TomoSeq data search

Data search

Results for MligTC455_39953

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39953	373	7.78	Mlig455_040790	Neo: - Age: -	ZNF436	Mlig455_040790 {REF} {Length: 1921} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=121.0]; Zinc-finger double domain [PF13465.8, score=96.8]; C2H2-type zinc finger [PF13894.8, score=87.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=46.5]; C2H2-type zinc finger [PF13912.8, score=35.1]; C2H2-type zinc ribbon [PF15909.7, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=27.7]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.7]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=23.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.0]} {Human: ENSG00000283009, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000125945, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000197372, ZNF675, zinc finger protein 675, [Score=172, Expect=3e-49]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=172, Expect=8e-50]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=172, Expect=1e-49]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=171, Expect=3e-48]; ENSG00000263002, ZNF234, zinc finger protein 234, [Score=170, Expect=6e-48]; ENSG00000188171, ZNF626, zinc finger protein 626, [Score=169, Expect=3e-48]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=168, Expect=2e-47]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=168, Expect=4e-48]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=168, Expect=8e-47]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=167, Expect=4e-48]; ENSG00000166704, ZNF606, zinc finger protein 606, [Score=167, Expect=2e-46]; ENSG00000144026, ZNF514, zinc finger protein 514, [Score=167, Expect=7e-49]} {Mouse: ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=176, Expect=3e-51]; ENSMUSG00000051351, Zfp46, zinc finger protein 46, [Score=173, Expect=8e-51]; ENSMUSG00000078898, Zfp968, zinc finger protein 968, [Score=172, Expect=3e-50]; ENSMUSG00000089756, Zfp966, zinc finger protein 966, [Score=172, Expect=3e-50]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=172, Expect=9e-52]; ENSMUSG00000095199, Zfp967, zinc finger protein 967, [Score=172, Expect=3e-50]; ENSMUSG00000095545, Zfp969, zinc finger protein 969, [Score=172, Expect=3e-50]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=171, Expect=8e-49]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=170, Expect=2e-48]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=170, Expect=2e-48]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=170, Expect=1e-47]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=169, Expect=2e-47]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=169, Expect=3e-49]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=169, Expect=3e-48]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=168, Expect=3e-49]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=168, Expect=6e-49]} {Dmel: FBgn0031610, CG15436, [Score=144, Expect=1e-40]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=123, Expect=2e-31]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=121, Expect=3e-32]} {RNA1509_40050} {RNA1310_35621} {RNA815_29241}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_39953

373

7.78

Mlig455_040790

Neo: -

Age: -

ZNF436

Mlig455_040790 {REF} {Length: 1921} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=121.0]; Zinc-finger double domain [PF13465.8, score=96.8]; C2H2-type zinc finger [PF13894.8, score=87.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=46.5]; C2H2-type zinc finger [PF13912.8, score=35.1]; C2H2-type zinc ribbon [PF15909.7, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=27.7]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.7]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=23.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.0]} {Human: ENSG00000283009, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000125945, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000197372, ZNF675, zinc finger protein 675, [Score=172, Expect=3e-49]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=172, Expect=8e-50]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=172, Expect=1e-49]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=171, Expect=3e-48]; ENSG00000263002, ZNF234, zinc finger protein 234, [Score=170, Expect=6e-48]; ENSG00000188171, ZNF626, zinc finger protein 626, [Score=169, Expect=3e-48]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=168, Expect=2e-47]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=168, Expect=4e-48]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=168, Expect=8e-47]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=167, Expect=4e-48]; ENSG00000166704, ZNF606, zinc finger protein 606, [Score=167, Expect=2e-46]; ENSG00000144026, ZNF514, zinc finger protein 514, [Score=167, Expect=7e-49]} {Mouse: ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=176, Expect=3e-51]; ENSMUSG00000051351, Zfp46, zinc finger protein 46, [Score=173, Expect=8e-51]; ENSMUSG00000078898, Zfp968, zinc finger protein 968, [Score=172, Expect=3e-50]; ENSMUSG00000089756, Zfp966, zinc finger protein 966, [Score=172, Expect=3e-50]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=172, Expect=9e-52]; ENSMUSG00000095199, Zfp967, zinc finger protein 967, [Score=172, Expect=3e-50]; ENSMUSG00000095545, Zfp969, zinc finger protein 969, [Score=172, Expect=3e-50]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=171, Expect=8e-49]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=170, Expect=2e-48]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=170, Expect=2e-48]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=170, Expect=1e-47]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=169, Expect=2e-47]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=169, Expect=3e-49]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=169, Expect=3e-48]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=168, Expect=3e-49]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=168, Expect=6e-49]} {Dmel: FBgn0031610, CG15436, [Score=144, Expect=1e-40]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=123, Expect=2e-31]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=121, Expect=3e-32]} {RNA1509_40050} {RNA1310_35621} {RNA815_29241}

