TomoSeq data search

Data search

Results for MligTC455_39484

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39484

430

8.96

Mlig455_032696, Mlig455_032708

Neo: -

Age: -

TRNT1

Mlig455_032696 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: Poly A polymerase head domain [PF01743.22, score=109.2]; Probable RNA and SrmB- binding site of polymerase A [PF12627.9, score=29.9]} {Human: ENSG00000072756, TRNT1, tRNA nucleotidyl transferase 1, [RH, Score=356, Expect=2e-118]} {Mouse: ENSMUSG00000013736, Trnt1, tRNA nucleotidyl transferase, CCA-adding, 1, [RH, Score=364, Expect=6e-122]} {Dmel: FBgn0037369, CG2100, [RH, Score=333, Expect=2e-109]} {Celegans: WBGene00010089, hpo-31, [RH, Score=331, Expect=5e-109]} {Smed: dd_Smed_v6_10183_0_1, dd_Smed_v6_10183_0_1, [RH, Score=354, Expect=6e-118]} {RNA1509_21242, RNA1509_49999} {RNA1310_18073, RNA1509_21242, RNA1509_49999} {RNA1509_21242, RNA1509_49999, RNA815_7144}

Mlig455_032708 {REF} {Length: 3766} {TRANSSPLICED} {Pfam: Poly A polymerase head domain [PF01743.22, score=109.3]; Probable RNA and SrmB- binding site of polymerase A [PF12627.9, score=30.0]} {Human: ENSG00000072756, TRNT1, tRNA nucleotidyl transferase 1, [RH, Score=357, Expect=7e-119]} {Mouse: ENSMUSG00000013736, Trnt1, tRNA nucleotidyl transferase, CCA-adding, 1, [RH, Score=365, Expect=2e-122]} {Dmel: FBgn0037369, CG2100, [RH, Score=334, Expect=1e-109]} {Celegans: WBGene00010089, hpo-31, [RH, Score=331, Expect=3e-109]} {Smed: dd_Smed_v6_10183_0_1, dd_Smed_v6_10183_0_1, [RH, Score=353, Expect=1e-117]} {RNA1509_21242} {RNA1310_18073} {RNA815_7144}

Cumulative graph for MligTC455_39484

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.774	3.614	0.31393	0.96317
RegionR2	0.678	3.614	0.42537	0.81582
RegionR3	1.263	3.614	0.11011	0.57752
RegionR4	-0.84	3.614	0.35453	0.67675
RegionR5	0.308	3.614	0.62626	0.98020
RegionR6	0.044	3.614	0.95176	1.00000
RegionR7	0.444	3.614	0.55346	1.00000
RegionR8	-0.123	3.614	0.89766	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.277	3.614	0.35960	1.00000
RegenerationR2	-0.074	3.614	0.92791	1.00000
RegenerationR3	-0.705	3.614	0.41790	0.81362
RegenerationR4	0.563	3.614	0.53838	0.88785
RegenerationR5	0.081	3.614	0.91311	1.00000
RegenerationR6	0.639	3.614	0.44802	0.76892
RegenerationBL	1.332	3.614	0.10738	0.38688
RegenerationTP	-0.128	3.614	0.89955	1.00000

