Data search


search
Exact
Search

Results for MligTC455_39892

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39892 67 1.40 Mlig455_068952

Neo: -

Age: Down-Down-Up

Region-enriched R2: 4.407/0.01615

HIRA Mlig455_068952 {REF} {Length: 4123} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=91.6]; WD domain, G-beta repeat [PF00400.34, score=63.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [Score=447, Expect=8e-140]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=427, Expect=1e-132]} {Dmel: FBgn0022786, Hira, [RH, Score=364, Expect=6e-109]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=216, Expect=9e-58]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=293, Expect=1e-83]} {RNA1509_21457} {RNA1310_15050} {RNA815_26394}

Cumulative graph for MligTC455_39892

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.535 1.623 0.19390 0.82791
RegionR2 4.407 1.623 0.00065 0.01615
RegionR3 -0.912 1.623 0.31779 0.85594
RegionR4 -4.044 1.623 0.01049 0.06327
RegionR5 -2.228 1.623 0.00259 0.02122
RegionR6 -1.11 1.623 0.14854 0.68744
RegionR7 2.702 1.623 0.02288 0.28237
RegionR8 3.719 1.623 0.00984 0.18671

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.522 1.623 0.81289 1.00000
RegenerationR2 -2.618 1.623 0.01272 0.18345
RegenerationR3 0.338 1.623 0.74105 0.96124
RegenerationR4 -0.428 1.623 0.39188 0.80826
RegenerationR5 -2.871 1.623 0.01573 0.21767
RegenerationR6 -0.355 1.623 0.39709 0.73541
RegenerationBL -6.584 1.623 0.00331 0.05001
RegenerationTP -5.174 1.623 0.01886 0.23524


Genes with expression patterns similar to MligTC455_39892

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39892 67 1.4 Mlig455_068952

Neo: -

Age: Down-Down-Up

Region-enriched R2: 4.407/0.01615

HIRA 3 1.000 1.000 - - 1.000 - Mlig455_068952 {REF} {Length: 4123} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=91.6]; WD domain, G-beta repeat [PF00400.34, score=63.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [Score=447, Expect=8e-140]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=427, Expect=1e-132]} {Dmel: FBgn0022786, Hira, [RH, Score=364, Expect=6e-109]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=216, Expect=9e-58]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=293, Expect=1e-83]} {RNA1509_21457} {RNA1310_15050} {RNA815_26394}
2. MligTC455_08901 10 0.21 Mlig455_032672

Neo: -

Age: -

0.987 - - - - 0.987 - Mlig455_032672 {REF} {Length: 689} {RNA1310_21670}
3. MligTC455_42159 22 0.47 Mlig455_053152

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_053152 {REF} {Length: 451} {NoTransDecoderORF} {RNA1509_6161} {RNA1310_119994} {RNA815_33418}
4. MligTC455_42158 23 0.49 Mlig455_051891

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_051891 {REF} {Length: 348} {NoTransDecoderORF} {RNA1509_6161} {RNA1310_119994} {RNA815_33418}
5. MligTC455_40512 82 1.71 Mlig455_019137

Neo: -

Age: -

0.966 - - - - 0.966 - Mlig455_019137 {REF} {Length: 1341} {Smed: dd_Smed_v6_30766_0_1, dd_Smed_v6_30766_0_1, [Score=70.9, Expect=1e-14]} {RNA1509_43127} {RNA1310_25840, RNA1509_43127} {RNA1509_43127, RNA815_22201}
6. MligTC455_27954 21 0.44 Mlig455_068215

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.483

PLG 0.956 - - - - 0.956 - Mlig455_068215 {REF} {Length: 21001} {Pfam: F5/8 type C domain [PF00754.27, score=52.0]; Kringle domain [PF00051.20, score=50.4]; Lectin C-type domain [PF00059.23, score=48.7]} {Human: ENSG00000122194, PLG, plasminogen, [Score=70.9, Expect=4e-11]} {Mouse: ENSMUSG00000059481, Plg, plasminogen, [Score=67.4, Expect=3e-10]} {Dmel: FBgn0020391, Nrk, Neurospecific receptor kinase, [Score=55.5, Expect=9e-07]} {Smed: dd_Smed_v6_13385_0_1, dd_Smed_v6_13385_0_1, [Score=62.8, Expect=4e-09]} {RNA1509_24904, RNA1509_50163} {RNA1310_75.1, RNA1509_24904, RNA1509_50163} {RNA1509_24904, RNA1509_50163, RNA815_12}
7. MligTC455_33697 164 3.42 Mlig455_003757, Mlig455_003917

Neo: -

Age: -

HNRNPLL 0.951 - - - - 0.951 -

Mlig455_003757 {REF} {Length: 2618} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=106.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=83.2]; Protein of unknown function (DUF4523) [PF15023.8, score=19.3]} {Human: ENSG00000143889, HNRNPLL, heterogeneous nuclear ribonucleoprotein L like, [Score=166, Expect=4e-44]} {Mouse: ENSMUSG00000024095, Hnrnpll, heterogeneous nuclear ribonucleoprotein L-like, [Score=167, Expect=5e-44]} {Dmel: FBgn0003435, sm, smooth, [Score=146, Expect=1e-37]} {Celegans: WBGene00016624, C44B7.2, [Score=174, Expect=8e-47]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=166, Expect=3e-44]} {RNA1509_16405} {RNA1310_13427} {RNA815_7500.1}

Mlig455_003917 {REF} {Length: 2960} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=116.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=86.9]} {Human: ENSG00000143889, HNRNPLL, heterogeneous nuclear ribonucleoprotein L like, [Score=178, Expect=5e-48]} {Mouse: ENSMUSG00000024095, Hnrnpll, heterogeneous nuclear ribonucleoprotein L-like, [Score=178, Expect=5e-48]} {Dmel: FBgn0003435, sm, smooth, [Score=145, Expect=3e-37]} {Celegans: WBGene00016624, C44B7.2, [Score=179, Expect=2e-48]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=174, Expect=3e-47]} {RNA1509_16405} {RNA1310_13427} {RNA815_7500.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA