Data search
Results for MligTC455_39083
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39083 | 1273 | 26.53 | Mlig455_052551 | Neo: - Age: - |
RHOA | Mlig455_052551 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=130.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=50.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.8]; ADP-ribosylation factor family [PF00025.23, score=20.7]; Cas9 alpha-helical lobe domain [PF18470.3, score=18.5]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [Score=249, Expect=2e-83]; ENSG00000155366, RHOC, ras homolog family member C, [Score=248, Expect=1e-82]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [Score=249, Expect=1e-83]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [Score=248, Expect=7e-83]} {Dmel: FBgn0014020, Rho1, [Score=241, Expect=3e-80]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [Score=232, Expect=8e-77]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [Score=249, Expect=1e-83]} {RNA1509_24154} {RNA1310_16035.1} {RNA815_21490.1} |
Cumulative graph for MligTC455_39083
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.825 | 4.96 | 0.38966 | 1.00000 | |
| RegionR2 | 0.076 | 4.96 | 0.85069 | 1.00000 | |
| RegionR3 | 0.195 | 4.96 | 0.56097 | 1.00000 | |
| RegionR4 | 0.811 | 4.96 | 0.04102 | 0.16848 | |
| RegionR5 | 0.248 | 4.96 | 0.44368 | 0.80482 | |
| RegionR6 | 0.062 | 4.96 | 0.85769 | 1.00000 | |
| RegionR7 | -0.193 | 4.96 | 0.65947 | 1.00000 | |
| RegionR8 | -0.374 | 4.96 | 0.50560 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.092 | 4.96 | 0.94694 | 1.00000 | |
| RegenerationR2 | -0.747 | 4.96 | 0.04042 | 0.33185 | |
| RegenerationR3 | -0.133 | 4.96 | 0.72873 | 0.95745 | |
| RegenerationR4 | -0.097 | 4.96 | 0.80213 | 0.98720 | |
| RegenerationR5 | 0.326 | 4.96 | 0.36803 | 0.77874 | |
| RegenerationR6 | 0.46 | 4.96 | 0.23739 | 0.58501 | |
| RegenerationBL | -0.099 | 4.96 | 0.82375 | 1.00000 | |
| RegenerationTP | 0.667 | 4.96 | 0.15031 | 0.57447 |
Genes with expression patterns similar to MligTC455_39083
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39083 | 1273 | 26.53 | Mlig455_052551 | Neo: - Age: - |
RHOA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052551 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=130.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=50.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.8]; ADP-ribosylation factor family [PF00025.23, score=20.7]; Cas9 alpha-helical lobe domain [PF18470.3, score=18.5]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [Score=249, Expect=2e-83]; ENSG00000155366, RHOC, ras homolog family member C, [Score=248, Expect=1e-82]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [Score=249, Expect=1e-83]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [Score=248, Expect=7e-83]} {Dmel: FBgn0014020, Rho1, [Score=241, Expect=3e-80]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [Score=232, Expect=8e-77]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [Score=249, Expect=1e-83]} {RNA1509_24154} {RNA1310_16035.1} {RNA815_21490.1} |
| 2. | MligTC455_19873 | 2679 | 55.82 | Mlig455_014018 | Neo: - Age: - Region-enriched R5: 1.097/0.00005 |
DCUN1D1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_014018 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Cullin binding [PF03556.17, score=102.9]; UBA-like domain [PF14555.8, score=32.7]} {Human: ENSG00000043093, DCUN1D1, defective in cullin neddylation 1 domain containing 1, [RH, Score=207, Expect=2e-66]; ENSG00000150401, DCUN1D2, defective in cullin neddylation 1 domain containing 2, [RH, Score=200, Expect=2e-63]} {Mouse: ENSMUSG00000027708, Dcun1d1, DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae), [RH, Score=206, Expect=4e-66]; ENSMUSG00000113255, Tes3-ps, testis derived transcript 3, pseudogene, [RH, Score=205, Expect=9e-66]} {Dmel: FBgn0036510, SCCRO, Squamous cell carcinoma-related oncogene, [Score=197, Expect=2e-62]} {Celegans: WBGene00010428, dcn-1, Defective in cullin neddylation protein 1, [RH, Score=156, Expect=2e-46]} {Smed: dd_Smed_v6_3227_0_1, dd_Smed_v6_3227_0_1, [RH, Score=169, Expect=7e-52]} {RNA1509_20851, RNA1509_28821, RNA1509_6535} {RNA1310_14793.1, RNA1509_20851, RNA1509_28821, RNA1509_6535} {RNA1509_20851, RNA1509_28821, RNA1509_6535, RNA815_11960} |
| 3. | MligTC455_42064 | 1381 | 28.77 | Mlig455_051487 | Neo: - Age: - |
FAM120C | 0.956 | - | - | - | 0.956 | - | - | Mlig455_051487 {REF} {Length: 3230} {TRANSSPLICED} {Human: ENSG00000184083, FAM120C, family with sequence similarity 120C, [RH, Score=73.2, Expect=2e-12]} {Mouse: ENSMUSG00000025262, Fam120c, family with sequence similarity 120, member C, [RH, Score=74.7, Expect=4e-13]} {RNA1509_16142, RNA1509_20100, RNA1509_24660, RNA1509_27565, RNA1509_39823} {RNA1310_2303, RNA1509_16142, RNA1509_20100, RNA1509_24660, RNA1509_27565, RNA1509_39823} {RNA1509_16142, RNA1509_20100, RNA1509_24660, RNA1509_27565, RNA1509_39823, RNA815_22810} |
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