Genes with expression patterns similar to MligTC455_39484

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39484	430	8.96	Mlig455_032696, Mlig455_032708	Neo: - Age: -	TRNT1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032696 {REF} {Length: 4206} {TRANSSPLICED} {Pfam: Poly A polymerase head domain [PF01743.22, score=109.2]; Probable RNA and SrmB- binding site of polymerase A [PF12627.9, score=29.9]} {Human: ENSG00000072756, TRNT1, tRNA nucleotidyl transferase 1, [RH, Score=356, Expect=2e-118]} {Mouse: ENSMUSG00000013736, Trnt1, tRNA nucleotidyl transferase, CCA-adding, 1, [RH, Score=364, Expect=6e-122]} {Dmel: FBgn0037369, CG2100, [RH, Score=333, Expect=2e-109]} {Celegans: WBGene00010089, hpo-31, [RH, Score=331, Expect=5e-109]} {Smed: dd_Smed_v6_10183_0_1, dd_Smed_v6_10183_0_1, [RH, Score=354, Expect=6e-118]} {RNA1509_21242, RNA1509_49999} {RNA1310_18073, RNA1509_21242, RNA1509_49999} {RNA1509_21242, RNA1509_49999, RNA815_7144} Mlig455_032708 {REF} {Length: 3766} {TRANSSPLICED} {Pfam: Poly A polymerase head domain [PF01743.22, score=109.3]; Probable RNA and SrmB- binding site of polymerase A [PF12627.9, score=30.0]} {Human: ENSG00000072756, TRNT1, tRNA nucleotidyl transferase 1, [RH, Score=357, Expect=7e-119]} {Mouse: ENSMUSG00000013736, Trnt1, tRNA nucleotidyl transferase, CCA-adding, 1, [RH, Score=365, Expect=2e-122]} {Dmel: FBgn0037369, CG2100, [RH, Score=334, Expect=1e-109]} {Celegans: WBGene00010089, hpo-31, [RH, Score=331, Expect=3e-109]} {Smed: dd_Smed_v6_10183_0_1, dd_Smed_v6_10183_0_1, [RH, Score=353, Expect=1e-117]} {RNA1509_21242} {RNA1310_18073} {RNA815_7144}
2.	MligTC455_00419	109	2.27	Mlig455_003934	Neo: - Age: -		1.789	-	-	-	0.976	-	0.813	Mlig455_003934 {REF} {Length: 780} {NoTransDecoderORF} {RNA1509_46406} {RNA1310_72097} {RNA815_61152.1}
3.	MligTC455_38505	289	6.03	Mlig455_006520	Neo: Int S/G2/M Age: Up-Down-Down Region-specific R4: 2.408	HASPIN	1.703	-	-	-	0.723	-	0.980	Mlig455_006520 {REF} {Length: 3897} {TRANSSPLICED} {Pfam: Haspin like kinase domain [PF12330.10, score=184.3]; Protein kinase domain [PF00069.27, score=19.3]} {Human: ENSG00000177602, HASPIN, histone H3 associated protein kinase, [Score=217, Expect=8e-60]} {Mouse: ENSMUSG00000050107, Haspin, histone H3 associated protein kinase, [Score=223, Expect=2e-62]} {Dmel: FBgn0046706, Haspin, [RH, Score=228, Expect=8e-66]} {Celegans: WBGene00007258, hasp-1, HASPin kinase related, [Score=189, Expect=5e-50]} {Smed: dd_Smed_v6_12380_0_1, dd_Smed_v6_12380_0_1, [Score=268, Expect=6e-80]} {RNA1509_15378, RNA1509_40648} {RNA1310_5814.1, RNA1509_15378, RNA1509_40648} {RNA1509_15378, RNA1509_40648, RNA815_8825}
4.	MligTC455_25897	384	8	Mlig455_052769	Neo: - Age: -		1.66	-	-	0.952	-	-	0.708	Mlig455_052769 {REF} {Length: 2908} {RNA1509_13515, RNA1509_27869, RNA1509_45064, RNA1509_56421, RNA1509_59447, RNA1509_9636} {RNA1310_7271.1, RNA1509_13515, RNA1509_27869, RNA1509_45064, RNA1509_56421, RNA1509_59447, RNA1509_9636} {RNA1509_13515, RNA1509_27869, RNA1509_45064, RNA1509_56421, RNA1509_59447, RNA1509_9636, RNA815_6318}
