Data search
Results for MligTC455_39474
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39474 | 5902 | 122.95 | Mlig455_011545 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.320 Regeneration-downregulated BL: -1.002 Regeneration-depleted BL: -1.002 |
RAC2 | Mlig455_011545 {REF} {Length: 1556} {Pfam: Ras family [PF00071.24, score=187.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.6]; ADP-ribosylation factor family [PF00025.23, score=32.1]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [RH, Score=354, Expect=4e-126]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [RH, Score=355, Expect=1e-126]} {Dmel: FBgn0010333, Rac1, [RH, Score=348, Expect=6e-124]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=334, Expect=9e-119]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [RH, Score=322, Expect=4e-114]} {RNA1509_763} {RNA1310_24564.1} {RNA815_10046} |
Cumulative graph for MligTC455_39474
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.041 | 6.958 | 0.01495 | 0.34426 | |
| RegionR2 | -0.182 | 6.958 | 0.47622 | 0.86140 | |
| RegionR3 | 0.422 | 6.958 | 0.04385 | 0.36542 | |
| RegionR4 | 0.347 | 6.958 | 0.16003 | 0.41712 | |
| RegionR5 | -0.145 | 6.958 | 0.49588 | 0.85929 | |
| RegionR6 | 0.22 | 6.958 | 0.30917 | 0.89945 | |
| RegionR7 | -0.145 | 6.958 | 0.54611 | 1.00000 | |
| RegionR8 | 0.523 | 6.958 | 0.03632 | 0.37350 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.415 | 6.958 | 0.45041 | 1.00000 | |
| RegenerationR2 | -0.061 | 6.958 | 0.81617 | 0.99442 | |
| RegenerationR3 | -0.545 | 6.958 | 0.04660 | 0.37631 | |
| RegenerationR4 | -0.249 | 6.958 | 0.36784 | 0.79218 | |
| RegenerationR5 | 0.044 | 6.958 | 0.87069 | 1.00000 | |
| RegenerationR6 | -0.331 | 6.958 | 0.22875 | 0.57437 | |
| RegenerationBL | -1.002 | 6.958 | 0.00026 | 0.00891 | Specific for BL: -1.002 |
| RegenerationTP | -0.242 | 6.958 | 0.38024 | 0.81562 |
Genes with expression patterns similar to MligTC455_39474
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39474 | 5902 | 122.95 | Mlig455_011545 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.320 Regeneration-downregulated BL: -1.002 Regeneration-depleted BL: -1.002 |
RAC2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011545 {REF} {Length: 1556} {Pfam: Ras family [PF00071.24, score=187.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.6]; ADP-ribosylation factor family [PF00025.23, score=32.1]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [RH, Score=354, Expect=4e-126]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [RH, Score=355, Expect=1e-126]} {Dmel: FBgn0010333, Rac1, [RH, Score=348, Expect=6e-124]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=334, Expect=9e-119]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [RH, Score=322, Expect=4e-114]} {RNA1509_763} {RNA1310_24564.1} {RNA815_10046} |
| 2. | MligTC455_39473 | 5925 | 123.45 | Mlig455_011460 | Neo: - Age: Down-Up-Up |
RAC2 | 5.988 | 0.993 | 0.999 | 1.000 | 1.000 | 0.998 | 0.998 | Mlig455_011460 {REF} {Length: 1920} {Pfam: Ras family [PF00071.24, score=187.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.6]; ADP-ribosylation factor family [PF00025.23, score=32.1]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [RH, Score=354, Expect=4e-126]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [RH, Score=355, Expect=1e-126]} {Dmel: FBgn0010333, Rac1, [RH, Score=348, Expect=6e-124]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=334, Expect=9e-119]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [RH, Score=322, Expect=4e-114]} {RNA1509_13909, RNA1509_21177, RNA1509_34146, RNA1509_36189, RNA1509_763} {RNA1310_24564.1, RNA1509_13909, RNA1509_21177, RNA1509_34146, RNA1509_36189, RNA1509_763} {RNA1509_13909, RNA1509_21177, RNA1509_34146, RNA1509_36189, RNA1509_763, RNA815_10046} |
| 3. | MligTC455_00832 | 699 | 14.56 | Mlig455_006115, Mlig455_049816 | Neo: - Age: Down-Up-Up Region-enriched R4: 2.548/0.02058 |
LRIG3 | 1.741 | - | - | - | 0.791 | - | 0.950 | Mlig455_006115 {REF} {Length: 231} {NoTransDecoderORF} {RNA1509_37269} Mlig455_049816 {REF} {Length: 3502} {Pfam: Leucine rich repeat [PF13855.8, score=73.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.6]} {Human: ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [Score=61.2, Expect=5e-09]} {Mouse: ENSMUSG00000020140, Lgr5, leucine rich repeat containing G protein coupled receptor 5, [Score=58.5, Expect=3e-08]} {Dmel: FBgn0028872, CG18095, [Score=59.3, Expect=1e-08]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [Score=53.9, Expect=5e-07]} {RNA1509_8817} {RNA1310_2409} {RNA815_590.1} |
| 4. | MligTC455_53559 | 778 | 16.2 | Mlig455_044943 | Neo: - Age: logFC(26M/2M)=-0.282 Region-enriched R4: 1.449/0.01452 |
ARHGEF16 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_044943 {REF} {Length: 4573} {Pfam: RhoGEF domain [PF00621.22, score=104.2]; SH3 domain [PF00018.30, score=30.4]; Variant SH3 domain [PF07653.19, score=27.2]; Variant SH3 domain [PF14604.8, score=25.1]} {Human: ENSG00000130762, ARHGEF16, Rho guanine nucleotide exchange factor 16, [RH, Score=236, Expect=4e-67]; ENSG00000066248, NGEF, neuronal guanine nucleotide exchange factor, [RH, Score=229, Expect=2e-65]; ENSG00000277101, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=227, Expect=5e-63]; ENSG00000114790, ARHGEF26, Rho guanine nucleotide exchange factor 26, [RH, Score=227, Expect=5e-63]} {Mouse: ENSMUSG00000026259, Ngef, neuronal guanine nucleotide exchange factor, [RH, Score=233, Expect=3e-66]; ENSMUSG00000036885, Arhgef26, Rho guanine nucleotide exchange factor (GEF) 26, [RH, Score=223, Expect=8e-62]} {Dmel: FBgn0261547, Exn, Ephexin, [Score=193, Expect=3e-51]} {Celegans: WBGene00019487, ephx-1, EPHeXin (Eph-interacting GEF) homolog, [RH, Score=247, Expect=2e-69]} {Smed: dd_Smed_v6_12864_0_1, dd_Smed_v6_12864_0_1, [Score=170, Expect=3e-44]} {RNA1509_29536, RNA1509_39142, RNA1509_56108} {RNA1310_6037.2, RNA1509_39142, RNA1509_56108} {RNA1509_39142, RNA1509_56108, RNA815_3320.1} |
| 5. | MligTC455_47441 | 543 | 11.32 | Mlig455_045866 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_045866 {REF} {Length: 2993} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=173, Expect=4e-47]} {RNA1509_34658, RNA1509_4754} {RNA1310_5693.1, RNA1509_34658, RNA1509_4754} {RNA1509_34658, RNA1509_4754, RNA815_2001} |
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