Data search
Results for MligTC455_39574
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39574 | 211 | 4.40 | Mlig455_067662 | Neo: - Age: - |
KCNC1 | Mlig455_067662 {REF} {Length: 2883} {Pfam: Ion transport protein [PF00520.33, score=105.3]; BTB/POZ domain [PF02214.24, score=64.2]; Ion channel [PF07885.18, score=54.8]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=223, Expect=6e-63]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=220, Expect=1e-61]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=222, Expect=5e-63]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=4e-61]; ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=213, Expect=7e-58]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=213, Expect=1e-59]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=202, Expect=2e-56]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=213, Expect=9e-60]} {RNA1509_26535} {RNA1310_7069} {RNA815_23635} |
Cumulative graph for MligTC455_39574
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.05 | 2.781 | 0.97863 | 1.00000 | |
| RegionR2 | 0.697 | 2.781 | 0.38578 | 0.78052 | |
| RegionR3 | 0.655 | 2.781 | 0.26455 | 0.80946 | |
| RegionR4 | -1.244 | 2.781 | 0.12234 | 0.35113 | |
| RegionR5 | -0.73 | 2.781 | 0.21274 | 0.51017 | |
| RegionR6 | -0.498 | 2.781 | 0.47064 | 1.00000 | |
| RegionR7 | -0.206 | 2.781 | 0.82854 | 1.00000 | |
| RegionR8 | 1.276 | 2.781 | 0.18222 | 0.76787 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.324 | 2.781 | 0.34519 | 1.00000 | |
| RegenerationR2 | 0.099 | 2.781 | 0.87892 | 1.00000 | |
| RegenerationR3 | 0.141 | 2.781 | 0.84461 | 0.99620 | |
| RegenerationR4 | 1.542 | 2.781 | 0.05041 | 0.36134 | |
| RegenerationR5 | 0.835 | 2.781 | 0.23414 | 0.66807 | |
| RegenerationR6 | 0.473 | 2.781 | 0.54708 | 0.83733 | |
| RegenerationBL | 0.61 | 2.781 | 0.50919 | 0.87286 | |
| RegenerationTP | -0.061 | 2.781 | 0.94980 | 1.00000 |
Genes with expression patterns similar to MligTC455_39574
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39574 | 211 | 4.4 | Mlig455_067662 | Neo: - Age: - |
KCNC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067662 {REF} {Length: 2883} {Pfam: Ion transport protein [PF00520.33, score=105.3]; BTB/POZ domain [PF02214.24, score=64.2]; Ion channel [PF07885.18, score=54.8]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=223, Expect=6e-63]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=220, Expect=1e-61]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=222, Expect=5e-63]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=4e-61]; ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=213, Expect=7e-58]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=213, Expect=1e-59]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=202, Expect=2e-56]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=213, Expect=9e-60]} {RNA1509_26535} {RNA1310_7069} {RNA815_23635} |
| 2. | MligTC455_15013 | 158 | 3.3 | Mlig455_003246, Mlig455_058049 | Neo: - Age: - |
1.734 | - | - | 0.958 | 0.776 | - | - | Mlig455_003246 {REF} {Length: 162} {NoTransDecoderORF} {RNA1509_22785} {RNA1310_21131} {RNA815_10463} Mlig455_058049 {REF} {Length: 1028} {RNA1509_22785} {RNA1310_21131} {RNA815_10463} |
|
| 3. | MligTC455_26116 | 131 | 2.73 | Mlig455_009678 | Neo: - Age: Up-Down-Down |
0.969 | - | - | - | - | - | 0.969 | Mlig455_009678 {REF} {Length: 1706} {RNA1509_28486} {RNA1310_24343.1} {RNA815_8096} | |
| 4. | MligTC455_26354 | 24 | 0.5 | Mlig455_068773 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_068773 {REF} {Length: 161} {NoTransDecoderORF} {RNA1310_63674} {RNA815_25651.4} | |
| 5. | MligTC455_38758 | 111 | 2.32 | Mlig455_005028 | Neo: - Age: - |
SARDH | 0.954 | - | - | - | - | - | 0.954 | Mlig455_005028 {REF} {Length: 4014} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=200.2]; FAD dependent oxidoreductase [PF01266.26, score=161.0]; FAD dependent oxidoreductase central domain [PF16350.7, score=68.2]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=34.5]} {Human: ENSG00000123453, SARDH, sarcosine dehydrogenase, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000009614, Sardh, sarcosine dehydrogenase, [RH, Score=951, Expect=0.0]} {Dmel: FBgn0034276, Sardh, Sarcosine dehydrogenase, [RH, Score=748, Expect=0.0]} {Celegans: WBGene00013718, pdpr-1, Pyruvate Dehydrogenase Phosphatase Regulatory subunit, [RH, Score=266, Expect=9e-77]} {Smed: dd_Smed_v6_4280_0_1, dd_Smed_v6_4280_0_1, [RH, Score=922, Expect=0.0]} {RNA1509_17513} {RNA1310_2390.1} {RNA815_1743} |
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