph for MligTC455_38962
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.644 | 4.123 | 0.59041 | 1.00000 | |
| RegionR2 | 0.02 | 4.123 | 0.96069 | 1.00000 | |
| RegionR3 | 0.171 | 4.123 | 0.62709 | 1.00000 | |
| RegionR4 | 0.821 | 4.123 | 0.03497 | 0.15135 | |
| RegionR5 | 0.996 | 4.123 | 0.00065 | 0.00723 | |
| RegionR6 | 0.122 | 4.123 | 0.74177 | 1.00000 | |
| RegionR7 | -1.087 | 4.123 | 0.07625 | 0.53299 | |
| RegionR8 | -0.4 | 4.123 | 0.55348 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.201 | 4.123 | 0.91321 | 1.00000 | |
| RegenerationR2 | -0.166 | 4.123 | 0.62245 | 0.92413 | |
| RegenerationR3 | 0.484 | 4.123 | 0.17801 | 0.61322 | |
| RegenerationR4 | 0.034 | 4.123 | 0.92333 | 1.00000 | |
| RegenerationR5 | 0.485 | 4.123 | 0.09962 | 0.48144 | |
| RegenerationR6 | 1.107 | 4.123 | 0.00221 | 0.05340 | |
| RegenerationBL | 1.705 | 4.123 | 0.00013 | 0.00560 | Specific for BL: 1.705 |
| RegenerationTP | 1.351 | 4.123 | 0.01465 | 0.20717 |
Genes with expression patterns similar to MligTC455_38962
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38962 | 718 | 14.96 | Mlig455_049665 | Neo: - Age: - Regeneration-upregulated BL: 1.705 Regeneration-enriched BL: 1.705 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049665 {REF} {Length: 216} {NoTransDecoderORF} {RNA1509_23074} {RNA1310_56916} {RNA815_31109} | |
| 2. | MligTC455_38963 | 758 | 15.78 | Mlig455_052833 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.716 Regeneration-enriched BL: 1.716 |
5.95 | 0.993 | 0.991 | 1.000 | 0.982 | 0.996 | 0.988 | Mlig455_052833 {REF} {Length: 3672} {TRANSSPLICED} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=53.5, Expect=4e-07]; ENSMUSG00000032621, Srek1, splicing regulatory glutamine/lysine-rich protein 1, [Score=52.4, Expect=2e-07]; ENSMUSG00000004110, Cacna1e, calcium channel, voltage-dependent, R type, alpha 1E subunit, [Score=51.6, Expect=3e-06]} {Dmel: FBgn0035617, l(3)psg2, lethal (3) persistent salivary gland 2, [Score=89.4, Expect=3e-18]} {Smed: dd_Smed_v6_10742_0_1, dd_Smed_v6_10742_0_1, [Score=54.3, Expect=2e-07]} {RNA1509_23074, RNA1509_43063, RNA1509_49886, RNA1509_6671} {RNA1310_15393, RNA1509_23074, RNA1509_43063, RNA1509_49886} {RNA1509_23074, RNA1509_43063, RNA1509_49886, RNA815_20040} | |
| 3. | MligTC455_27229 | 13370 | 278.54 | Mlig455_039824 | Neo: - Age: - |
1.738 | - | - | - | 0.952 | 0.786 | - | Mlig455_039824 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=81.0]} {Dmel: FBgn0000308, chic, chickadee, [RH, Score=71.2, Expect=1e-16]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [RH, Score=53.1, Expect=7e-10]} {RNA1509_13103, RNA1509_14242, RNA1509_2164, RNA1509_29915, RNA1509_49690, RNA1509_721} {RNA1310_18604.1, RNA1509_13103, RNA1509_14242, RNA1509_2164, RNA1509_29915, RNA1509_49690, RNA1509_721} {RNA1509_13103, RNA1509_14242, RNA1509_2164, RNA1509_29915, RNA1509_49690, RNA1509_721, RNA815_6779} | |
| 4. | MligTC455_44178 | 689 | 14.34 | Mlig455_011679 | Neo: - Age: - Region-enriched R5: 1.479/0.00020 |
1.706 | - | - | - | 0.749 | - | 0.957 | Mlig455_011679 {REF} {Length: 1157} {NoTransDecoderORF} {RNA1509_26459} {RNA1310_18996.2} {RNA815_12555.1} | |
| 5. | MligTC455_44466 | 754 | 15.72 | Mlig455_016317 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.957/0.00000 |
HMCN1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_016317 {REF} {Length: 3731} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=135.0]; Spondin-like TSP1 domain [PF19028.2, score=100.0]; CCN3 Nov like TSP1 domain [PF19035.2, score=39.9]; Thrombospondin type 1 domain [PF19030.2, score=32.2]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=161, Expect=4e-41]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=132, Expect=2e-31]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=70.1, Expect=4e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=120, Expect=3e-28]} {Smed: dd_Smed_v6_2783_0_1, dd_Smed_v6_2783_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_46355} {RNA1310_4790} {RNA815_4915} |
| 6. | MligTC455_18985 | 1047 | 21.81 | Mlig455_047810, Mlig455_047887 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.259 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_047810 {REF} {Length: 4124} {TRANSSPLICED} {RNA1509_13530} {RNA1310_17873} {RNA815_31659} Mlig455_047887 {REF} {Length: 3562} {TRANSSPLICED} {RNA1509_13530, RNA1509_40551, RNA1509_46635, RNA1509_49576} {RNA1310_17873, RNA1509_13530, RNA1509_40551, RNA1509_46635, RNA1509_49576} {RNA1509_13530, RNA1509_40551, RNA1509_46635, RNA1509_49576, RNA815_31659} |
|
| 7. | MligTC455_39545 | 2660 | 55.42 | Mlig455_053777 | Neo: Int S/G2/M Age: - |
FTSJ3 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_053777 {REF} {Length: 2727} {TRANSSPLICED} {Pfam: FtsJ-like methyltransferase [PF01728.21, score=176.6]; Spb1 C-terminal domain [PF07780.14, score=169.2]; Domain of unknown function (DUF3381) [PF11861.10, score=95.3]} {Human: ENSG00000108592, FTSJ3, FtsJ RNA methyltransferase homolog 3, [RH, Score=218, Expect=5e-66]} {Mouse: ENSMUSG00000020706, Ftsj3, FtsJ RNA methyltransferase homolog 3 (E. coli), [RH, Score=359, Expect=6e-111]} {Dmel: FBgn0030720, CG8939, [RH, Score=466, Expect=3e-152]} {Celegans: WBGene00019168, H06I04.3, Putative rRNA methyltransferase, [RH, Score=355, Expect=6e-110]} {Smed: dd_Smed_v6_3186_0_1, dd_Smed_v6_3186_0_1, [RH, Score=461, Expect=5e-150]} {RNA1509_2530, RNA1509_30440, RNA1509_32146} {RNA1310_6941.1, RNA1509_2530, RNA1509_30440, RNA1509_32146} {RNA1509_2530, RNA1509_30440, RNA1509_32146, RNA815_2244} |
| 8. | MligTC455_46001 | 554 | 11.55 | Mlig455_051037 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.114/0.00703 |
0.953 | - | - | - | 0.953 | - | - | Mlig455_051037 {REF} {Length: 1572} {Pfam: LSM domain [PF01423.24, score=27.5]} {RNA1509_50336} {RNA1310_38539.1} {RNA815_41179} |
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