Data search
Results for MligTC455_39868
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39868 | 288 | 6.01 | Mlig455_046351 | Neo: - Age: Down-Up-Down |
CSRP2 | Mlig455_046351 {REF} {Length: 1965} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=156, Expect=4e-48]; ENSG00000159176, CSRP1, cysteine and glycine rich protein 1, [RH, Score=155, Expect=5e-48]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=150, Expect=8e-46]} {Mouse: ENSMUSG00000026421, Csrp1, cysteine and glycine-rich protein 1, [RH, Score=154, Expect=9e-48]; ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=154, Expect=1e-47]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=149, Expect=1e-45]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=124, Expect=1e-33]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=87.4, Expect=9e-23]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=103, Expect=5e-28]} {RNA1509_22484} {RNA1310_29364} {RNA815_18492.2} |
Cumulative graph for MligTC455_39868
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.409 | 3.014 | 0.36112 | 1.00000 | |
| RegionR2 | 0.948 | 3.014 | 0.17122 | 0.51748 | |
| RegionR3 | -0.445 | 3.014 | 0.44161 | 0.95709 | |
| RegionR4 | -0.792 | 3.014 | 0.24962 | 0.54885 | |
| RegionR5 | -1.2 | 3.014 | 0.04039 | 0.16056 | |
| RegionR6 | 0.764 | 3.014 | 0.14181 | 0.67497 | |
| RegionR7 | 1.681 | 3.014 | 0.00194 | 0.05538 | |
| RegionR8 | 0.453 | 3.014 | 0.56747 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.373 | 3.014 | 0.46158 | 1.00000 | |
| RegenerationR2 | -0.856 | 3.014 | 0.15816 | 0.59475 | |
| RegenerationR3 | 0.532 | 3.014 | 0.44036 | 0.82746 | |
| RegenerationR4 | -0.235 | 3.014 | 0.73917 | 0.96738 | |
| RegenerationR5 | -0.249 | 3.014 | 0.71317 | 0.95693 | |
| RegenerationR6 | -0.506 | 3.014 | 0.45291 | 0.77273 | |
| RegenerationBL | -2.165 | 3.014 | 0.02652 | 0.17962 | |
| RegenerationTP | -1.057 | 3.014 | 0.19075 | 0.62962 |
Genes with expression patterns similar to MligTC455_39868
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39868 | 288 | 6.01 | Mlig455_046351 | Neo: - Age: Down-Up-Down |
CSRP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046351 {REF} {Length: 1965} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=156, Expect=4e-48]; ENSG00000159176, CSRP1, cysteine and glycine rich protein 1, [RH, Score=155, Expect=5e-48]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=150, Expect=8e-46]} {Mouse: ENSMUSG00000026421, Csrp1, cysteine and glycine-rich protein 1, [RH, Score=154, Expect=9e-48]; ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=154, Expect=1e-47]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=149, Expect=1e-45]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=124, Expect=1e-33]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=87.4, Expect=9e-23]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=103, Expect=5e-28]} {RNA1509_22484} {RNA1310_29364} {RNA815_18492.2} |
| 2. | MligTC455_09783 | 54 | 1.12 | Mlig455_022995 | Neo: - Age: - Region-enriched R3: 5.206/0.00082 |
0.972 | - | - | - | - | 0.972 | - | Mlig455_022995 {REF} {Length: 829} {RNA1509_29350} {RNA1310_47923} {RNA815_6756.1} | |
| 3. | MligTC455_46350 | 13 | 0.27 | Mlig455_061472 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_061472 {REF} {Length: 1078} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57330} {RNA1310_11978} {RNA815_19911} | |
| 4. | MligTC455_33082 | 27 | 0.56 | Mlig455_069152 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_069152 {REF} {Length: 1903} {NoTransDecoderORF} {RNA1310_61807} {RNA815_46200} | |
| 5. | MligTC455_30795 | 267 | 5.55 | Mlig455_038560, Mlig455_052196 | Neo: - Age: Down-Up-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_038560 {REF} {Length: 898} {NoTransDecoderORF} {RNA1509_51837} {RNA1310_28092} {RNA815_16672} Mlig455_052196 {REF} {Length: 891} {RNA1509_51837} {RNA1310_28092} {RNA815_16672} |
|
| 6. | MligTC455_04533 | 6 | 0.12 | Mlig455_061121 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_061121 {REF} {Length: 633} {NoTransDecoderORF} {RNA1310_60460} | |
| 7. | MligTC455_30796 | 133 | 2.77 | Mlig455_053456 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_053456 {REF} {Length: 2288} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.0]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=60.1, Expect=5e-11]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_6291.1} |
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