5.	MligTC455_19219	189	3.93	Mlig455_060400	Neo: - Age: logFC(26M/2M)=0.407		0.975	-	-	-	0.975	-	-	Mlig455_060400 {REF} {Length: 2170} {Pfam: EF-hand domain pair [PF13499.8, score=79.6]; EF-hand domain [PF13405.8, score=63.7]; EF-hand domain pair [PF13833.8, score=62.4]; EF hand [PF00036.34, score=57.3]; EF hand [PF13202.8, score=40.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.2]} {Dmel: FBgn0026144, CBP, sarcoplasmic calcium-binding protein, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [RH, Score=412, Expect=2e-143]} {RNA1509_14509} {RNA1310_13479, RNA1509_14509} {RNA1509_14509, RNA815_4591.1}
6.	MligTC455_44692	664	13.83	Mlig455_026776	Neo: - Age: logFC(26M/2M)=0.515	SUPT16H	0.97	-	-	-	0.970	-	-	Mlig455_026776 {REF} {Length: 3807} {Pfam: FACT complex subunit (SPT16/CDC68) [PF08644.13, score=153.8]; FACT complex subunit SPT16 N-terminal lobe domain [PF14826.8, score=137.2]; Metallopeptidase family M24 [PF00557.26, score=90.5]; Histone chaperone Rttp106-like [PF08512.14, score=62.0]} {Human: ENSG00000092201, SUPT16H, SPT16 homolog, facilitates chromatin remodeling subunit, [RH, Score=929, Expect=0.0]} {Mouse: ENSMUSG00000035726, Supt16, suppressor of Ty 16, [RH, Score=928, Expect=0.0]} {Dmel: FBgn0002183, dre4, [RH, Score=929, Expect=0.0]} {Celegans: WBGene00018849, spt-16, FACT complex subunit spt-16, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_2595_0_1, dd_Smed_v6_2595_0_1, [RH, Score=741, Expect=0.0]} {RNA1509_1574} {RNA1310_2977.1, RNA1509_1574} {RNA1509_1574, RNA815_862}
7.	MligTC455_49684	171	3.57	Mlig455_007251	Neo: - Age: -	ECPAS	0.968	-	-	-	-	-	0.968	Mlig455_007251 {REF} {Length: 6635} {Pfam: Proteasome stabiliser [PF13001.9, score=353.4]; HEAT-like repeat [PF13513.8, score=31.1]; HEAT repeat [PF02985.24, score=20.8]} {Human: ENSG00000136813, ECPAS, Ecm29 proteasome adaptor and scaffold, [RH, Score=630, Expect=0.0]} {Mouse: ENSMUSG00000050812, Ecpas, Ecm29 proteasome adaptor and scaffold, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0033698, CG8858, [RH, Score=318, Expect=3e-87]} {Celegans: WBGene00008422, D2045.2, [RH, Score=157, Expect=5e-38]} {Smed: dd_Smed_v6_5379_0_1, dd_Smed_v6_5379_0_1, [RH, Score=622, Expect=0.0]} {RNA1509_3523} {RNA1310_362.1, RNA1509_3523} {RNA1509_3523, RNA815_2978}
8.	MligTC455_43091	159	3.31	Mlig455_012706	Neo: - Age: -	SPAST	0.964	-	-	-	0.964	-	-	Mlig455_012706 {REF} {Length: 3310} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=127.2]; AAA+ lid domain [PF17862.3, score=38.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.4]; AAA domain [PF13401.8, score=21.8]; TIP49 P-loop domain [PF06068.15, score=20.7]; IstB-like ATP binding protein [PF01695.19, score=20.2]; Bacterial TniB protein [PF05621.13, score=18.6]} {Human: ENSG00000021574, SPAST, spastin, [RH, Score=343, Expect=4e-113]} {Mouse: ENSMUSG00000024068, Spast, spastin, [RH, Score=339, Expect=2e-110]} {Dmel: FBgn0039141, spas, spastin, [RH, Score=327, Expect=8e-105]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [RH, Score=306, Expect=2e-99]} {Smed: dd_Smed_v6_7472_0_1, dd_Smed_v6_7472_0_1, [RH, Score=323, Expect=3e-105]} {RNA1509_31393, RNA1509_60086} {RNA1310_17702, RNA1509_31393, RNA1509_60086} {RNA1509_31393, RNA1509_60086, RNA815_24923}
