Data search
Results for MligTC455_39759
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39759 | 837 | 17.45 | Mlig455_027339 | Neo: - Age: - |
WWP1 | Mlig455_027339 {REF} {Length: 4595} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=338.3]; WW domain [PF00397.28, score=158.9]; C2 domain [PF00168.32, score=31.9]} {Human: ENSG00000123124, WWP1, WW domain containing E3 ubiquitin protein ligase 1, [RH, Score=818, Expect=0.0]; ENSG00000198373, WWP2, WW domain containing E3 ubiquitin protein ligase 2, [RH, Score=812, Expect=0.0]; ENSG00000078747, ITCH, itchy E3 ubiquitin protein ligase, [RH, Score=789, Expect=0.0]} {Mouse: ENSMUSG00000041058, Wwp1, WW domain containing E3 ubiquitin protein ligase 1, [RH, Score=841, Expect=0.0]; ENSMUSG00000031930, Wwp2, WW domain containing E3 ubiquitin protein ligase 2, [RH, Score=812, Expect=0.0]} {Dmel: FBgn0003557, Su(dx), Suppressor of deltex, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [RH, Score=784, Expect=0.0]} {Smed: dd_Smed_v6_1444_0_1, dd_Smed_v6_1444_0_1, [RH, Score=778, Expect=0.0]} {RNA1509_36809} {RNA1310_8177, RNA1509_36809} {RNA1509_36809, RNA815_2686} |
Cumulative graph for MligTC455_39759
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.191 | 4.337 | 0.84086 | 1.00000 | |
| RegionR2 | -0.111 | 4.337 | 0.80478 | 1.00000 | |
| RegionR3 | -0.072 | 4.337 | 0.84907 | 1.00000 | |
| RegionR4 | 0.798 | 4.337 | 0.06286 | 0.22520 | |
| RegionR5 | 0.265 | 4.337 | 0.45082 | 0.81259 | |
| RegionR6 | 0.424 | 4.337 | 0.25292 | 0.83871 | |
| RegionR7 | -0.528 | 4.337 | 0.29798 | 0.93278 | |
| RegionR8 | -0.586 | 4.337 | 0.35021 | 0.98353 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.508 | 4.337 | 0.66118 | 1.00000 | |
| RegenerationR2 | 0.003 | 4.337 | 0.99475 | 1.00000 | |
| RegenerationR3 | 0.291 | 4.337 | 0.51037 | 0.86149 | |
| RegenerationR4 | -0.087 | 4.337 | 0.84124 | 1.00000 | |
| RegenerationR5 | 0.269 | 4.337 | 0.51665 | 0.86775 | |
| RegenerationR6 | -0.211 | 4.337 | 0.63050 | 0.88691 | |
| RegenerationBL | -0.073 | 4.337 | 0.88896 | 1.00000 | |
| RegenerationTP | 0.44 | 4.337 | 0.43335 | 0.85551 |
Genes with expression patterns similar to MligTC455_39759
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39759 | 837 | 17.45 | Mlig455_027339 | Neo: - Age: - |
WWP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027339 {REF} {Length: 4595} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=338.3]; WW domain [PF00397.28, score=158.9]; C2 domain [PF00168.32, score=31.9]} {Human: ENSG00000123124, WWP1, WW domain containing E3 ubiquitin protein ligase 1, [RH, Score=818, Expect=0.0]; ENSG00000198373, WWP2, WW domain containing E3 ubiquitin protein ligase 2, [RH, Score=812, Expect=0.0]; ENSG00000078747, ITCH, itchy E3 ubiquitin protein ligase, [RH, Score=789, Expect=0.0]} {Mouse: ENSMUSG00000041058, Wwp1, WW domain containing E3 ubiquitin protein ligase 1, [RH, Score=841, Expect=0.0]; ENSMUSG00000031930, Wwp2, WW domain containing E3 ubiquitin protein ligase 2, [RH, Score=812, Expect=0.0]} {Dmel: FBgn0003557, Su(dx), Suppressor of deltex, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [RH, Score=784, Expect=0.0]} {Smed: dd_Smed_v6_1444_0_1, dd_Smed_v6_1444_0_1, [RH, Score=778, Expect=0.0]} {RNA1509_36809} {RNA1310_8177, RNA1509_36809} {RNA1509_36809, RNA815_2686} |
