Data search
Results for MligTC455_39946
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39946 | 904 | 18.83 | Mlig455_023605, Mlig455_068096 | Neo: - Age: - |
Mlig455_023605 {REF} {Length: 1909} {RNA1509_34056} {RNA1310_31132} {RNA815_26562} Mlig455_068096 {REF} {Length: 1907} {RNA1509_34056, RNA1509_34312} {RNA1310_31132, RNA1509_34056, RNA1509_34312} {RNA1509_34056, RNA1509_34312, RNA815_26562} |
Cumulative graph for MligTC455_39946
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.459 | 4.567 | 0.61302 | 1.00000 | |
| RegionR2 | -0.946 | 4.567 | 0.01884 | 0.14745 | |
| RegionR3 | 0.342 | 4.567 | 0.26059 | 0.80438 | |
| RegionR4 | 0.782 | 4.567 | 0.03799 | 0.16007 | |
| RegionR5 | 0.845 | 4.567 | 0.00234 | 0.01963 | |
| RegionR6 | 0.612 | 4.567 | 0.04459 | 0.39439 | |
| RegionR7 | -0.018 | 4.567 | 0.96333 | 1.00000 | |
| RegionR8 | -1.158 | 4.567 | 0.03093 | 0.34384 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.228 | 4.567 | 0.06292 | 0.73772 | |
| RegenerationR2 | 0.269 | 4.567 | 0.43521 | 0.83736 | |
| RegenerationR3 | -0.717 | 4.567 | 0.04333 | 0.36385 | |
| RegenerationR4 | -0.48 | 4.567 | 0.19980 | 0.64594 | |
| RegenerationR5 | -0.517 | 4.567 | 0.11486 | 0.51036 | |
| RegenerationR6 | -0.774 | 4.567 | 0.03380 | 0.23015 | |
| RegenerationBL | -0.712 | 4.567 | 0.14890 | 0.46113 | |
| RegenerationTP | 0.707 | 4.567 | 0.12535 | 0.53577 |
Genes with expression patterns similar to MligTC455_39946
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39946 | 904 | 18.83 | Mlig455_023605, Mlig455_068096 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023605 {REF} {Length: 1909} {RNA1509_34056} {RNA1310_31132} {RNA815_26562} Mlig455_068096 {REF} {Length: 1907} {RNA1509_34056, RNA1509_34312} {RNA1310_31132, RNA1509_34056, RNA1509_34312} {RNA1509_34056, RNA1509_34312, RNA815_26562} |
|
| 2. | MligTC455_49013 | 277 | 5.78 | Mlig455_006233 | Neo: - Age: Down-Up-Down |
UBL3 | 1.791 | 0.835 | - | - | 0.956 | - | - | Mlig455_006233 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=87.5]; Ubiquitin family [PF00240.25, score=19.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=150, Expect=2e-47]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=149, Expect=3e-47]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [RH, Score=145, Expect=1e-42]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=7e-31]} {RNA1509_29746} {RNA1310_56429} {RNA815_28925} |
| 3. | MligTC455_49424 | 368 | 7.67 | Mlig455_051752 | Neo: - Age: Down-Up-Down |
PPM1D | 1.694 | - | - | 0.960 | - | 0.734 | - | Mlig455_051752 {REF} {Length: 3711} {Pfam: Protein phosphatase 2C [PF00481.23, score=213.0]} {Human: ENSG00000170836, PPM1D, protein phosphatase, Mg2+/Mn2+ dependent 1D, [RH, Score=270, Expect=5e-82]} {Mouse: ENSMUSG00000020525, Ppm1d, protein phosphatase 1D magnesium-dependent, delta isoform, [RH, Score=268, Expect=2e-81]} {Dmel: FBgn0022768, Pp2C1, Protein phosphatase 2C, [RH, Score=306, Expect=6e-91]} {Celegans: WBGene00021856, Y54F10BM.1, [RH, Score=251, Expect=5e-74]} {Smed: dd_Smed_v6_56771_0_1, dd_Smed_v6_56771_0_1, [RH, Score=376, Expect=4e-127]} {RNA1509_9938} {RNA1310_10931} {RNA815_1300} |
| 4. | MligTC455_50090 | 587 | 12.22 | Mlig455_001439 | Neo: - Age: - |
FDX2 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_001439 {REF} {Length: 2701} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=110.3]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=35.0]} {Human: ENSG00000267673, FDX2, ferredoxin 2, [Score=134, Expect=1e-36]} {Mouse: ENSMUSG00000079677, Fdx1l, ferredoxin 1-like, [Score=131, Expect=8e-36]} {Dmel: FBgn0011769, Fdx1, Ferredoxin 1, [Score=139, Expect=4e-39]} {Celegans: WBGene00013532, Y73F8A.27, [Score=136, Expect=4e-38]} {Smed: dd_Smed_v6_1152_2_6, dd_Smed_v6_1152_2_6, [RH, Score=215, Expect=3e-66]} {RNA1509_1362, RNA1509_24448} {RNA1310_8431, RNA1509_1362} {RNA1509_1362, RNA815_9739.1} |
Berezikov Lab - 2020-2021 © ERIBA