Cumulative graph for MligTC455_39953

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.132	3.393	0.43222	1.00000
RegionR2	0.41	3.393	0.56430	0.92599
RegionR3	0.154	3.393	0.78388	1.00000
RegionR4	1.038	3.393	0.11140	0.33048
RegionR5	0.831	3.393	0.09586	0.29669
RegionR6	0.062	3.393	0.91135	1.00000
RegionR7	-1.015	3.393	0.26519	0.89540
RegionR8	-2.611	3.393	0.05505	0.45814

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.403	3.393	0.57420	1.00000
RegenerationR2	1.048	3.393	0.05798	0.39573
RegenerationR3	1.423	3.393	0.02123	0.26484
RegenerationR4	0.378	3.393	0.54754	0.89159
RegenerationR5	0.473	3.393	0.38783	0.78999
RegenerationR6	1.78	3.393	0.00443	0.08003
RegenerationBL	2.507	3.393	0.00264	0.04331
RegenerationTP	2.114	3.393	0.04522	0.35330

Genes with expression patterns similar to MligTC455_39953

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39953	373	7.78	Mlig455_040790	Neo: - Age: -	ZNF436	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040790 {REF} {Length: 1921} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=121.0]; Zinc-finger double domain [PF13465.8, score=96.8]; C2H2-type zinc finger [PF13894.8, score=87.5]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=46.5]; C2H2-type zinc finger [PF13912.8, score=35.1]; C2H2-type zinc ribbon [PF15909.7, score=31.4]; Zinc-finger of C2H2 type [PF12874.9, score=27.7]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.7]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=23.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.0]} {Human: ENSG00000283009, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000125945, ZNF436, zinc finger protein 436, [Score=175, Expect=4e-51]; ENSG00000197372, ZNF675, zinc finger protein 675, [Score=172, Expect=3e-49]; ENSG00000181450, ZNF678, zinc finger protein 678, [Score=172, Expect=8e-50]; ENSG00000182318, ZSCAN22, zinc finger and SCAN domain containing 22, [Score=172, Expect=1e-49]; ENSG00000198131, ZNF544, zinc finger protein 544, [Score=171, Expect=3e-48]; ENSG00000263002, ZNF234, zinc finger protein 234, [Score=170, Expect=6e-48]; ENSG00000188171, ZNF626, zinc finger protein 626, [Score=169, Expect=3e-48]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=168, Expect=2e-47]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=168, Expect=4e-48]; ENSG00000167380, ZNF226, zinc finger protein 226, [Score=168, Expect=8e-47]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=167, Expect=4e-48]; ENSG00000166704, ZNF606, zinc finger protein 606, [Score=167, Expect=2e-46]; ENSG00000144026, ZNF514, zinc finger protein 514, [Score=167, Expect=7e-49]} {Mouse: ENSMUSG00000078868, Gm14412, predicted gene 14412, [Score=176, Expect=3e-51]; ENSMUSG00000051351, Zfp46, zinc finger protein 46, [Score=173, Expect=8e-51]; ENSMUSG00000078898, Zfp968, zinc finger protein 968, [Score=172, Expect=3e-50]; ENSMUSG00000089756, Zfp966, zinc finger protein 966, [Score=172, Expect=3e-50]; ENSMUSG00000078861, Zfp931, zinc