M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_39944

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39944 23 0.48 Mlig455_055773

Neo: -

Age: Down-Down-Up

 Mlig455_055773 {REF} {Length: 2281} {NoTransDecoderORF} {RNA1509_41798} {RNA1310_21073.1} {RNA815_8731.1}

Cumulative graph for MligTC455_39944

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.084 1.049 0.99976 1.00000
RegionR2 1.908 1.049 0.66207 0.99341
RegionR3 -0.47 1.049 0.98202 1.00000
RegionR4 -1.067 1.049 0.89427 1.00000
RegionR5 0.166 1.049 0.99033 1.00000
RegionR6 -0.259 1.049 0.97790 1.00000
RegionR7 0.68 1.049 0.85205 1.00000
RegionR8 -1.042 1.049 0.99987 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.911 1.049 0.99983 1.00000
RegenerationR2 2.503 1.049 0.03792 0.32147
RegenerationR3 4.117 1.049 0.07793 0.46127
RegenerationR4 4.66 1.049 0.10638 0.50338
RegenerationR5 4.05 1.049 0.02133 0.25267
RegenerationR6 4.905 1.049 0.01424 0.14689
RegenerationBL 2.942 1.049 0.34563 0.71285
RegenerationTP 1.435 1.049 0.62236 0.97366


Genes with expression patterns similar to MligTC455_39944

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39944 23 0.48 Mlig455_055773

Neo: -

Age: Down-Down-Up

 3 1.000 - - - 1.000 1.000 Mlig455_055773 {REF} {Length: 2281} {NoTransDecoderORF} {RNA1509_41798} {RNA1310_21073.1} {RNA815_8731.1}
2. MligTC455_07074 6 0.13 Mlig455_048695

Neo: -

Age: -

 FCN1 1.881 - - - - 0.957 0.924 Mlig455_048695 {REF} {Length: 1171} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=172.4]} {Human: ENSG00000085265, FCN1, ficolin 1, [RH, Score=144, Expect=7e-40]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=135, Expect=1e-36]} {Dmel: FBgn0033312, CG8642, [Score=111, Expect=2e-27]} {Celegans: WBGene00017013, ensh-1, [Score=52.8, Expect=2e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=104, Expect=9e-25]} {RNA1310_44670.1} {RNA815_23388}
3. MligTC455_31681 13 0.28 Mlig455_041756

Neo: Germline

Age: Down-Up-Down

 PIF1 1.798 0.832 - - - - 0.966 Mlig455_041756 {REF} {Length: 4303} {Pfam: PIF1-like helicase [PF05970.16, score=333.6]; AAA domain [PF13604.8, score=46.2]; Helicase [PF02689.16, score=24.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=1e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.0, Expect=1e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=87.0, Expect=3e-17]} {Celegans: WBGene00019136, F59H6.5, [Score=493, Expect=7e-155]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=107, Expect=5e-24]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}
4. MligTC455_35982 1405 29.27 Mlig455_009323, Mlig455_022837, Mlig455_022838, Mlig455_037709, Mlig455_042292, Mlig455_044783, Mlig455_052915, Mlig455_054665, Mlig455_055175, Mlig455_061419, Mlig455_063453, Mlig455_070549

Neo: Germline

Age: logFC(26M/2M)=0.698

Region-enriched R5: 4.319/0.01846

 1.684 0.734 - - - - 0.950

Mlig455_009323 {REF} {Length: 486} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_022837 {REF} {Length: 1215} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=67.0]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=45.0]} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_022838 {REF} {Length: 1533} {Pfam: RNase H [PF00075.26, score=49.9]; Reverse transcriptase-like [PF13456.8, score=22.0]} {RNA1509_53488} {RNA1310_43206} {RNA815_37912}

Mlig455_037709 {REF} {Length: 1046} {RNA1509_30354} {RNA1310_37492} {RNA815_48050.1}

Mlig455_042292 {REF} {Length: 1640} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_37492} {RNA815_48050.1}

Mlig455_044783 {REF} {Length: 488} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_052915 {REF} {Length: 373} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_054665 {REF} {Length: 485} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_055175 {REF} {Length: 491} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965, RNA1509_18260} {RNA1310_91224.1, RNA1509_18260} {RNA1509_18260, RNA815_48050.1}

Mlig455_061419 {REF} {Length: 441} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_063453 {REF} {Length: 458} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}

Mlig455_070549 {REF} {Length: 511} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1}
5. MligTC455_50136 49 1.02 Mlig455_009182, Mlig455_058062

Neo: -

Age: -

 0.991 - - - - 0.991 -

Mlig455_009182 {REF} {Length: 1530} {NoTransDecoderORF} {RNA1509_26806} {RNA1310_16674} {RNA815_34661}

Mlig455_058062 {REF} {Length: 4383} {NoTransDecoderORF} {RNA1509_26806} {RNA1310_16674} {RNA815_34661}
6. MligTC455_04154 8 0.16 Mlig455_065272

Neo: -

Age: -

 0.986 - - - - - 0.986 Mlig455_065272 {REF} {Length: 2413} {RNA1509_33387} {RNA1310_38614} {RNA815_2054.1}
7. MligTC455_26062 38 0.78 Mlig455_043265

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_043265 {REF} {Length: 938} {RNA1509_2412} {RNA1310_50443} {RNA815_8781.1}
8. MligTC455_15538 12 0.26 Mlig455_047069

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_047069 {REF} {Length: 1453} {tRNA: Val(CAC),pseudo, score=38.2} {RNA1509_21228} {RNA1310_9066} {RNA815_6917.1}
9. MligTC455_26060 41 0.85 Mlig455_043264

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_043264 {REF} {Length: 3805} {TRANSSPLICED} {RNA1509_37190} {RNA1310_8858} {RNA815_11278}
10. MligTC455_07324 33 0.69 Mlig455_027151

Neo: -

Age: Up-Down-Down

 0.981 - - - - 0.981 - Mlig455_027151 {REF} {Length: 4978} {RNA1509_58516} {RNA1310_40818} {RNA815_42071}
11. MligTC455_26910 47 0.98 Mlig455_035560

Neo: -

Age: Down-Up-Up

Region-enriched R5: 3.334/0.00824

 0.977 - - - - - 0.977 Mlig455_035560 {REF} {Length: 2416} {Pfam: Fibronectin type III domain [PF00041.23, score=69.1]} {RNA1509_34253} {RNA1310_14514} {RNA815_6401.1}
12. MligTC455_26912 47 0.98 Mlig455_035582

Neo: Irradiation

Age: -

Region-enriched R5: 3.329/0.00846

 0.977 - - - - - 0.977 Mlig455_035582 {REF} {Length: 1346} {RNA1509_34253} {RNA1310_42580} {RNA815_5738.1}
13. MligTC455_04091 15 0.32 Mlig455_056004, Mlig455_056100

Neo: -

Age: logFC(26M/2M)=-0.262

 WDR26 0.975 - - - - 0.975 -

Mlig455_056004 {REF} {Length: 3020} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=71.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.7]; LisH-like dimerisation domain [PF17814.3, score=30.8]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [Score=399, Expect=3e-130]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [Score=410, Expect=5e-135]} {Dmel: FBgn0037094, CG7611, [RH, Score=385, Expect=9e-126]} {Celegans: WBGene00021482, Y39H10A.6, [RH, Score=144, Expect=6e-36]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [Score=213, Expect=1e-59]} {RNA1509_11125} {RNA1310_10156.1, RNA1509_11125} {RNA1509_11125, RNA815_3618}

Mlig455_056100 {REF} {Length: 2664} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=71.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]; LisH-like dimerisation domain [PF17814.3, score=30.8]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [Score=400, Expect=2e-130]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [Score=410, Expect=6e-135]} {Dmel: FBgn0037094, CG7611, [RH, Score=386, Expect=8e-126]} {Celegans: WBGene00021482, Y39H10A.6, [RH, Score=144, Expect=6e-36]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [Score=213, Expect=1e-59]} {RNA1509_11125} {RNA1310_10156.1} {RNA815_3618}
14. MligTC455_04606 6 0.13 Mlig455_070410

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_070410 {REF} {Length: 979} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.2} {RNA815_32063.1}
15. MligTC455_48586 54 1.12 Mlig455_061016, Mlig455_061623

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 5.192/0.02665

 0.974 - - - - 0.974 -

Mlig455_061016 {REF} {Length: 3775} {RNA1509_51986} {RNA1310_27843} {RNA815_37393}

Mlig455_061623 {REF} {Length: 4648} {RNA1509_34275} {RNA1310_27843} {RNA815_37393}
16. MligTC455_11387 14 0.29 Mlig455_030326

