Data search
Results for MligTC455_39753
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39753 | 339 | 7.05 | Mlig455_019308 | Neo: - Age: - Region-enriched R5: 1.541/0.00917 |
ACBD6 | Mlig455_019308 {REF} {Length: 2667} {TRANSSPLICED} {Pfam: Acyl CoA binding protein [PF00887.21, score=72.5]; Ankyrin repeats (3 copies) [PF12796.9, score=38.1]; Ankyrin repeats (many copies) [PF13637.8, score=36.6]; Ankyrin repeat [PF00023.32, score=34.4]; Ankyrin repeat [PF13606.8, score=32.6]; Ankyrin repeats (many copies) [PF13857.8, score=27.0]} {Human: ENSG00000230124, ACBD6, acyl-CoA binding domain containing 6, [Score=99.0, Expect=4e-24]} {Mouse: ENSMUSG00000033701, Acbd6, acyl-Coenzyme A binding domain containing 6, [Score=101, Expect=3e-25]} {Dmel: FBgn0064116, CG33713, [Score=82.4, Expect=1e-18]} {Celegans: WBGene00016655, acbp-1, Acyl-CoA-binding protein homolog 1, [Score=47.8, Expect=2e-07]} {Smed: dd_Smed_v6_8914_0_3, dd_Smed_v6_8914_0_3, [Score=92.8, Expect=1e-22]} {RNA1509_13680} {RNA1310_29226} {RNA815_13811} |
Cumulative graph for MligTC455_39753
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.98 | 3.059 | 0.49013 | 1.00000 | |
| RegionR2 | 0.408 | 3.059 | 0.56464 | 0.92607 | |
| RegionR3 | 0.702 | 3.059 | 0.19138 | 0.72860 | |
| RegionR4 | -0.515 | 3.059 | 0.40300 | 0.72968 | |
| RegionR5 | 1.541 | 3.059 | 0.00088 | 0.00917 | |
| RegionR6 | 0.624 | 3.059 | 0.28467 | 0.87508 | |
| RegionR7 | -0.532 | 3.059 | 0.48264 | 1.00000 | |
| RegionR8 | -1.249 | 3.059 | 0.20322 | 0.80210 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.233 | 3.059 | 0.18491 | 0.92550 | |
| RegenerationR2 | 0.278 | 3.059 | 0.62541 | 0.92499 | |
| RegenerationR3 | 0.48 | 3.059 | 0.44123 | 0.82773 | |
| RegenerationR4 | 0.919 | 3.059 | 0.15877 | 0.59091 | |
| RegenerationR5 | 0.065 | 3.059 | 0.90495 | 1.00000 | |
| RegenerationR6 | 0.457 | 3.059 | 0.47402 | 0.78736 | |
| RegenerationBL | 0.283 | 3.059 | 0.74520 | 1.00000 | |
| RegenerationTP | 1.284 | 3.059 | 0.13772 | 0.55572 |
Genes with expression patterns similar to MligTC455_39753
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39753 | 339 | 7.05 | Mlig455_019308 | Neo: - Age: - Region-enriched R5: 1.541/0.00917 |
ACBD6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019308 {REF} {Length: 2667} {TRANSSPLICED} {Pfam: Acyl CoA binding protein [PF00887.21, score=72.5]; Ankyrin repeats (3 copies) [PF12796.9, score=38.1]; Ankyrin repeats (many copies) [PF13637.8, score=36.6]; Ankyrin repeat [PF00023.32, score=34.4]; Ankyrin repeat [PF13606.8, score=32.6]; Ankyrin repeats (many copies) [PF13857.8, score=27.0]} {Human: ENSG00000230124, ACBD6, acyl-CoA binding domain containing 6, [Score=99.0, Expect=4e-24]} {Mouse: ENSMUSG00000033701, Acbd6, acyl-Coenzyme A binding domain containing 6, [Score=101, Expect=3e-25]} {Dmel: FBgn0064116, CG33713, [Score=82.4, Expect=1e-18]} {Celegans: WBGene00016655, acbp-1, Acyl-CoA-binding protein homolog 1, [Score=47.8, Expect=2e-07]} {Smed: dd_Smed_v6_8914_0_3, dd_Smed_v6_8914_0_3, [Score=92.8, Expect=1e-22]} {RNA1509_13680} {RNA1310_29226} {RNA815_13811} |
| 2. | MligTC455_19732 | 533 | 11.11 | Mlig455_049987 | Neo: Int S/G2/M Age: Down-Up-Down |
SRP14 | 1.786 | - | - | - | 0.832 | - | 0.954 | Mlig455_049987 {REF} {Length: 2512} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830, RNA1509_20740, RNA1509_40118} {RNA1310_47278.1, RNA1509_20740, RNA1509_40118} {RNA1509_20740, RNA1509_40118, RNA815_25613} |
| 3. | MligTC455_53271 | 514 | 10.71 | Mlig455_069029 | Neo: - Age: Down-Up-Up |
SF3B4 | 1.747 | - | - | - | - | 0.951 | 0.796 | Mlig455_069029 {REF} {Length: 1520} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=134.0]; RNA recognition motif [PF16367.7, score=32.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.3]} {Human: ENSG00000143368, SF3B4, splicing factor 3b subunit 4, [RH, Score=400, Expect=3e-138]} {Mouse: ENSMUSG00000068856, Sf3b4, splicing factor 3b, subunit 4, [RH, Score=401, Expect=2e-138]} {Dmel: FBgn0015818, Spx, Spliceosomal protein on the X, [RH, Score=387, Expect=4e-134]} {Celegans: WBGene00004723, sap-49, Splicing factor 3B subunit 4, [RH, Score=371, Expect=1e-127]} {Smed: dd_Smed_v6_3556_0_1, dd_Smed_v6_3556_0_1, [RH, Score=402, Expect=6e-141]} {RNA1509_11168} {RNA1310_45243, RNA1509_11168} {RNA1509_11168, RNA815_14059.2} |
