Data search
Results for MligTC455_39931
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39931 | 2129 | 44.35 | Mlig455_057608, Mlig455_070796 | Neo: - Age: logFC(26M/2M)=0.516 |
Mlig455_057608 {REF} {Length: 897} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=62.7]} {RNA1509_30405, RNA1509_41544} {RNA1310_39155, RNA1509_30405, RNA1509_41544} {RNA1509_30405, RNA1509_41544, RNA815_18135} Mlig455_070796 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=62.7]} {RNA1509_41544} {RNA1310_39155} {RNA815_18135} |
Cumulative graph for MligTC455_39931
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.648 | 5.613 | 0.38980 | 1.00000 | |
| RegionR2 | -0.484 | 5.613 | 0.25738 | 0.63774 | |
| RegionR3 | 0.113 | 5.613 | 0.74589 | 1.00000 | |
| RegionR4 | 0.698 | 5.613 | 0.07774 | 0.25972 | |
| RegionR5 | 0.716 | 5.613 | 0.02457 | 0.11232 | |
| RegionR6 | 0.457 | 5.613 | 0.17844 | 0.74098 | |
| RegionR7 | 0.094 | 5.613 | 0.81202 | 1.00000 | |
| RegionR8 | -0.945 | 5.613 | 0.07538 | 0.52354 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.245 | 5.613 | 0.15318 | 0.89533 | |
| RegenerationR2 | 0.294 | 5.613 | 0.46082 | 0.85273 | |
| RegenerationR3 | -0.008 | 5.613 | 0.98502 | 1.00000 | |
| RegenerationR4 | -0.186 | 5.613 | 0.66287 | 0.93900 | |
| RegenerationR5 | -0.069 | 5.613 | 0.86280 | 1.00000 | |
| RegenerationR6 | -0.447 | 5.613 | 0.29203 | 0.64247 | |
| RegenerationBL | -1.003 | 5.613 | 0.03516 | 0.21110 | |
| RegenerationTP | -0.217 | 5.613 | 0.66136 | 0.99434 |
Genes with expression patterns similar to MligTC455_39931
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39931 | 2129 | 44.35 | Mlig455_057608, Mlig455_070796 | Neo: - Age: logFC(26M/2M)=0.516 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057608 {REF} {Length: 897} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=62.7]} {RNA1509_30405, RNA1509_41544} {RNA1310_39155, RNA1509_30405, RNA1509_41544} {RNA1509_30405, RNA1509_41544, RNA815_18135} Mlig455_070796 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=62.7]} {RNA1509_41544} {RNA1310_39155} {RNA815_18135} |
|
| 2. | MligTC455_07316 | 373 | 7.77 | Mlig455_000488 | Neo: Irradiation Age: Down-Up-Down |
SIN3A | 1.791 | - | - | - | - | 0.832 | 0.959 | Mlig455_000488 {REF} {Length: 4419} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=95.9]; Paired amphipathic helix repeat [PF02671.23, score=90.8]; Sin3 family co-repressor [PF08295.14, score=90.8]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=299, Expect=2e-83]} {Mouse: ENSMUSG00000042557, Sin3a, transcriptional regulator, SIN3A (yeast), [Score=338, Expect=5e-97]} {Dmel: FBgn0022764, Sin3A, [Score=250, Expect=3e-67]} {Celegans: WBGene00004117, sin-3, Paired amphipathic helix protein sin-3, [Score=110, Expect=5e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=211, Expect=2e-55]} {RNA1509_41252, RNA1509_4899} {RNA1310_4266.2, RNA1509_41252, RNA1509_4899} {RNA1509_41252, RNA1509_4899, RNA815_1997} |
| 3. | MligTC455_23620 | 579 | 12.06 | Mlig455_015298 | Neo: - Age: Up-Down-Down |
SFMBT2 | 1.752 | - | - | - | 0.800 | - | 0.952 | Mlig455_015298 {REF} {Length: 5445} {Pfam: mbt repeat [PF02820.20, score=112.7]; SLED domain [PF12140.10, score=85.5]} {Human: ENSG00000198879, SFMBT2, Scm like with four mbt domains 2, [RH, Score=313, Expect=1e-91]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [RH, Score=268, Expect=2e-75]} {Dmel: FBgn0032475, Sfmbt, Scm-related gene containing four mbt domains, [Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_4835_0_1, dd_Smed_v6_4835_0_1, [Score=203, Expect=4e-54]} {RNA1509_11523} {RNA1310_4982.2, RNA1509_11523} {RNA1509_11523, RNA815_1974} |