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_030326 {REF} {Length: 829} {NoTransDecoderORF} {RNA1509_23562} {RNA1310_94583} {RNA815_47071}
17. MligTC455_25545 54 1.12 Mlig455_019588

Neo: -

Age: -

 CDKL1 0.972 - - - - 0.972 - Mlig455_019588 {REF} {Length: 3818} {Pfam: Protein kinase domain [PF00069.27, score=190.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=84.6]; Haspin like kinase domain [PF12330.10, score=18.1]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [Score=330, Expect=5e-112]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [Score=329, Expect=2e-111]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [Score=337, Expect=3e-115]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [Score=328, Expect=1e-111]} {Dmel: FBgn0031730, CG7236, [Score=293, Expect=3e-97]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=288, Expect=4e-96]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [Score=366, Expect=2e-126]} {RNA1509_25889} {RNA1310_19262, RNA1509_25889} {RNA1509_25889, RNA815_26580}
18. MligTC455_18046 5 0.1 Mlig455_062964

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_062964 {REF} {Length: 1136} {NoTransDecoderORF} {RNA1310_47473}
19. MligTC455_21248 3 0.06 Mlig455_047818

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_047818 {REF} {Length: 1782} {Pfam: SAP domain [PF02037.29, score=33.1]} {RNA1310_3424.1} {RNA815_45872}
20. MligTC455_29866 70 1.46 Mlig455_008787, Mlig455_068946

Neo: Irradiation

Age: Up-Down-Down

 MSH6 0.967 - - - - - 0.967

Mlig455_008787 {REF} {Length: 10819} {TRANSSPLICED} {Pfam: MutS domain I [PF01624.22, score=121.8]; MutS domain III [PF05192.20, score=79.3]; PWWP domain [PF00855.19, score=51.3]; MutS domain II [PF05188.19, score=27.8]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=544, Expect=2e-177]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=563, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [Score=417, Expect=2e-128]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=409, Expect=2e-125]} {Smed: dd_Smed_v6_15463_0_2, dd_Smed_v6_15463_0_2, [Score=466, Expect=8e-150]} {RNA1509_2552, RNA1509_40096} {RNA1310_55.1, RNA1509_40096} {RNA1509_40096, RNA815_1085}

Mlig455_068946 {REF} {Length: 697} {Pfam: Integrase core domain [PF00665.28, score=38.6]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=126, Expect=2e-34]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}
21. MligTC455_00777 5 0.1 Mlig455_069992

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_069992 {REF} {Length: 486} {NoTransDecoderORF}
22. MligTC455_14667 6 0.12 Mlig455_023220

Neo: -

Age: -

 PIK3CA 0.965 - - - - 0.965 - Mlig455_023220 {REF} {Length: 1002} {Human: ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=114, Expect=7e-28]} {Dmel: FBgn0015279, Pi3K92E, [Score=94.7, Expect=2e-21]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [Score=69.7, Expect=4e-13]} {Smed: dd_Smed_v6_8025_0_1, dd_Smed_v6_8025_0_1, [Score=108, Expect=3e-26]} {RNA1509_9204} {RNA1310_64803} {RNA815_1006}
23. MligTC455_22960 20 0.41 Mlig455_034116

Neo: -

Age: Up-Down-Down

 FCHO2 0.965 - - - - - 0.965 Mlig455_034116 {REF} {Length: 4524} {Pfam: Muniscin C-terminal mu homology domain [PF10291.11, score=52.6]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=27.0]} {Human: ENSG00000157107, FCHO2, FCH domain only 2, [Score=160, Expect=5e-40]} {Mouse: ENSMUSG00000041685, Fcho2, FCH domain only 2, [Score=182, Expect=3e-47]} {Dmel: FBgn0037702, CG8176, [RH, Score=142, Expect=2e-34]} {Smed: dd_Smed_v6_8587_0_1, dd_Smed_v6_8587_0_1, [Score=137, Expect=4e-33]} {RNA1509_17297} {RNA1310_3291.1} {RNA815_19798}
24. MligTC455_30134 29 0.61 Mlig455_045836

Neo: -

Age: Up-Down-Up

 0.965 - - - - 0.965 - Mlig455_045836 {REF} {Length: 1500} {NoTransDecoderORF} {RNA1509_55535} {RNA1310_52881} {RNA815_11436}
25. MligTC455_35500 5 0.1 Mlig455_041081