| 4. | MligTC455_34111 | 183 | 3.81 | Mlig455_013788, Mlig455_013920 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 3.041/0.00076 |
TRPA1 | 0.964 | - | 0.964 | - | - | - | - | Mlig455_013788 {REF} {Length: 4648} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=198.0]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeat [PF00023.32, score=144.1]; Ankyrin repeats (many copies) [PF13857.8, score=143.7]; Ankyrin repeat [PF13606.8, score=139.8]; Ion transport protein [PF00520.33, score=19.2]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=157, Expect=2e-38]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=176, Expect=2e-44]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=124, Expect=3e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=133, Expect=4e-31]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=235, Expect=6e-64]} {RNA1509_8073} {RNA1310_3083.1} {RNA815_994.1} Mlig455_013920 {REF} {Length: 4556} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=199.9]; Ankyrin repeats (many copies) [PF13637.8, score=149.2]; Ankyrin repeats (many copies) [PF13857.8, score=143.3]; Ankyrin repeat [PF00023.32, score=143.2]; Ankyrin repeat [PF13606.8, score=138.4]; Ion transport protein [PF00520.33, score=19.9]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=194, Expect=7e-50]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=195, Expect=3e-50]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=204, Expect=3e-53]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=149, Expect=3e-36]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=288, Expect=3e-81]} {RNA1509_8073} {RNA1310_2090.2, RNA1509_8073} {RNA1509_8073, RNA815_994.1} |
| 5. | MligTC455_37520 | 468 | 9.75 | Mlig455_067442 | Neo: - Age: Up-Down-Down |
PAXIP1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_067442 {REF} {Length: 6041} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=112.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=94.4]; twin BRCT domain [PF12738.9, score=79.2]; DNA ligase 3 BRCT domain [PF16759.7, score=34.1]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=29.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=27.0]} {Human: ENSG00000157212, PAXIP1, PAX interacting protein 1, [RH, Score=96.7, Expect=3e-19]} {Mouse: ENSMUSG00000002221, Paxip1, PAX interacting (with transcription-activation domain) protein 1, [Score=94.0, Expect=1e-18]} {Dmel: FBgn0052133, Ptip, PAX transcription activation domain interacting protein, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00004031, pis-1, PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_5269_0_1, dd_Smed_v6_5269_0_1, [RH, Score=238, Expect=5e-64]} {RNA1509_6159} {RNA1310_800.1, RNA1509_6159} {RNA1509_6159, RNA815_1449} |
| 6. | MligTC455_18715 | 178 | 3.71 | Mlig455_053389 | Neo: - Age: logFC(26M/2M)=0.210 |
NLE1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_053389 {REF} {Length: 3868} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=172.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=66.4]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=30.9]; Variant SH3 domain [PF14604.8, score=30.2]; SH3 domain [PF00018.30, score=29.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=24.9]} {Human: ENSG00000073536, NLE1, notchless homolog 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000020692, Nle1, notchless homolog 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0021874, Nle, Notchless, [RH, Score=487, Expect=6e-164]} {Celegans: WBGene00021074, W07E6.2, [RH, Score=506, Expect=1e-171]} {Smed: dd_Smed_v6_10113_0_1, dd_Smed_v6_10113_0_1, [RH, Score=415, Expect=2e-135]} {RNA1509_10089, RNA1509_59623} {RNA1310_18226.1, RNA1509_59623} {RNA1509_59623, RNA815_6966} |
| 7. | MligTC455_16865 | 17 | 0.34 | Mlig455_008424 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_008424 {REF} {Length: 1486} {RNA1310_38108} | |
| 8. | MligTC455_53150 | 224 | 4.67 | Mlig455_036588 | Neo: Int S/G2/M Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_036588 {REF} {Length: 1437} {RNA1509_20954} {RNA1310_9776.1} {RNA815_6133.1} |
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