| 2. | MligTC455_24935 | 6035 | 125.72 | Mlig455_015323, Mlig455_068751 | Neo: - Age: Down-Down-Up |
1.666 | 0.711 | - | - | 0.955 | - | - | Mlig455_015323 {REF} {Length: 551} {TRANSSPLICED} {RNA1509_3000} {RNA1310_51909} {RNA815_32762} Mlig455_068751 {REF} {Length: 541} {TRANSSPLICED} {RNA1509_3000} {RNA1310_51909} {RNA815_32762} |
|
| 3. | MligTC455_24934 | 2988 | 62.24 | Mlig455_015365 | Neo: - Age: - Region-enriched R4: 1.005/0.00499 |
1.661 | 0.704 | - | - | 0.957 | - | - | Mlig455_015365 {REF} {Length: 552} {TRANSSPLICED} {RNA1509_3000, RNA1509_41093, RNA1509_49745} {RNA1310_51909, RNA1509_3000, RNA1509_41093, RNA1509_49745} {RNA1509_3000, RNA1509_41093, RNA1509_49745, RNA815_32762} | |
| 4. | MligTC455_43217 | 2452 | 51.09 | Mlig455_033309 | Neo: - Age: - |
0.973 | - | - | - | 0.973 | - | - | Mlig455_033309 {REF} {Length: 579} {TRANSSPLICED} {Pfam: COMM domain [PF07258.16, score=40.0]} {Smed: dd_Smed_v6_3552_0_1, dd_Smed_v6_3552_0_1, [RH, Score=55.1, Expect=8e-12]} {RNA1509_10026, RNA1509_17279, RNA1509_32823} {RNA1310_62531, RNA1509_10026, RNA1509_17279, RNA1509_32823} {RNA1509_10026, RNA1509_17279, RNA1509_32823, RNA815_13373.1} | |
| 5. | MligTC455_33004 | 291 | 6.07 | Mlig455_035954, Mlig455_058423 | Neo: - Age: Down-Up-Up Region-enriched R8: 3.765/0.00001 |
LRP12 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_035954 {REF} {Length: 2125} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=47.4, Expect=1e-05]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]} {RNA1509_18736} {RNA1310_23783.1} {RNA815_18491} Mlig455_058423 {REF} {Length: 1426} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=37.1]} {Human: ENSG00000147650, LRP12, LDL receptor related protein 12, [Score=49.3, Expect=3e-06]; ENSG00000171208, NETO2, neuropilin and tolloid like 2, [Score=48.5, Expect=6e-06]} {Mouse: ENSMUSG00000022305, Lrp12, low density lipoprotein-related protein 12, [Score=49.7, Expect=2e-06]; ENSMUSG00000036902, Neto2, neuropilin (NRP) and tolloid (TLL)-like 2, [Score=48.5, Expect=4e-06]} {RNA1310_23783.1} {RNA815_18491} |
| 6. | MligTC455_36354 | 1957 | 40.77 | Mlig455_071037 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=3.138 Region-enriched R4: 1.487/0.00000 |
0.955 | - | - | - | 0.955 | - | - | Mlig455_071037 {REF} {Length: 1187} {NoTransDecoderORF} {RNA1509_38393, RNA1509_3853} {RNA1310_33074, RNA1509_38393} {RNA1509_38393, RNA815_19364} | |
| 7. | MligTC455_37098 | 996 | 20.75 | Mlig455_012279 | Neo: Neoblast Age: Up-Down-Up, logFC(26M/2M)=0.528 Region-enriched R4: 1.139/0.02113 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_012279 {REF} {Length: 197} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15555} {RNA1310_36361.1} {RNA815_342.1} |
Berezikov Lab - 2020-2021 © ERIBA