9.	MligTC455_37281	154	3.2	Mlig455_035877	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_035877 {REF} {Length: 4154} {Pfam: PDZ domain [PF00595.26, score=43.5]; PDZ domain [PF17820.3, score=41.3]; PDZ domain [PF13180.8, score=26.9]} {RNA1509_44785} {RNA1310_3900.1, RNA1509_44785} {RNA1509_44785, RNA815_7132}
10.	MligTC455_30629	803	16.73	Mlig455_066612	Neo: - Age: - Region-enriched R5: 1.551/0.02318	GALK1	0.96	-	-	-	-	-	0.960	Mlig455_066612 {REF} {Length: 1768} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=75.3]; GHMP kinases C terminal [PF08544.15, score=50.8]; GHMP kinases N terminal domain [PF00288.28, score=47.2]} {Human: ENSG00000108479, GALK1, galactokinase 1, [RH, Score=367, Expect=1e-124]} {Mouse: ENSMUSG00000020766, Galk1, galactokinase 1, [RH, Score=365, Expect=4e-124]} {Dmel: FBgn0263199, Galk, Galactokinase, [Score=81.6, Expect=2e-16]} {Celegans: WBGene00006461, tag-96, [Score=101, Expect=3e-23]} {Smed: dd_Smed_v6_5394_0_1, dd_Smed_v6_5394_0_1, [RH, Score=335, Expect=1e-112]} {RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1310_15048, RNA1509_16527, RNA1509_24089, RNA1509_48275} {RNA1509_16527, RNA1509_24089, RNA1509_48275, RNA815_9890}
11.	MligTC455_33917	79	1.65	Mlig455_016784	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.075		0.96	-	-	-	-	-	0.960	Mlig455_016784 {REF} {Length: 5047} {RNA1509_11266} {RNA1310_103034} {RNA815_22649.3}
12.	MligTC455_20864	359	7.49	Mlig455_014815	Neo: - Age: - Region-enriched R4: 3.052/0.00599 Region-enriched R5: 2.028/0.03479	CASP3	0.956	-	-	-	-	-	0.956	Mlig455_014815 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=132.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=213, Expect=3e-67]; ENSG00000165806, CASP7, caspase 7, [Score=211, Expect=2e-66]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=209, Expect=8e-66]; ENSMUSG00000031628, Casp3, caspase 3, [Score=201, Expect=6e-63]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=185, Expect=4e-56]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=130, Expect=6e-36]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=164, Expect=2e-49]} {RNA1509_27339, RNA1509_8672} {RNA1310_32950.1, RNA1509_27339} {RNA1509_27339, RNA815_12370.1}
13.	MligTC455_31727	319	6.64	Mlig455_052802	Neo: - Age: - Region-enriched R2: 1.942/0.03690	BBS7	0.952	-	-	-	-	-	0.952	Mlig455_052802 {REF} {Length: 3681} {TRANSSPLICED} {Pfam: Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=24.7]; FG-GAP-like repeat [PF13517.8, score=19.2]} {Human: ENSG00000138686, BBS7, Bardet-Biedl syndrome 7, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000037325, Bbs7, Bardet-Biedl syndrome 7 (human), [RH, Score=730, Expect=0.0]} {Celegans: WBGene00003892, osm-12, Bardet-Biedl syndrome 7 protein homolog, [RH, Score=395, Expect=1e-127]} {Smed: dd_Smed_v6_15015_0_1, dd_Smed_v6_15015_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_7138} {RNA1310_7894, RNA1509_7138} {RNA1509_7138, RNA815_2924}
14.	MligTC455_16434	180	3.75	Mlig455_065893	Neo: Neoblast Age: - Region-enriched R4: 4.682/0.00000		0.95	-	-	-	0.950	-	-	Mlig455_065893 {REF} {Length: 1149} {RNA1310_54637} {RNA815_34864}
15.	MligTC455_37017	345	7.2	Mlig455_035238	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418}

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