finger protein 931, [Score=172, Expect=9e-52]; ENSMUSG00000095199, Zfp967, zinc finger protein 967, [Score=172, Expect=3e-50]; ENSMUSG00000095545, Zfp969, zinc finger protein 969, [Score=172, Expect=3e-50]; ENSMUSG00000078902, Gm14443, predicted gene 14443, [Score=171, Expect=8e-49]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=170, Expect=2e-48]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=170, Expect=2e-48]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=170, Expect=1e-47]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=169, Expect=2e-47]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=169, Expect=3e-49]; ENSMUSG00000038797, Zscan2, zinc finger and SCAN domain containing 2, [Score=169, Expect=3e-48]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=168, Expect=3e-49]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=168, Expect=6e-49]} {Dmel: FBgn0031610, CG15436, [Score=144, Expect=1e-40]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=123, Expect=2e-31]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=121, Expect=3e-32]} {RNA1509_40050} {RNA1310_35621} {RNA815_29241}
2.	MligTC455_05385	537	11.2	Mlig455_069930	Neo: - Age: -	SMYD4	1.706	-	-	-	0.753	-	0.953	Mlig455_069930 {REF} {Length: 1626} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=39.1]} {Human: ENSG00000186532, SMYD4, SET and MYND domain containing 4, [RH, Score=128, Expect=9e-31]} {Mouse: ENSMUSG00000018809, Smyd4, SET and MYND domain containing 4, [RH, Score=148, Expect=1e-37]} {Dmel: FBgn0033633, Smyd4-3, SET and MYND domain containing, class 4, member 3, [Score=94.0, Expect=6e-20]} {RNA1509_24708, RNA1509_39831} {RNA1310_19741.1, RNA1509_24708, RNA1509_39831} {RNA1509_24708, RNA1509_39831, RNA815_7923}
3.	MligTC455_51340	188	3.92	Mlig455_022752	Neo: - Age: -	NT5DC1	0.958	-	-	0.958	-	-	-	Mlig455_022752 {REF} {Length: 2763} {TRANSSPLICED} {Pfam: 5' nucleotidase family [PF05761.16, score=148.0]} {Human: ENSG00000178425, NT5DC1, 5'-nucleotidase domain containing 1, [RH, Score=152, Expect=7e-41]} {Mouse: ENSMUSG00000039480, Nt5dc1, 5'-nucleotidase domain containing 1, [RH, Score=140, Expect=2e-36]} {Dmel: FBgn0035204, CG2277, [RH, Score=135, Expect=1e-34]} {Celegans: WBGene00022201, Y71H10B.1, [Score=82.0, Expect=1e-16]} {RNA1509_35532} {RNA1310_20365, RNA1509_35532} {RNA1509_35532, RNA815_8202}
4.	MligTC455_20710	600	12.51	Mlig455_032523	Neo: - Age: Up-Down-Down	EPG5	0.951	-	-	-	-	-	0.951	Mlig455_032523 {REF} {Length: 10511} {TRANSSPLICED} {Human: ENSG00000152223, EPG5, ectopic P-granules autophagy protein 5 homolog, [Score=278, Expect=1e-76]} {Mouse: ENSMUSG00000039840, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [Score=271, Expect=2e-74]; ENSMUSG00000116023, Epg5, ectopic P-granules autophagy protein 5 homolog (C. elegans), [Score=271, Expect=2e-74]} {Smed: dd_Smed_v6_3273_0_1, dd_Smed_v6_3273_0_1, [Score=193, Expect=5e-50]} {RNA1509_3973} {RNA1310_276.1} {RNA815_491}