Neo: -

Age: -

 HACE1 0.965 - - - - 0.965 - Mlig455_041081 {REF} {Length: 1129} {Pfam: Ankyrin repeat [PF00023.32, score=76.5]; Ankyrin repeats (3 copies) [PF12796.9, score=72.7]; Ankyrin repeats (many copies) [PF13637.8, score=68.8]; Ankyrin repeats (many copies) [PF13857.8, score=59.6]; Ankyrin repeat [PF13606.8, score=43.3]} {Human: ENSG00000085382, HACE1, HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, [Score=77.4, Expect=4e-15]} {Mouse: ENSMUSG00000038822, Hace1, HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1, [Score=77.0, Expect=4e-15]; ENSMUSG00000015468, Notch4, notch 4, [Score=73.6, Expect=6e-14]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=61.2, Expect=5e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.8, Expect=6e-10]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_43154} {RNA1310_25352} {RNA815_10888}
26. MligTC455_52654 10 0.2 Mlig455_050086

Neo: -

Age: -

 P2RX4 0.965 - - - - 0.965 - Mlig455_050086 {REF} {Length: 2788} {Pfam: ATP P2X receptor [PF00864.21, score=433.9]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=331, Expect=2e-108]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=310, Expect=2e-100]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [RH, Score=417, Expect=3e-141]} {RNA1310_41878} {RNA815_49663}
27. MligTC455_57625 7 0.15 Mlig455_022152

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_022152 {REF} {Length: 124} {NoTransDecoderORF} {RNA1310_129674}
28. MligTC455_07663 214 4.46 Mlig455_040788, Mlig455_040842

Neo: Germline

Age: -

 0.964 - - - - 0.964 -

Mlig455_040788 {REF} {Length: 598} {RNA1509_46159} {RNA1310_67983} {RNA815_26425}

Mlig455_040842 {REF} {Length: 493} {RNA1509_46159} {RNA1310_67983} {RNA815_26425}
29. MligTC455_10965 7 0.15 Mlig455_035576

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_035576 {REF} {Length: 874} {NoTransDecoderORF} {RNA1509_40609} {RNA1310_141932} {RNA815_62663}
30. MligTC455_14947 28 0.58 Mlig455_014053

Neo: -

Age: Down-Down-Up

 0.964 - - - - - 0.964 Mlig455_014053 {REF} {Length: 2383} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=53.3]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=147, Expect=2e-41]} {RNA1509_19126, RNA1509_19514, RNA1509_41226} {RNA1310_8869.1, RNA1509_19126, RNA1509_19514, RNA1509_41226} {RNA1509_19126, RNA1509_19514, RNA1509_41226, RNA815_3347.1}
31. MligTC455_08703 3 0.06 Mlig455_013792

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_013792 {REF} {Length: 500} {NoTransDecoderORF}
32. MligTC455_37036 15 0.31 Mlig455_069299

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_069299 {REF} {Length: 1653} {RNA1509_6226} {RNA1310_93425} {RNA815_25475}
33. MligTC455_49886 37 0.76 Mlig455_063134

Neo: Int S/G2/M

Age: -

 0.963 - - - - 0.963 - Mlig455_063134 {REF} {Length: 439} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56631} {RNA1310_23778} {RNA815_50068}
34. MligTC455_08701 18 0.37 Mlig455_054805

Neo: -

Age: Down-Up-Down

 SLC5A12 0.962 - - - - 0.962 - Mlig455_054805 {REF} {Length: 2561} {Pfam: Sodium:solute symporter family [PF00474.19, score=101.1]} {Human: ENSG00000148942, SLC5A12, solute carrier family 5 member 12, [Score=302, Expect=4e-94]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=300, Expect=1e-93]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=300, Expect=1e-93]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=308, Expect=1e-96]} {Dmel: FBgn0017448, CG2187, [Score=265, Expect=3e-80]} {Celegans: WBGene00014092, ZK822.5, [Score=190, Expect=9e-53]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=272, Expect=2e-83]} {RNA1509_38187} {RNA1310_11800.1} {RNA815_9373}
35. MligTC455_29823 228 4.76 Mlig455_061840

