Data search
Results for MligTC455_39400
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39400 | 189 | 3.94 | Mlig455_042868, Mlig455_049548 | Neo: - Age: logFC(26M/2M)=-0.223 |
PIKFYVE | Mlig455_042868 {REF} {Length: 959} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=44.3]} {Human: ENSG00000115020, PIKFYVE, phosphoinositide kinase, FYVE-type zinc finger containing, [Score=67.4, Expect=1e-12]} {Mouse: ENSMUSG00000025949, Pikfyve, phosphoinositide kinase, FYVE type zinc finger containing, [Score=67.0, Expect=1e-12]} {Celegans: WBGene00004089, ppk-3, PIP Kinase, [Score=60.8, Expect=1e-10]} {Smed: dd_Smed_v6_3136_0_1, dd_Smed_v6_3136_0_1, [Score=61.6, Expect=4e-11]} {RNA1509_22343} {RNA1310_7704} {RNA815_5570} Mlig455_049548 {REF} {Length: 7512} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=127.9]; TCP-1/cpn60 chaperonin family [PF00118.26, score=69.6]; FYVE zinc finger [PF01363.23, score=60.5]} {Human: ENSG00000115020, PIKFYVE, phosphoinositide kinase, FYVE-type zinc finger containing, [RH, Score=306, Expect=3e-83]} {Mouse: ENSMUSG00000025949, Pikfyve, phosphoinositide kinase, FYVE type zinc finger containing, [RH, Score=479, Expect=2e-138]} {Dmel: FBgn0028741, fab1, fab1 kinase, [RH, Score=271, Expect=5e-73]} {Celegans: WBGene00004089, ppk-3, PIP Kinase, [RH, Score=186, Expect=4e-47]} {Smed: dd_Smed_v6_3136_0_1, dd_Smed_v6_3136_0_1, [RH, Score=192, Expect=9e-49]} {RNA1509_12562, RNA1509_49724} {RNA1310_3097.1, RNA1509_49724} {RNA1509_49724, RNA815_5570} |
Cumulative graph for MligTC455_39400
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.205 | 2.687 | 0.14664 | 0.75949 | |
| RegionR2 | 0.951 | 2.687 | 0.39911 | 0.79349 | |
| RegionR3 | 1.6 | 2.687 | 0.06088 | 0.43469 | |
| RegionR4 | 0.66 | 2.687 | 0.53524 | 0.85813 | |
| RegionR5 | 1.406 | 2.687 | 0.08208 | 0.26682 | |
| RegionR6 | 1.261 | 2.687 | 0.17439 | 0.73343 | |
| RegionR7 | 0.396 | 2.687 | 0.69867 | 1.00000 | |
| RegionR8 | -0.069 | 2.687 | 0.88157 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.92 | 2.687 | 0.99987 | 1.00000 | |
| RegenerationR2 | 0.374 | 2.687 | 0.58019 | 0.90705 | |
| RegenerationR3 | 0.273 | 2.687 | 0.69038 | 0.94454 | |
| RegenerationR4 | 0.534 | 2.687 | 0.48579 | 0.86170 | |
| RegenerationR5 | 0.211 | 2.687 | 0.73856 | 0.96794 | |
| RegenerationR6 | -0.372 | 2.687 | 0.63527 | 0.89020 | |
| RegenerationBL | 0.553 | 2.687 | 0.56644 | 0.92095 | |
| RegenerationTP | 0.101 | 2.687 | 0.92781 | 1.00000 |
Genes with expression patterns similar to MligTC455_39400
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39400 | 189 | 3.94 | Mlig455_042868, Mlig455_049548 | Neo: - Age: logFC(26M/2M)=-0.223 |
PIKFYVE | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042868 {REF} {Length: 959} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=44.3]} {Human: ENSG00000115020, PIKFYVE, phosphoinositide kinase, FYVE-type zinc finger containing, [Score=67.4, Expect=1e-12]} {Mouse: ENSMUSG00000025949, Pikfyve, phosphoinositide kinase, FYVE type zinc finger containing, [Score=67.0, Expect=1e-12]} {Celegans: WBGene00004089, ppk-3, PIP Kinase, [Score=60.8, Expect=1e-10]} {Smed: dd_Smed_v6_3136_0_1, dd_Smed_v6_3136_0_1, [Score=61.6, Expect=4e-11]} {RNA1509_22343} {RNA1310_7704} {RNA815_5570} Mlig455_049548 {REF} {Length: 7512} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=127.9]; TCP-1/cpn60 chaperonin family [PF00118.26, score=69.6]; FYVE zinc finger [PF01363.23, score=60.5]} {Human: ENSG00000115020, PIKFYVE, phosphoinositide kinase, FYVE-type zinc finger containing, [RH, Score=306, Expect=3e-83]} {Mouse: ENSMUSG00000025949, Pikfyve, phosphoinositide kinase, FYVE type zinc finger containing, [RH, Score=479, Expect=2e-138]} {Dmel: FBgn0028741, fab1, fab1 kinase, [RH, Score=271, Expect=5e-73]} {Celegans: WBGene00004089, ppk-3, PIP Kinase, [RH, Score=186, Expect=4e-47]} {Smed: dd_Smed_v6_3136_0_1, dd_Smed_v6_3136_0_1, [RH, Score=192, Expect=9e-49]} {RNA1509_12562, RNA1509_49724} {RNA1310_3097.1, RNA1509_49724} {RNA1509_49724, RNA815_5570} |
| 2. | MligTC455_33773 | 156 | 3.25 | Mlig455_029342 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.115/0.00124 |
ZNF383 | 0.973 | 0.973 | - | - | - | - | - | Mlig455_029342 {REF} {Length: 1584} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=220.6]; Zinc finger, C2H2 type [PF00096.28, score=141.7]; C2H2-type zinc finger [PF13894.8, score=120.7]; C2H2-type zinc finger [PF13912.8, score=83.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=78.4]; Zinc-finger of C2H2 type [PF12874.9, score=58.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=35.9]; zinc-finger C2H2-type [PF16622.7, score=33.9]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=30.1]; KIAA1045 RING finger [PF16744.7, score=29.3]; AN1-like Zinc finger [PF01428.18, score=29.2]; BolA-like protein [PF01722.20, score=28.8]; BED zinc finger [PF02892.17, score=27.6]; Zinc ribbon domain [PF09723.12, score=25.4]; Family of unknown function (DUF5830) [PF19148.2, score=23.0]; zinc-ribbon family [PF17032.7, score=22.5]; CB1 cannabinoid receptor-interacting protein 1 [PF15043.8, score=20.0]; Family of unknown function (DUF5810) [PF19126.2, score=19.4]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=19.3]; Zinc-finger domain [PF10276.11, score=18.6]} {Human: ENSG00000188283, ZNF383, zinc finger protein 383, [Score=275, Expect=1e-88]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=271, Expect=2e-87]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=268, Expect=3e-85]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=268, Expect=2e-84]; ENSG00000124613, ZNF391, zinc finger protein 391, [Score=267, Expect=6e-87]; ENSG00000251247, ZNF345, zinc finger protein 345, [Score=266, Expect=6e-85]; ENSG00000196263, ZNF471, zinc finger protein 471, [Score=265, Expect=6e-83]; ENSG00000168661, ZNF30, zinc finger protein 30, [Score=265, Expect=5e-83]; ENSG00000185869, ZNF829, zinc finger protein 829, [Score=265, Expect=4e-85]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=263, Expect=3e-82]; ENSG00000197016, ZNF470, zinc finger protein 470, [Score=262, Expect=5e-81]; ENSG00000283009, ZNF436, zinc finger protein 436, [Score=262, Expect=2e-83]; ENSG00000125945, ZNF436, zinc finger protein 436, [Score=262, Expect=2e-83]; ENSG00000196357, ZNF565, zinc finger protein 565, [Score=262, Expect=8e-83]} {Mouse: ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=273, Expect=7e-88]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=271, Expect=2e-87]; ENSMUSG00000058402, Zfp420, zinc finger protein 