TomoSeq data search

Data search

Results for MligTC455_39942

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39942	299	6.24	Mlig455_009124	Neo: - Age: Down-Up-Up Region-enriched R5: 2.012/0.00420		Mlig455_009124 {REF} {Length: 807} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1075) [PF06388.13, score=32.2]} {RNA1509_48321} {RNA1310_50377} {RNA815_33371}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_39942

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.111	3.173	0.03561	0.46846
RegionR2	0.718	3.173	0.44270	0.83185
RegionR3	0.805	3.173	0.34082	0.87771
RegionR4	1.821	3.173	0.01278	0.07317
RegionR5	2.012	3.173	0.00032	0.00420
RegionR6	1.487	3.173	0.03378	0.34242
RegionR7	1.066	3.173	0.23927	0.86354
RegionR8	-0.799	3.173	0.97860	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.685	3.173	0.24081	0.96582
RegenerationR2	-0.561	3.173	0.20646	0.65370
RegenerationR3	-0.133	3.173	0.78542	0.97744
RegenerationR4	-0.427	3.173	0.39003	0.80737
RegenerationR5	-0.56	3.173	0.17781	0.60676
RegenerationR6	-0.143	3.173	0.76504	0.95875
RegenerationBL	-1.521	3.173	0.08373	0.33895
RegenerationTP	0.175	3.173	0.82323	1.00000

Genes with expression patterns similar to MligTC455_39942

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39942	299	6.24	Mlig455_009124	Neo: - Age: Down-Up-Up Region-enriched R5: 2.012/0.00420		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009124 {REF} {Length: 807} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1075) [PF06388.13, score=32.2]} {RNA1509_48321} {RNA1310_50377} {RNA815_33371}
2.	MligTC455_27770	1266	26.38	Mlig455_010018, Mlig455_010060	Neo: - Age: Up-Down-Down		1.811	-	-	-	-	0.962	0.849	Mlig455_010018 {REF} {Length: 619} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_134190} {RNA815_62379} Mlig455_010060 {REF} {Length: 1317} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_120490} {RNA815_62379}
3.	MligTC455_35075	716	14.92	Mlig455_040773	Neo: Int S/G2/M Age: -	BRAP	0.958	-	-	-	-	-	0.958	Mlig455_040773 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: BRCA1-associated protein 2 [PF07576.14, score=86.0]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=68.9]; Ring finger domain [PF13639.8, score=34.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.5]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.9]; zinc-RING finger domain [PF14634.8, score=23.0]; RING-like zinc finger [PF17123.7, score=21.5]; RING-H2 zinc finger domain [PF12678.9, score=21.4]} {Human: ENSG00000089234, BRAP, BRCA1 associated protein, [RH, Score=382, Expect=5e-126]} {Mouse: ENSMUSG00000029458, Brap, BRCA1 associated protein, [RH, Score=380, Expect=2e-125]} {Dmel: FBgn0038686, CG5555, [RH, Score=374, Expect=2e-123]} {Celegans: WBGene00017144, brap-2, BRCA1-associated protein homolog 2, [RH, Score=322, Expect=6e-103]} {Smed: dd_Smed_v6_4083_0_20, dd_Smed_v6_4083_0_20, [RH, Score=184, Expect=4e-54]} {RNA1509_7342} {RNA1310_14469} {RNA815_2066}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39942

299

6.24

Mlig455_009124

Neo: -

Age: Down-Up-Up

Region-enriched R5: 2.012/0.00420

1.000

Mlig455_009124 {REF} {Length: 807} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1075) [PF06388.13, score=32.2]} {RNA1509_48321} {RNA1310_50377} {RNA815_33371}

MligTC455_27770

1266

26.38

Mlig455_010018, Mlig455_010060

Neo: -

Age: Up-Down-Down

1.811

0.962

0.849

Mlig455_010018 {REF} {Length: 619} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_134190} {RNA815_62379}

Mlig455_010060 {REF} {Length: 1317} {NoTransDecoderORF} {RNA1509_10541} {RNA1310_120490} {RNA815_62379}

MligTC455_35075

716

14.92

Mlig455_040773

Neo: Int S/G2/M

Age: -

BRAP

0.958

Mlig455_040773 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: BRCA1-associated protein 2 [PF07576.14, score=86.0]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=68.9]; Ring finger domain [PF13639.8, score=34.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.5]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.9]; zinc-RING finger domain [PF14634.8, score=23.0]; RING-like zinc finger [PF17123.7, score=21.5]; RING-H2 zinc finger domain [PF12678.9, score=21.4]} {Human: ENSG00000089234, BRAP, BRCA1 associated protein, [RH, Score=382, Expect=5e-126]} {Mouse: ENSMUSG00000029458, Brap, BRCA1 associated protein, [RH, Score=380, Expect=2e-125]} {Dmel: FBgn0038686, CG5555, [RH, Score=374, Expect=2e-123]} {Celegans: WBGene00017144, brap-2, BRCA1-associated protein homolog 2, [RH, Score=322, Expect=6e-103]} {Smed: dd_Smed_v6_4083_0_20, dd_Smed_v6_4083_0_20, [RH, Score=184, Expect=4e-54]} {RNA1509_7342} {RNA1310_14469} {RNA815_2066}