Neo: -

Age: Up-Down-Down

 PLAGL2 0.962 - - - - 0.962 - Mlig455_061840 {REF} {Length: 6005} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.7]; Zinc finger, C2H2 type [PF00096.28, score=25.4]} {Human: ENSG00000126003, PLAGL2, PLAG1 like zinc finger 2, [Score=61.2, Expect=7e-09]; ENSG00000198816, ZNF358, zinc finger protein 358, [Score=60.8, Expect=1e-08]} {Mouse: ENSMUSG00000070495, Ctcfl, CCCTC-binding factor (zinc finger protein)-like, [Score=63.2, Expect=1e-09]; ENSMUSG00000051413, Plagl2, pleiomorphic adenoma gene-like 2, [Score=60.5, Expect=7e-09]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=60.5, Expect=9e-09]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=52.4, Expect=1e-06]} {Smed: dd_Smed_v6_11201_0_1, dd_Smed_v6_11201_0_1, [RH, Score=72.0, Expect=1e-12]} {RNA1509_11247} {RNA1310_3056.1} {RNA815_16992}
36. MligTC455_36276 11 0.23 Mlig455_008174, Mlig455_069596

Neo: -

Age: -

 TNKS 0.962 - - - - - 0.962

Mlig455_008174 {REF} {Length: 3526} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.0]; Ankyrin repeats (many copies) [PF13637.8, score=41.1]; Ankyrin repeat [PF00023.32, score=37.0]; Ankyrin repeat [PF13606.8, score=36.7]; Ankyrin repeats (many copies) [PF13857.8, score=26.0]; Mab-21 protein [PF03281.16, score=21.3]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=62.4, Expect=5e-09]; ENSG00000285372, AC270292.3, tankyrase, [Score=62.0, Expect=6e-09]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=62.0, Expect=6e-09]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=62.4, Expect=3e-09]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=60.8, Expect=4e-09]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=54.7, Expect=3e-07]} {RNA1310_61630} {RNA815_31743}

Mlig455_069596 {REF} {Length: 3865} {Pfam: Mab-21 protein [PF03281.16, score=25.9]; Ankyrin repeat [PF00023.32, score=20.8]; Ankyrin repeats (3 copies) [PF12796.9, score=19.8]; Ankyrin repeat [PF13606.8, score=18.9]} {RNA1509_19198} {RNA1310_61630} {RNA815_31743}
37. MligTC455_45251 109 2.27 Mlig455_012833

Neo: -

Age: Down-Down-Up

 0.962 - - - - 0.962 - Mlig455_012833 {REF} {Length: 2880} {RNA1509_8813} {RNA1310_16550} {RNA815_17676}
38. MligTC455_49927 107 2.23 Mlig455_050188, Mlig455_066986

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_050188 {REF} {Length: 514} {NoTransDecoderORF} {RNA1310_81595} {RNA815_44778}

Mlig455_066986 {REF} {Length: 536} {NoTransDecoderORF} {RNA1310_81595} {RNA815_44778}
39. MligTC455_52261 7 0.15 Mlig455_054544

Neo: -

Age: -

 DHX9 0.962 - - - - 0.962 - Mlig455_054544 {REF} {Length: 4773} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=73.2]; Helicase conserved C-terminal domain [PF00271.33, score=52.9]; Helicase associated domain (HA2) [PF04408.25, score=50.3]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.1]; DEAD/DEAH box helicase [PF00270.31, score=29.8]} {Human: ENSG00000135829, DHX9, DExH-box helicase 9, [RH, Score=1135, Expect=0.0]} {Mouse: ENSMUSG00000042699, Dhx9, DEAH (Asp-Glu-Ala-His) box polypeptide 9, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0002774, mle, maleless, [RH, Score=1055, Expect=0.0]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [RH, Score=867, Expect=0.0]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [RH, Score=1117, Expect=0.0]} {RNA1509_8352} {RNA1310_2204.1, RNA1509_8352} {RNA1509_8352, RNA815_3757}
40. MligTC455_01170 6 0.12 Mlig455_036842

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_036842 {REF} {Length: 534} {NoTransDecoderORF} {RNA1509_48610} {RNA1310_35022.3} {RNA815_52076}
41. MligTC455_39876 129 2.69 Mlig455_006058