420, [Score=269, Expect=2e-85]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=266, Expect=8e-86]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=266, Expect=1e-85]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=266, Expect=7e-86]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=264, Expect=7e-83]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=264, Expect=3e-83]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=264, Expect=3e-83]; ENSMUSG00000037007, Zfp113, zinc finger protein 113, [Score=262, Expect=5e-84]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=261, Expect=4e-80]; ENSMUSG00000072623, Zfp9, zinc finger protein 9, [Score=260, Expect=3e-83]; ENSMUSG00000055305, Zfp93, zinc finger protein 93, [Score=260, Expect=5e-81]} {Dmel: FBgn0032295, CG12299, [Score=202, Expect=9e-59]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=149, Expect=2e-43]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=162, Expect=7e-47]} {RNA1509_7336} {RNA1310_55319} {RNA815_11426.2} |
| 3. | MligTC455_30951 | 136 | 2.82 | Mlig455_008420 | Neo: - Age: Down-Up-Down |
0.966 | 0.966 | - | - | - | - | - | Mlig455_008420 {REF} {Length: 3114} {Pfam: Cupin superfamily (DUF985) [PF06172.13, score=101.5]} {RNA1509_40232} {RNA1310_31259} {RNA815_14468} | |
| 4. | MligTC455_52818 | 520 | 10.84 | Mlig455_022841 | Neo: Int S/G2/M |
IMPDH1 | 0.963 | 0.963 | - | - | - | - | - | Mlig455_022841 {REF} {Length: 3806} {Pfam: IMP dehydrogenase / GMP reductase domain [PF00478.27, score=449.3]; Nitronate monooxygenase [PF03060.17, score=56.0]; CBS domain [PF00571.30, score=41.5]; FMN-dependent dehydrogenase [PF01070.20, score=40.6]; Histidine biosynthesis protein [PF00977.23, score=27.4]; Thiazole biosynthesis protein ThiG [PF05690.16, score=18.4]} {Human: ENSG00000106348, IMPDH1, inosine monophosphate dehydrogenase 1, [RH, Score=790, Expect=0.0]; ENSG00000178035, IMPDH2, inosine monophosphate dehydrogenase 2, [RH, Score=776, Expect=0.0]} {Mouse: ENSMUSG00000003500, Impdh1, inosine monophosphate dehydrogenase 1, [RH, Score=785, Expect=0.0]; ENSMUSG00000062867, Impdh2, inosine monophosphate dehydrogenase 2, [RH, Score=773, Expect=0.0]} {Dmel: FBgn0003204, ras, raspberry, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00020682, T22D1.3, Inosine-5'-monophosphate dehydrogenase, [RH, Score=543, Expect=0.0]} {Smed: dd_Smed_v6_4321_0_2, dd_Smed_v6_4321_0_2, [RH, Score=755, Expect=0.0]} {RNA1509_4134, RNA1509_47560} {RNA1310_8483.1, RNA1509_47560} {RNA1509_47560, RNA815_4082} |
| 5. | MligTC455_41609 | 1411 | 29.4 | Mlig455_005643, Mlig455_008677, Mlig455_008681 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.013/0.00317 |
0.958 | 0.958 | - | - | - | - | - | Mlig455_005643 {REF} {Length: 2329} {TRANSSPLICED} {RNA1509_20030} {RNA1310_15398} {RNA815_6047} Mlig455_008677 {REF} {Length: 1876} {TRANSSPLICED} {RNA1509_20030} {RNA1310_15398, RNA1509_20030} {RNA1509_20030, RNA815_6047} Mlig455_008681 {REF} {Length: 2131} {TRANSSPLICED} {RNA1509_20030} {RNA1310_15398} {RNA815_6047} |
|
| 6. | MligTC455_17891 | 471 | 9.82 | Mlig455_045940 | Neo: - Age: - Region-enriched R4: 1.761/0.00497 |
DCAF10 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_045940 {REF} {Length: 2619} {Human: ENSG00000122741, DCAF10, DDB1 and CUL4 associated factor 10, [RH, Score=89.0, Expect=1e-18]} {Mouse: ENSMUSG00000035572, Dcaf10, DDB1 and CUL4 associated factor 10, [RH, Score=74.7, Expect=9e-14]} {Dmel: FBgn0039601, CG1523, [RH, Score=87.4, Expect=6e-18]} {RNA1509_41304, RNA1509_46888} {RNA1310_2332, RNA1509_41304, RNA1509_46888} {RNA1509_41304, RNA1509_46888, RNA815_18927} |
