TomoSeq data search

Data search

Results for MligTC455_39653

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39653	30	0.62	Mlig455_027420	Neo: - Age: Up-Down-Down Regeneration-enriched R3: 7.684 Regeneration-enriched R4: 7.677 Regeneration-enriched R5: 6.263	UBR4	Mlig455_027420 {REF} {Length: 3513} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=856.3]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=785, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=813, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [Score=708, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=317, Expect=1e-90]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=366, Expect=4e-107]} {RNA1509_26739} {RNA1310_49.1} {RNA815_537.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39653

0.62

Mlig455_027420

Neo: -

Age: Up-Down-Down

Regeneration-enriched R3: 7.684
Regeneration-enriched R4: 7.677
Regeneration-enriched R5: 6.263

UBR4

Mlig455_027420 {REF} {Length: 3513} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=856.3]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=785, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=813, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [Score=708, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=317, Expect=1e-90]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=366, Expect=4e-107]} {RNA1509_26739} {RNA1310_49.1} {RNA815_537.1}

Cumulative graph for MligTC455_39653

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.217	0.931	0.99977	1.00000
RegionR2	5.947	0.931	0.99985	1.00000
RegionR3	1.143	0.931	0.99995	1.00000
RegionR4	-4.947	0.931	0.99980	1.00000
RegionR5	-0.716	0.931	0.99989	1.00000
RegionR6	1.147	0.931	0.99998	1.00000
RegionR7	1.511	0.931	0.99996	1.00000
RegionR8	2.13	0.931	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.695	0.931	0.99994	1.00000
RegenerationR2	3.094	0.931	0.01652	0.21092
RegenerationR3	7.684	0.931	0.00005	0.00735
RegenerationR4	7.677	0.931	0.00003	0.00273
RegenerationR5	6.263	0.931	0.00005	0.00850
RegenerationR6	6.863	0.931	0.00018	0.01235
RegenerationBL	1.681	0.931	0.99990	1.00000
RegenerationTP	5.675	0.931	0.01078	0.17620

Genes with expression patterns similar to MligTC455_39653

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39653	30	0.62	Mlig455_027420	Neo: - Age: Up-Down-Down Regeneration-enriched R3: 7.684 Regeneration-enriched R4: 7.677 Regeneration-enriched R5: 6.263	UBR4	2	-	-	-	-	1.000	1.000	Mlig455_027420 {REF} {Length: 3513} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=856.3]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=785, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=813, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [Score=708, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=317, Expect=1e-90]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=366, Expect=4e-107]} {RNA1509_26739} {RNA1310_49.1} {RNA815_537.1}
2.	MligTC455_18270	68	1.42	Mlig455_002895, Mlig455_002898	Neo: - Age: - Region-enriched R2: 5.462/0.00338	CDK5R1, CDK5R2	0.953	-	-	-	-	-	0.953	Mlig455_002895 {REF} {Length: 2279} {Pfam: Cyclin-dependent kinase 5 activator protein [PF03261.17, score=254.4]} {Human: ENSG00000171450, CDK5R2, cyclin dependent kinase 5 regulatory subunit 2, [RH, Score=173, Expect=8e-51]} {Mouse: ENSMUSG00000090071, Cdk5r2, cyclin-dependent kinase 5, regulatory subunit 2 (p39), [RH, Score=173, Expect=6e-51]} {Dmel: FBgn0027491, Cdk5alpha, Cdk5 activator-like protein, [RH, Score=193, Expect=2e-57]} {Celegans: WBGene00011955, cdka-1, Cyclin-dependent kinase 5 activator 1, [Score=170, Expect=7e-50]} {Smed: dd_Smed_v6_13788_0_1, dd_Smed_v6_13788_0_1, [Score=202, Expect=6e-63]} {RNA1310_36625} {RNA815_39057} Mlig455_002898 {REF} {Length: 2204} {Pfam: Cyclin-dependent kinase 5 activator protein [PF03261.17, score=252.9]} {Human: ENSG00000176749, CDK5R1, cyclin dependent kinase 5 regulatory subunit 1, [Score=176, Expect=2e-52]; ENSG00000171450, CDK5R2, cyclin dependent kinase 5 regulatory subunit 2, [Score=172, Expect=3e-50]} {Mouse: ENSMUSG00000090071, Cdk5r2, cyclin-dependent kinase 5, regulatory subunit 2 (p39), [RH, Score=172, Expect=2e-50]} {Dmel: FBgn0027491, Cdk5alpha, Cdk5 activator-like protein, [RH, Score=193, Expect=2e-57]} {Celegans: WBGene00011955, cdka-1, Cyclin-dependent kinase 5 activator 1, [Score=169, Expect=1e-49]} {Smed: dd_Smed_v6_13788_0_1, dd_Smed_v6_13788_0_1, [Score=196, Expect=1e-60]} {RNA1310_36625} {RNA815_39057}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39653

0.62

Mlig455_027420

Neo: -

Age: Up-Down-Down

Regeneration-enriched R3: 7.684
Regeneration-enriched R4: 7.677
Regeneration-enriched R5: 6.263

UBR4

1.000

MligTC455_18270

1.42

Mlig455_002895, Mlig455_002898

Neo: -

Age: -

Region-enriched R2: 5.462/0.00338

CDK5R1, CDK5R2

0.953

Mlig455_002895 {REF} {Length: 2279} {Pfam: Cyclin-dependent kinase 5 activator protein [PF03261.17, score=254.4]} {Human: ENSG00000171450, CDK5R2, cyclin dependent kinase 5 regulatory subunit 2, [RH, Score=173, Expect=8e-51]} {Mouse: ENSMUSG00000090071, Cdk5r2, cyclin-dependent kinase 5, regulatory subunit 2 (p39), [RH, Score=173, Expect=6e-51]} {Dmel: FBgn0027491, Cdk5alpha, Cdk5 activator-like protein, [RH, Score=193, Expect=2e-57]} {Celegans: WBGene00011955, cdka-1, Cyclin-dependent kinase 5 activator 1, [Score=170, Expect=7e-50]} {Smed: dd_Smed_v6_13788_0_1, dd_Smed_v6_13788_0_1, [Score=202, Expect=6e-63]} {RNA1310_36625} {RNA815_39057}

Mlig455_002898 {REF} {Length: 2204} {Pfam: Cyclin-dependent kinase 5 activator protein [PF03261.17, score=252.9]} {Human: ENSG00000176749, CDK5R1, cyclin dependent kinase 5 regulatory subunit 1, [Score=176, Expect=2e-52]; ENSG00000171450, CDK5R2, cyclin dependent kinase 5 regulatory subunit 2, [Score=172, Expect=3e-50]} {Mouse: ENSMUSG00000090071, Cdk5r2, cyclin-dependent kinase 5, regulatory subunit 2 (p39), [RH, Score=172, Expect=2e-50]} {Dmel: FBgn0027491, Cdk5alpha, Cdk5 activator-like protein, [RH, Score=193, Expect=2e-57]} {Celegans: WBGene00011955, cdka-1, Cyclin-dependent kinase 5 activator 1, [Score=169, Expect=1e-49]} {Smed: dd_Smed_v6_13788_0_1, dd_Smed_v6_13788_0_1, [Score=196, Expect=1e-60]} {RNA1310_36625} {RNA815_39057}