TomoSeq data search

Data search

Results for MligTC455_39321

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39321	492	10.25	Mlig455_018310, Mlig455_018320	Neo: - Age: Down-Down-Up Regeneration-downregulated BL: -4.186 Regeneration-depleted BL: -4.186		Mlig455_018310 {REF} {Length: 4289} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179} Mlig455_018320 {REF} {Length: 2258} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_39321

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.692	3.854	0.06183	0.56793
RegionR2	0.477	3.854	0.60309	0.95319
RegionR3	0.737	3.854	0.37568	0.90896
RegionR4	1.244	3.854	0.11263	0.33259
RegionR5	0.607	3.854	0.47251	0.83530
RegionR6	1.356	3.854	0.04576	0.39955
RegionR7	1.723	3.854	0.01476	0.21888
RegionR8	0.549	3.854	0.59914	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.313	3.854	0.99997	1.00000
RegenerationR2	0.063	3.854	0.89208	1.00000
RegenerationR3	0.24	3.854	0.63019	0.92040
RegenerationR4	-0.25	3.854	0.61420	0.91846
RegenerationR5	-0.728	3.854	0.12683	0.53116
RegenerationR6	-1.227	3.854	0.01551	0.15349
RegenerationBL	-4.186	3.854	0.00003	0.00189	Specific for BL: -4.186
RegenerationTP	-0.155	3.854	0.80416	1.00000

Genes with expression patterns similar to MligTC455_39321

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39321	492	10.25	Mlig455_018310, Mlig455_018320	Neo: - Age: Down-Down-Up Regeneration-downregulated BL: -4.186 Regeneration-depleted BL: -4.186		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018310 {REF} {Length: 4289} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179} Mlig455_018320 {REF} {Length: 2258} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179}
2.	MligTC455_21565	688	14.33	Mlig455_059033, Mlig455_070845	Neo: - Age: Down-Down-Up Region-enriched R2: 4.576/0.00020 Region-enriched R3: 3.487/0.00049	GIMAP7	0.955	-	-	-	-	0.955	-	Mlig455_059033 {REF} {Length: 1784} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.7} {Pfam: AIG1 family [PF04548.18, score=136.3]; 50S ribosome-binding GTPase [PF01926.25, score=33.9]; Dynamin family [PF00350.25, score=23.0]; ABC transporter [PF00005.29, score=19.5]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=92.4, Expect=5e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=2e-24]} {RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1310_27258, RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1509_29015, RNA1509_50298, RNA1509_58568, RNA815_8194.1} Mlig455_070845 {REF} {Length: 2397} {Pfam: AIG1 family [PF04548.18, score=133.1]; 50S ribosome-binding GTPase [PF01926.25, score=35.7]; ABC transporter [PF00005.29, score=20.3]; Dynamin family [PF00350.25, score=19.4]; Septin [PF00735.20, score=19.4]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=91.7, Expect=8e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=4e-24]} {RNA1509_50298} {RNA1310_27258} {RNA815_8194.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39321

492

10.25

Mlig455_018310, Mlig455_018320

Neo: -

Age: Down-Down-Up

Regeneration-downregulated BL: -4.186

Regeneration-depleted BL: -4.186

1.000

Mlig455_018310 {REF} {Length: 4289} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179}

Mlig455_018320 {REF} {Length: 2258} {RNA1509_45672} {RNA1310_13633.1} {RNA815_4179}

MligTC455_21565

688

14.33

Mlig455_059033, Mlig455_070845

Neo: -

Age: Down-Down-Up

Region-enriched R2: 4.576/0.00020
Region-enriched R3: 3.487/0.00049

GIMAP7

0.955

Mlig455_059033 {REF} {Length: 1784} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.7} {Pfam: AIG1 family [PF04548.18, score=136.3]; 50S ribosome-binding GTPase [PF01926.25, score=33.9]; Dynamin family [PF00350.25, score=23.0]; ABC transporter [PF00005.29, score=19.5]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=92.4, Expect=5e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=2e-24]} {RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1310_27258, RNA1509_29015, RNA1509_50298, RNA1509_58568} {RNA1509_29015, RNA1509_50298, RNA1509_58568, RNA815_8194.1}

Mlig455_070845 {REF} {Length: 2397} {Pfam: AIG1 family [PF04548.18, score=133.1]; 50S ribosome-binding GTPase [PF01926.25, score=35.7]; ABC transporter [PF00005.29, score=20.3]; Dynamin family [PF00350.25, score=19.4]; Septin [PF00735.20, score=19.4]} {Human: ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=91.7, Expect=8e-21]} {Mouse: ENSMUSG00000043931, Gimap7, GTPase, IMAP family member 7, [RH, Score=100, Expect=4e-24]} {RNA1509_50298} {RNA1310_27258} {RNA815_8194.1}