Data search


search
Exact
Search

Results for MligTC455_39700

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39700 543 11.31 Mlig455_064553

Neo: -

Age: logFC(26M/2M)=0.468

RBKS Mlig455_064553 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=218.9]; Phosphomethylpyrimidine kinase [PF08543.14, score=36.8]; Immunity protein Imm1 [PF14430.8, score=19.8]} {Human: ENSG00000171174, RBKS, ribokinase, [RH, Score=227, Expect=4e-72]} {Mouse: ENSMUSG00000029136, Rbks, ribokinase, [RH, Score=231, Expect=7e-74]} {Dmel: FBgn0025640, CG13369, [RH, Score=219, Expect=9e-70]} {Celegans: WBGene00008548, F07A11.5, Ribokinase, [RH, Score=208, Expect=2e-65]} {Smed: dd_Smed_v6_6554_0_1, dd_Smed_v6_6554_0_1, [RH, Score=265, Expect=1e-87]} {RNA1509_17638} {RNA1310_25506.1} {RNA815_10603}

Cumulative graph for MligTC455_39700

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.285 3.884 0.87345 1.00000
RegionR2 0.04 3.884 0.96000 1.00000
RegionR3 1.146 3.884 0.14146 0.64213
RegionR4 0.934 3.884 0.32362 0.64111
RegionR5 0.794 3.884 0.29958 0.63480
RegionR6 0.116 3.884 0.88330 1.00000
RegionR7 -0.903 3.884 0.42179 1.00000
RegionR8 -2.412 3.884 0.16122 0.72639

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.201 3.884 0.92584 1.00000
RegenerationR2 -0.657 3.884 0.49063 0.86775
RegenerationR3 0.669 3.884 0.47519 0.84702
RegenerationR4 0.592 3.884 0.53741 0.88734
RegenerationR5 0.372 3.884 0.68328 0.94483
RegenerationR6 0.773 3.884 0.42619 0.75547
RegenerationBL 2.056 3.884 0.05060 0.25894
RegenerationTP 1.97 3.884 0.12023 0.52931


Genes with expression patterns similar to MligTC455_39700

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39700 543 11.31 Mlig455_064553

Neo: -

Age: logFC(26M/2M)=0.468

RBKS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_064553 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=218.9]; Phosphomethylpyrimidine kinase [PF08543.14, score=36.8]; Immunity protein Imm1 [PF14430.8, score=19.8]} {Human: ENSG00000171174, RBKS, ribokinase, [RH, Score=227, Expect=4e-72]} {Mouse: ENSMUSG00000029136, Rbks, ribokinase, [RH, Score=231, Expect=7e-74]} {Dmel: FBgn0025640, CG13369, [RH, Score=219, Expect=9e-70]} {Celegans: WBGene00008548, F07A11.5, Ribokinase, [RH, Score=208, Expect=2e-65]} {Smed: dd_Smed_v6_6554_0_1, dd_Smed_v6_6554_0_1, [RH, Score=265, Expect=1e-87]} {RNA1509_17638} {RNA1310_25506.1} {RNA815_10603}
2. MligTC455_20621 1792 37.33 Mlig455_057870

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.637

NEURL1B 0.962 - - - 0.962 - - Mlig455_057870 {REF} {Length: 3494} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=46.3]; Prokaryotic RING finger family 4 [PF14447.8, score=24.9]; Ring finger domain [PF13639.8, score=19.3]} {Human: ENSG00000214357, NEURL1B, neuralized E3 ubiquitin protein ligase 1B, [RH, Score=70.1, Expect=2e-12]} {Mouse: ENSMUSG00000034413, Neurl1b, neuralized E3 ubiquitin protein ligase 1B, [RH, Score=70.1, Expect=2e-12]} {Celegans: WBGene00007529, C11H1.3, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_9091_0_1, dd_Smed_v6_9091_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_24785} {RNA1310_17020.1} {RNA815_6731}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA