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Results for MligTC455_39037

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39037 87 1.80 Mlig455_065977

Neo: -

Age: -

 MID1 Mlig455_065977 {REF} {Length: 2619} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.7]; RING-type zinc-finger [PF13445.8, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.1]; zinc-RING finger domain [PF14634.8, score=28.9]; Ring finger domain [PF13639.8, score=28.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.6]; Prokaryotic RING finger family 4 [PF14447.8, score=23.7]; U-box domain [PF04564.17, score=21.5]; B-box zinc finger [PF00643.26, score=21.1]} {Human: ENSG00000101871, MID1, midline 1, [RH, Score=80.9, Expect=3e-15]} {Mouse: ENSMUSG00000000266, Mid2, midline 2, [Score=82.8, Expect=7e-16]; ENSMUSG00000035299, Mid1, midline 1, [Score=82.8, Expect=6e-16]} {Dmel: FBgn0265356, tn, thin, [Score=54.3, Expect=4e-07]} {Celegans: WBGene00016539, madd-2, [Score=63.5, Expect=4e-10]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_31988} {RNA1310_8538} {RNA815_4019.1}

Cumulative graph for MligTC455_39037

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.807 1.719 0.75364 1.00000
RegionR2 0.575 1.719 0.60728 0.95593
RegionR3 -0.164 1.719 0.89900 1.00000
RegionR4 -1.474 1.719 0.22980 0.52230
RegionR5 -0.134 1.719 0.86947 1.00000
RegionR6 0.346 1.719 0.72134 1.00000
RegionR7 -0.531 1.719 0.72508 1.00000
RegionR8 0.574 1.719 0.70586 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.277 1.719 0.27208 0.97545
RegenerationR2 -0.619 1.719 0.57386 0.90383
RegenerationR3 -1.199 1.719 0.33231 0.75775
RegenerationR4 -1.901 1.719 0.13329 0.55160
RegenerationR5 -2.011 1.719 0.08394 0.44779
RegenerationR6 -1.251 1.719 0.28591 0.63605
RegenerationBL -0.758 1.719 0.56252 0.91720
RegenerationTP -4.962 1.719 0.05149 0.37174


Genes with expression patterns similar to MligTC455_39037

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39037 87 1.8 Mlig455_065977

Neo: -

Age: -

 MID1 4 1.000 1.000 1.000 - 1.000 - Mlig455_065977 {REF} {Length: 2619} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.7]; RING-type zinc-finger [PF13445.8, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.1]; zinc-RING finger domain [PF14634.8, score=28.9]; Ring finger domain [PF13639.8, score=28.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.6]; Prokaryotic RING finger family 4 [PF14447.8, score=23.7]; U-box domain [PF04564.17, score=21.5]; B-box zinc finger [PF00643.26, score=21.1]} {Human: ENSG00000101871, MID1, midline 1, [RH, Score=80.9, Expect=3e-15]} {Mouse: ENSMUSG00000000266, Mid2, midline 2, [Score=82.8, Expect=7e-16]; ENSMUSG00000035299, Mid1, midline 1, [Score=82.8, Expect=6e-16]} {Dmel: FBgn0265356, tn, thin, [Score=54.3, Expect=4e-07]} {Celegans: WBGene00016539, madd-2, [Score=63.5, Expect=4e-10]} {Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=56.6, Expect=3e-08]} {RNA1509_31988} {RNA1310_8538} {RNA815_4019.1}
2. MligTC455_45966 875 18.22 Mlig455_000854

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.228

 SMARCE1 0.968 - - - - 0.968 - Mlig455_000854 {REF} {Length: 2300} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=53.8]; HMG-box domain [PF09011.12, score=22.9]} {Human: ENSG00000073584, SMARCE1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=118, Expect=6e-30]} {Mouse: ENSMUSG00000037935, Smarce1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, [Score=118, Expect=1e-29]} {Dmel: FBgn0030093, Bap111, Brahma associated protein 111kD, [Score=101, Expect=3e-23]} {Celegans: WBGene00022182, swsn-3, SWI/SNF nucleosome remodeling complex component, [Score=83.2, Expect=8e-18]} {Smed: dd_Smed_v6_5085_0_1, dd_Smed_v6_5085_0_1, [Score=144, Expect=6e-38]} {RNA1509_13171, RNA1509_53246} {RNA1310_8835.1, RNA1509_13171, RNA1509_53246} {RNA1509_13171, RNA1509_53246, RNA815_5568}
3. MligTC455_42426 389 8.11 Mlig455_014989

Neo: -

Age: -

 PPM1E 0.966 - - - - 0.966 - Mlig455_014989 {REF} {Length: 2697} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=147.9]; Protein phosphatase 2C [PF13672.8, score=31.4]; Stage II sporulation protein E (SpoIIE) [PF07228.14, score=22.0]} {Human: ENSG00000175175, PPM1E, protein phosphatase, Mg2+/Mn2+ dependent 1E, [Score=114, Expect=1e-26]; ENSG00000100034, PPM1F, protein phosphatase, Mg2+/Mn2+ dependent 1F, [Score=109, Expect=1e-25]} {Mouse: ENSMUSG00000046442, Ppm1e, protein phosphatase 1E (PP2C domain containing), [Score=114, Expect=6e-27]} {Dmel: FBgn0032702, CG10376, [RH, Score=127, Expect=4e-32]} {Celegans: WBGene00001412, fem-2, Ca(2+)/calmodulin-dependent protein kinase phosphatase, [RH, Score=107, Expect=3e-25]} {Smed: dd_Smed_v6_4958_0_1, dd_Smed_v6_4958_0_1, [RH, Score=116, Expect=4e-28]} {RNA1509_15705} {RNA1310_7889} {RNA815_4689.1}
4. MligTC455_24748 687 14.31 Mlig455_015955

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.392

Region-enriched R4: 1.134/0.03886

 SAP18 0.956 - - - - 0.956 - Mlig455_015955 {REF} {Length: 1990} {TRANSSPLICED} {Pfam: Sin3 associated polypeptide p18 (SAP18) [PF06487.14, score=138.7]} {Human: ENSG00000150459, SAP18, Sin3A associated protein 18, [RH, Score=160, Expect=1e-49]} {Mouse: ENSMUSG00000021963, Sap18, Sin3-associated polypeptide 18, [RH, Score=161, Expect=3e-50]; ENSMUSG00000061104, Sap18b, Sin3-associated polypeptide 18B, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0024491, Bin1, Bicoid interacting protein 1, [RH, Score=176, Expect=2e-56]} {Celegans: WBGene00007625, C16C10.4, Probable histone deacetylase complex subunit SAP18, [RH, Score=139, Expect=9e-42]} {Smed: dd_Smed_v6_3735_0_1, dd_Smed_v6_3735_0_1, [RH, Score=155, Expect=1e-48]} {RNA1509_13828, RNA1509_36271} {RNA1310_43343, RNA1509_36271} {RNA1509_36271, RNA815_22022.2}

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