Neo: -

Age: -

Region-enriched R2: 3.934/0.04615

 NOC3L 0.96 - - - - 0.960 - Mlig455_006058 {REF} {Length: 3753} {TRANSSPLICED} {Pfam: Nucleolar complex-associated protein [PF07540.13, score=78.7]} {Human: ENSG00000173145, NOC3L, NOC3 like DNA replication regulator, [RH, Score=204, Expect=2e-55]} {Mouse: ENSMUSG00000024999, Noc3l, NOC3 like DNA replication regulator, [RH, Score=200, Expect=4e-54]} {Dmel: FBgn0037489, CG1234, [RH, Score=159, Expect=2e-40]} {Celegans: WBGene00016508, C37H5.5, Nucleolar complex protein 3 homolog, [RH, Score=139, Expect=4e-34]} {Smed: dd_Smed_v6_13062_0_1, dd_Smed_v6_13062_0_1, [RH, Score=99.0, Expect=1e-21]} {RNA1509_7132} {RNA1310_9494, RNA1509_7132} {RNA1509_7132, RNA815_11181}
42. MligTC455_54158 22 0.46 Mlig455_011244

Neo: -

Age: Down-Up-Down

 PI4K2A 0.959 - - - - - 0.959 Mlig455_011244 {REF} {Length: 2057} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=176.8]} {Human: ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [Score=350, Expect=2e-114]; ENSG00000281028, AC104662.2, phosphatidylinositol 4-kinase type 2 beta, [Score=348, Expect=5e-115]} {Mouse: ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [Score=352, Expect=4e-115]} {Dmel: FBgn0037339, Pi4KIIalpha, [RH, Score=500, Expect=8e-170]} {Celegans: WBGene00022501, ZC8.6, [RH, Score=414, Expect=7e-138]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [Score=317, Expect=4e-102]} {RNA1509_4690} {RNA1310_13340.1, RNA1509_4690} {RNA1509_4690, RNA815_4434}
43. MligTC455_06037 3 0.07 Mlig455_003435

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_003435 {REF} {Length: 1038} {NoTransDecoderORF} {RNA1509_59020} {RNA1310_2822} {RNA815_47488}
44. MligTC455_12485 15 0.31 Mlig455_040727

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_040727 {REF} {Length: 784} {NoTransDecoderORF}
45. MligTC455_03366 17 0.36 Mlig455_003556

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_003556 {REF} {Length: 767} {NoTransDecoderORF} {RNA1310_111532}
46. MligTC455_30161 42 0.88 Mlig455_056962

Neo: -

Age: Up-Down-Up

 0.957 - - - - 0.957 - Mlig455_056962 {REF} {Length: 3436} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_49065} {RNA1310_3906.1} {RNA815_1664.1}
47. MligTC455_11089 25 0.53 Mlig455_019885

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_019885 {REF} {Length: 726} {RNA1310_46030.2} {RNA815_34666}
48. MligTC455_25228 3 0.06 Mlig455_016055

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_016055 {REF} {Length: 2135} {Pfam: Fibronectin type III domain [PF00041.23, score=57.9]; Protein of unknown function (DUF2722) [PF10846.10, score=24.1]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=89.0, Expect=5e-18]} {Smed: dd_Smed_v6_1916_0_1, dd_Smed_v6_1916_0_1, [Score=137, Expect=2e-33]} {RNA1310_17213} {RNA815_44978}
49. MligTC455_27960 159 3.31 Mlig455_067489

Neo: -

Age: logFC(26M/2M)=0.290

 SLC6A1 0.956 - - - - 0.956 - Mlig455_067489 {REF} {Length: 2366} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=125.6]} {Human: ENSG00000157103, SLC6A1, solute carrier family 6 member 1, [Score=105, Expect=3e-23]} {Mouse: ENSMUSG00000030310, Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1, [Score=103, Expect=1e-22]} {Dmel: FBgn0011603, ine, inebriated, [Score=118, Expect=2e-27]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=80.5, Expect=1e-15]} {Smed: dd_Smed_v6_7447_0_1, dd_Smed_v6_7447_0_1, [RH, Score=426, Expect=2e-142]} {RNA1509_1953} {RNA1310_10042.2} {RNA815_3754.1}
50. MligTC455_28962 77 1.61 Mlig455_049735, Mlig455_056147

Neo: -

Age: -

 0.956 - - - - 0.956 -

Mlig455_049735 {REF} {Length: 5656} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497}

Mlig455_056147 {REF} {Length: 1708} {TRANSSPLICED} {RNA1310_30688} {RNA815_22497}
51. MligTC455_29459 22 0.46 Mlig455_071162

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_071162 {REF} {Length: 7047} {Pfam: RNase H [PF00075.26, score=34.0]} {RNA1509_57754} {RNA1310_1659, RNA1509_57754} {RNA1509_57754, RNA815_252.1}
52. MligTC455_35114 8 0.18 Mlig455_047765