| 4. | MligTC455_18387 | 478 | 9.97 | Mlig455_014154 | Neo: - Age: - |
1.727 | - | - | - | 0.965 | - | 0.762 | Mlig455_014154 {REF} {Length: 467} {RNA1509_30691} {RNA1310_44953.2, RNA1509_30691} {RNA1509_30691, RNA815_13902.1} | |
| 5. | MligTC455_44489 | 1921 | 40.02 | Mlig455_045166 | Neo: - Age: - |
RNF185 | 1.681 | 0.720 | - | - | 0.961 | - | - | Mlig455_045166 {REF} {Length: 858} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=39.1]; RING-type zinc-finger [PF13445.8, score=37.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.6]; zinc-RING finger domain [PF14634.8, score=30.4]; Prokaryotic RING finger family 4 [PF14447.8, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.6]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [Score=107, Expect=3e-29]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [Score=108, Expect=7e-30]} {Dmel: FBgn0030693, CG8974, [Score=103, Expect=3e-27]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [Score=97.8, Expect=1e-25]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [Score=111, Expect=4e-31]} {RNA1509_43096, RNA1509_8515} {RNA1310_30338, RNA1509_43096, RNA1509_8515} {RNA1509_43096, RNA1509_8515, RNA815_12479} |
| 6. | MligTC455_17554 | 661 | 13.77 | Mlig455_040414 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.377/0.00030 |
NUTF2 | 0.975 | - | - | - | - | 0.975 | - | Mlig455_040414 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=91.1]; Domain of unknown function (DUF4440) [PF14534.8, score=22.8]} {Human: ENSG00000102898, NUTF2, nuclear transport factor 2, [Score=91.3, Expect=4e-24]} {Mouse: ENSMUSG00000008450, Nutf2, nuclear transport factor 2, [Score=91.3, Expect=2e-24]; ENSMUSG00000071497, Nutf2-ps1, nuclear transport factor 2, pseudogene 1, [Score=91.3, Expect=2e-24]} {Dmel: FBgn0032680, Ntf-2r, Nuclear transport factor-2-related, [Score=91.3, Expect=2e-24]} {Celegans: WBGene00004305, ran-4, Probable nuclear transport factor 2, [RH, Score=71.6, Expect=5e-17]} {Smed: dd_Smed_v6_1606_0_1, dd_Smed_v6_1606_0_1, [Score=122, Expect=3e-37]} {RNA1509_29030, RNA1509_44731, RNA1509_47306, RNA1509_51895, RNA1509_59165} {RNA1310_67578.2, RNA1509_44731, RNA1509_47306, RNA1509_51895, RNA1509_59165} {RNA1509_44731, RNA1509_47306, RNA1509_51895, RNA1509_59165, RNA815_35528} |
| 7. | MligTC455_13766 | 1529 | 31.85 | Mlig455_010826 | Neo: - Age: - Region-enriched R4: 1.778/0.00054 |
0.957 | 0.957 | - | - | - | - | - | Mlig455_010826 {REF} {Length: 2035} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=46.6]} {RNA1509_22845} {RNA1310_11632} {RNA815_10000} | |
| 8. | MligTC455_42776 | 2864 | 59.67 | Mlig455_057271, Mlig455_059627 | Neo: - Age: - Region-enriched R5: 1.036/0.00387 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_057271 {REF} {Length: 709} {TRANSSPLICED} {Pfam: Plants and Prokaryotes Conserved (PCC) domain [PF03479.17, score=89.5]} {Smed: dd_Smed_v6_6261_0_1, dd_Smed_v6_6261_0_1, [RH, Score=127, Expect=8e-35]} {RNA1509_6685} {RNA1310_48234} {RNA815_22580.1} Mlig455_059627 {REF} {Length: 1104} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=34.7} {Pfam: Plants and Prokaryotes Conserved (PCC) domain [PF03479.17, score=89.5]} {Smed: dd_Smed_v6_6261_0_1, dd_Smed_v6_6261_0_1, [RH, Score=127, Expect=8e-35]} {RNA1509_6685} {RNA1310_48234, RNA1509_6685} {RNA1509_6685, RNA815_22580.1} |
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