Data search
Results for MligTC455_39063
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39063 | 270 | 5.63 | Mlig455_000223 | Neo: - Age: - |
Mlig455_000223 {REF} {Length: 1554} {Pfam: FHA domain [PF00498.28, score=41.0]} {Celegans: WBGene00007227, C01G6.5, [RH, Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [Score=86.3, Expect=3e-18]} {RNA1509_35194} {RNA1310_28120} {RNA815_26411} |
Cumulative graph for MligTC455_39063
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.744 | 3.021 | 0.75993 | 1.00000 | |
| RegionR2 | -0.498 | 3.021 | 0.72053 | 1.00000 | |
| RegionR3 | 0.064 | 3.021 | 0.95422 | 1.00000 | |
| RegionR4 | 1.043 | 3.021 | 0.40245 | 0.72907 | |
| RegionR5 | 0.492 | 3.021 | 0.62767 | 0.98110 | |
| RegionR6 | -0.222 | 3.021 | 0.84103 | 1.00000 | |
| RegionR7 | 0.829 | 3.021 | 0.42223 | 1.00000 | |
| RegionR8 | -0.965 | 3.021 | 0.50248 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.042 | 3.021 | 0.40758 | 1.00000 | |
| RegenerationR2 | -0.55 | 3.021 | 0.65547 | 0.93869 | |
| RegenerationR3 | -0.542 | 3.021 | 0.67730 | 0.93962 | |
| RegenerationR4 | -0.589 | 3.021 | 0.65215 | 0.93431 | |
| RegenerationR5 | 0.438 | 3.021 | 0.72077 | 0.95966 | |
| RegenerationR6 | -1.423 | 3.021 | 0.31215 | 0.65989 | |
| RegenerationBL | 0.229 | 3.021 | 0.85484 | 1.00000 | |
| RegenerationTP | -0.1 | 3.021 | 0.94516 | 1.00000 |
Genes with expression patterns similar to MligTC455_39063
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39063 | 270 | 5.63 | Mlig455_000223 | Neo: - Age: - |
5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_000223 {REF} {Length: 1554} {Pfam: FHA domain [PF00498.28, score=41.0]} {Celegans: WBGene00007227, C01G6.5, [RH, Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [Score=86.3, Expect=3e-18]} {RNA1509_35194} {RNA1310_28120} {RNA815_26411} | |
| 2. | MligTC455_19790 | 181 | 3.76 | Mlig455_029032 | Neo: Irradiation Age: - |
DSCC1 | 1.756 | - | - | - | - | 0.971 | 0.785 | Mlig455_029032 {REF} {Length: 1874} {TRANSSPLICED} {Pfam: Sister chromatid cohesion protein Dcc1 [PF09724.11, score=239.4]} {Human: ENSG00000136982, DSCC1, DNA replication and sister chromatid cohesion 1, [RH, Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000022422, Dscc1, DNA replication and sister chromatid cohesion 1, [RH, Score=150, Expect=6e-41]} {Dmel: FBgn0034495, CG11788, [RH, Score=160, Expect=9e-45]} {Smed: dd_Smed_v6_17862_0_1, dd_Smed_v6_17862_0_1, [RH, Score=115, Expect=1e-28]} {RNA1509_25901} {RNA1310_20900, RNA1509_25901} {RNA1509_25901, RNA815_6930} |
| 3. | MligTC455_29330 | 754 | 15.72 | Mlig455_048535 | Neo: - Age: - |
GALM | 0.981 | - | - | - | - | - | 0.981 | Mlig455_048535 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: Aldose 1-epimerase [PF01263.22, score=253.5]} {Human: ENSG00000143891, GALM, galactose mutarotase, [RH, Score=211, Expect=2e-65]} {Mouse: ENSMUSG00000035473, Galm, galactose mutarotase, [RH, Score=219, Expect=2e-68]} {Dmel: FBgn0035679, CG10467, [RH, Score=204, Expect=1e-62]} {Celegans: WBGene00015270, C01B4.6, Aldose 1-epimerase, [RH, Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_1947_0_1, dd_Smed_v6_1947_0_1, [RH, Score=230, Expect=3e-73]} {RNA1509_4752} {RNA1310_11054.1} {RNA815_7761} |
| 4. | MligTC455_29235 | 1326 | 27.62 | Mlig455_054897 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.257 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_054897 {REF} {Length: 3985} {TRANSSPLICED} {RNA1509_19454, RNA1509_29269, RNA1509_31022, RNA1509_41921} {RNA1310_7262.1, RNA1509_19454, RNA1509_29269, RNA1509_31022, RNA1509_41921} {RNA1509_19454, RNA1509_29269, RNA1509_31022, RNA1509_41921, RNA815_9716} | |
| 5. | MligTC455_52368 | 1098 | 22.88 | Mlig455_051545 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.466/0.00013 |
TRMT12 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_051545 {REF} {Length: 1953} {Pfam: Met-10+ like-protein [PF02475.18, score=78.7]; Methyltransferase domain [PF13649.8, score=27.2]; Methyltransferase small domain [PF05175.16, score=21.0]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000183665, TRMT12, tRNA methyltransferase 12 homolog, [RH, Score=173, Expect=3e-47]} {Mouse: ENSMUSG00000037085, Trmt12, tRNA methyltranferase 12, [RH, Score=172, Expect=5e-47]} {Celegans: WBGene00009586, F40F9.10, [RH, Score=125, Expect=8e-31]} {Smed: dd_Smed_v6_8323_0_1, dd_Smed_v6_8323_0_1, [RH, Score=150, Expect=1e-40]} {RNA1509_9186} {RNA1310_24249} {RNA815_28668} |
| 6. | MligTC455_27797 | 878 | 18.29 | Mlig455_032097 | Neo: Int S/G2/M Age: Down-Down-Up |
HGH1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_032097 {REF} {Length: 1661} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF383) [PF04063.16, score=61.7]; Domain of unknown function (DUF384) [PF04064.15, score=46.9]} {Human: ENSG00000235173, HGH1, HGH1 homolog, [RH, Score=107, Expect=3e-25]} {Mouse: ENSMUSG00000022554, Hgh1, HGH1 homolog, [RH, Score=100, Expect=6e-23]} {Celegans: WBGene00021900, Y54H5A.2, [Score=58.2, Expect=3e-09]} {RNA1509_20599} {RNA1310_524.1, RNA1509_20599} {RNA1509_20599, RNA815_9894.1} |
| 7. | MligTC455_46127 | 479 | 9.97 | Mlig455_003657 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.680 Region-enriched R5: 1.796/0.00007 |
N6AMT1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_003657 {REF} {Length: 783} {Human: ENSG00000156239, N6AMT1, N-6 adenine-specific DNA methyltransferase 1, [RH, Score=132, Expect=7e-38]} {Mouse: ENSMUSG00000044442, N6amt1, N-6 adenine-specific DNA methyltransferase 1 (putative), [RH, Score=134, Expect=9e-39]} {Dmel: FBgn0031454, CG9960, [RH, Score=137, Expect=4e-40]} {Celegans: WBGene00016341, mtq-2, MethylTransferase modifying glutamine (Q), [RH, Score=98.2, Expect=4e-25]} {Smed: dd_Smed_v6_17664_0_1, dd_Smed_v6_17664_0_1, [RH, Score=65.1, Expect=2e-13]} {RNA1509_18833} {RNA1310_35194.1} {RNA815_23131} |
Berezikov Lab - 2020-2021 © ERIBA