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_047765 {REF} {Length: 1009} {NoTransDecoderORF} {RNA1509_53291} {RNA1310_58974} {RNA815_43288.3}
53. MligTC455_50252 17 0.36 Mlig455_000663

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_000663 {REF} {Length: 743} {NoTransDecoderORF} {RNA1310_149491}
54. MligTC455_53664 95 1.98 Mlig455_009492

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_009492 {REF} {Length: 6572} {RNA1509_42922} {RNA1310_48548} {RNA815_18455}
55. MligTC455_56847 10 0.21 Mlig455_015505

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_015505 {REF} {Length: 658} {NoTransDecoderORF} {RNA1310_111532}
56. MligTC455_00506 5 0.09 Mlig455_051012

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_051012 {REF} {Length: 981} {NoTransDecoderORF} {RNA1310_58286.1}
57. MligTC455_06413 6 0.11 Mlig455_041505

Neo: -

Age: -

 HAND2 0.955 - - - - - 0.955 Mlig455_041505 {REF} {Length: 898} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=46.3]} {Human: ENSG00000164107, HAND2, heart and neural crest derivatives expressed 2, [Score=60.1, Expect=6e-11]; ENSG00000113196, HAND1, heart and neural crest derivatives expressed 1, [Score=59.7, Expect=1e-10]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=57.4, Expect=2e-09]} {Mouse: ENSMUSG00000037335, Hand1, heart and neural crest derivatives expressed 1, [Score=60.5, Expect=4e-11]; ENSMUSG00000038193, Hand2, heart and neural crest derivatives expressed 2, [Score=60.1, Expect=6e-11]} {Dmel: FBgn0032209, Hand, [Score=65.5, Expect=3e-13]} {Celegans: WBGene00003018, lin-32, [Score=47.8, Expect=4e-07]} {Smed: dd_Smed_v6_13704_0_1, dd_Smed_v6_13704_0_1, [Score=54.7, Expect=3e-09]}
58. MligTC455_12008 7 0.14 Mlig455_052000

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_052000 {REF} {Length: 580} {NoTransDecoderORF} {RNA1310_25697}
59. MligTC455_37867 4 0.09 Mlig455_019305, Mlig455_019524

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_019305 {REF} {Length: 2156} {RNA1310_66110} {RNA815_13789}

Mlig455_019524 {REF} {Length: 2354} {RNA1310_66110} {RNA815_13789}
60. MligTC455_15347 29 0.61 Mlig455_013884, Mlig455_059961

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_013884 {REF} {Length: 496} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_76296} {RNA815_39565.1}

Mlig455_059961 {REF} {Length: 177} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_76296} {RNA815_39565.1}
61. MligTC455_09693 14 0.29 Mlig455_009097

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_009097 {REF} {Length: 674} {NoTransDecoderORF} {RNA1310_130042}
62. MligTC455_37030 44 0.92 Mlig455_069657

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_069657 {REF} {Length: 5025} {Pfam: CD80-like C2-set immunoglobulin domain [PF08205.14, score=26.1]} {RNA1509_36341} {RNA1310_8709} {RNA815_721.1}
63. MligTC455_07975 81 1.68 Mlig455_011195, Mlig455_011223, Mlig455_024741, Mlig455_024746

Neo: -

Age: -

Region-enriched R8: 4.742/0.01108

 SLC17A6 0.952 - - - - 0.952 -

Mlig455_011195 {REF} {Length: 1492} {Pfam: Major Facilitator Superfamily [PF07690.18, score=82.6]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=199, Expect=6e-57]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=198, Expect=6e-57]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=185, Expect=9e-52]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=154, Expect=3e-41]} {Smed: dd_Smed_v6_21295_0_1, dd_Smed_v6_21295_0_1, [Score=467, Expect=5e-162]} {RNA1310_54177} {RNA815_35434}

Mlig455_011223 {REF} {Length: 2089} {Pfam: Major Facilitator Superfamily [PF07690.18, score=106.1]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=257, Expect=4e-78]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=256, Expect=5e-78]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=224, Expect=1e-65]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=209, Expect=9e-61]} {Smed: dd_Smed_v6_15146_0_1, dd_Smed_v6_15146_0_1, [Score=568, Expect=0.0]} {RNA1509_10221} {RNA1310_54177} {RNA815_35434}