| 7. | MligTC455_36449 | 215 | 4.47 | Mlig455_015126 | Neo: - Age: - |
CLVS1 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_015126 {REF} {Length: 2923} {Pfam: CRAL/TRIO domain [PF00650.22, score=80.2]; Divergent CRAL/TRIO domain [PF13716.8, score=29.5]; CRAL/TRIO, N-terminal domain [PF03765.17, score=28.0]} {Human: ENSG00000177182, CLVS1, clavesin 1, [RH, Score=176, Expect=3e-51]} {Mouse: ENSMUSG00000041216, Clvs1, clavesin 1, [RH, Score=173, Expect=2e-50]; ENSMUSG00000019785, Clvs2, clavesin 2, [RH, Score=165, Expect=1e-47]} {Dmel: FBgn0032785, CG10026, [Score=91.7, Expect=1e-20]} {Celegans: WBGene00011962, T23G5.2, CRAL-TRIO domain-containing protein T23G5.2, [Score=57.0, Expect=1e-08]} {Smed: dd_Smed_v6_14357_0_1, dd_Smed_v6_14357_0_1, [Score=57.4, Expect=3e-09]} {RNA1509_19821, RNA1509_58987} {RNA1310_35993, RNA1509_58987} {RNA1509_58987, RNA815_16196.1} |
| 8. | MligTC455_34111 | 183 | 3.81 | Mlig455_013788, Mlig455_013920 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 3.041/0.00076 |
TRPA1 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_013788 {REF} {Length: 4648} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=198.0]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeat [PF00023.32, score=144.1]; Ankyrin repeats (many copies) [PF13857.8, score=143.7]; Ankyrin repeat [PF13606.8, score=139.8]; Ion transport protein [PF00520.33, score=19.2]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=157, Expect=2e-38]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=176, Expect=2e-44]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=124, Expect=3e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=133, Expect=4e-31]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=235, Expect=6e-64]} {RNA1509_8073} {RNA1310_3083.1} {RNA815_994.1} Mlig455_013920 {REF} {Length: 4556} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=199.9]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeats (many copies) [PF13857.8, score=143.3]; Ankyrin repeat [PF00023.32, score=143.2]; Ankyrin repeat [PF13606.8, score=138.4]; Ion transport protein [PF00520.33, score=19.9]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=194, Expect=7e-50]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=195, Expect=3e-50]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=204, Expect=3e-53]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=149, Expect=3e-36]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=288, Expect=3e-81]} {RNA1509_8073} {RNA1310_2090.2, RNA1509_8073} {RNA1509_8073, RNA815_994.1} |
| 9. | MligTC455_48028 | 185 | 3.85 | Mlig455_007274 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 4.108 Regeneration-enriched BL: 4.108 |
SPSB4 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_007274 {REF} {Length: 2130} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=104, Expect=7e-27]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=4e-27]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=2e-27]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=103, Expect=1e-26]} {Dmel: FBgn0026238, gus, gustavus, [Score=107, Expect=5e-28]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [Score=94.7, Expect=5e-23]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=77.0, Expect=8e-17]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105} |
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