Mlig455_024741 {REF} {Length: 1475} {Pfam: Major Facilitator Superfamily [PF07690.18, score=84.6]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=224, Expect=2e-66]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=199, Expect=2e-56]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=188, Expect=4e-53]} {Smed: dd_Smed_v6_21295_0_1, dd_Smed_v6_21295_0_1, [Score=509, Expect=3e-178]} {RNA1310_66074} {RNA815_35434}

Mlig455_024746 {REF} {Length: 1607} {Pfam: Major Facilitator Superfamily [PF07690.18, score=59.1]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=202, Expect=6e-58]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=202, Expect=6e-58]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=172, Expect=8e-47]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=159, Expect=1e-42]} {Smed: dd_Smed_v6_15146_0_1, dd_Smed_v6_15146_0_1, [Score=442, Expect=6e-152]} {RNA1310_54177} {RNA815_35434}
64. MligTC455_14941 37 0.78 Mlig455_045502

Neo: -

Age: Up-Up-Down

 0.952 - - - - - 0.952 Mlig455_045502 {REF} {Length: 5086} {RNA1509_39915, RNA1509_47199} {RNA1310_14234, RNA1509_39915, RNA1509_47199} {RNA1509_39915, RNA1509_47199, RNA815_21867}
65. MligTC455_31271 3 0.06 Mlig455_070817

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_070817 {REF} {Length: 2012} {Pfam: RNase H [PF00075.26, score=39.6]} {RNA1509_18232} {RNA1310_1081} {RNA815_9914}
66. MligTC455_37993 5 0.11 Mlig455_014151

Neo: -

Age: logFC(26M/2M)=-0.305

 0.952 - - - - 0.952 - Mlig455_014151 {REF} {Length: 2067} {Pfam: Wax ester synthase-like Acyl-CoA acyltransferase domain [PF03007.18, score=43.9]; Condensation domain [PF00668.22, score=21.0]} {Smed: dd_Smed_v6_7004_0_1, dd_Smed_v6_7004_0_1, [Score=49.7, Expect=2e-06]} {RNA1509_4720} {RNA1310_6102} {RNA815_886.1}
67. MligTC455_01750 5 0.1 Mlig455_063966

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_063966 {REF} {Length: 374} {NoTransDecoderORF}
68. MligTC455_08545 5 0.1 Mlig455_070448

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_070448 {REF} {Length: 204} {NoTransDecoderORF} {RNA1310_19915.1}
69. MligTC455_08930 12 0.24 Mlig455_010075

Neo: -

Age: -

 OVOL1 0.951 - - - - 0.951 - Mlig455_010075 {REF} {Length: 1933} {Pfam: Zinc-finger double domain [PF13465.8, score=54.3]; Zinc finger, C2H2 type [PF00096.28, score=41.2]; C2H2-type zinc finger [PF13894.8, score=34.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.3]; zinc-finger C2H2-type [PF16622.7, score=21.7]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=186, Expect=4e-56]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=179, Expect=1e-53]; ENSMUSG00000037279, Ovol2, ovo like zinc finger 2, [RH, Score=175, Expect=6e-52]} {Dmel: FBgn0003028, ovo, [Score=194, Expect=2e-54]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [RH, Score=204, Expect=4e-63]} {Smed: dd_Smed_v6_10673_0_1, dd_Smed_v6_10673_0_1, [RH, Score=185, Expect=3e-56]} {RNA1509_24345} {RNA1310_10860.2} {RNA815_21019}
70. MligTC455_57717 4 0.08 Mlig455_017606

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_017606 {REF} {Length: 251} {NoTransDecoderORF}
71. MligTC455_01757 9 0.19 Mlig455_051452

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_051452 {REF} {Length: 298} {NoTransDecoderORF} {RNA1310_58092} {RNA815_50705}
72. MligTC455_18217 90 1.88 Mlig455_020744, Mlig455_036071

Neo: Germline

Age: logFC(26M/2M)=0.551

Region-enriched R5: 4.938/0.00000

 0.95 - - - - - 0.950

Mlig455_020744 {REF} {Length: 517} {RNA1509_51447} {RNA1310_30965, RNA1509_51447} {RNA1509_51447, RNA815_50212}

Mlig455_036071 {REF} {Length: 742} {RNA1509_51447} {RNA1310_30965} {RNA815_50212}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA