TomoSeq data search

Data search

Results for MligTC455_39986

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39986	7	0.15	Mlig455_034171, Mlig455_040378	Neo: - Age: -	ASIC1	Mlig455_034171 {REF} {Length: 2829} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=87.0]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=52.0, Expect=2e-06]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=111, Expect=2e-25]} {RNA1509_59645} Mlig455_040378 {REF} {Length: 3295} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=50.4, Expect=1e-05]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=120, Expect=2e-28]} {RNA1509_59645}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_39986

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.386	0.582	0.99995	1.00000
RegionR2	-0.075	0.582	0.99998	1.00000
RegionR3	-0.664	0.582	1.00000	1.00000
RegionR4	0.805	0.582	0.99990	1.00000
RegionR5	-0.656	0.582	0.99990	1.00000
RegionR6	-0.596	0.582	0.99998	1.00000
RegionR7	-0.49	0.582	0.99996	1.00000
RegionR8	-0.71	0.582	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.778	0.582	0.99995	1.00000
RegenerationR2	3.17	0.582	0.03002	0.28489
RegenerationR3	2.216	0.582	0.99981	1.00000
RegenerationR4	3.033	0.582	0.99964	1.00000
RegenerationR5	2.573	0.582	0.99966	1.00000
RegenerationR6	1.498	0.582	0.99991	1.00000
RegenerationBL	2.067	0.582	0.99994	1.00000
RegenerationTP	4.303	0.582	0.99951	1.00000

Genes with expression patterns similar to MligTC455_39986

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39986	7	0.15	Mlig455_034171, Mlig455_040378	Neo: - Age: -	ASIC1	1	-	-	-	-	-	1.000	Mlig455_034171 {REF} {Length: 2829} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=87.0]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=52.0, Expect=2e-06]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=111, Expect=2e-25]} {RNA1509_59645} Mlig455_040378 {REF} {Length: 3295} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=108.2]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=50.4, Expect=1e-05]} {Mouse: ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=51.2, Expect=4e-06]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=120, Expect=2e-28]} {RNA1509_59645}
2.	MligTC455_38846	11	0.24	Mlig455_071125	Neo: - Age: Down-Up-Down	SETMAR	0.989	-	-	-	-	-	0.989	Mlig455_071125 {REF} {Length: 2680} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.0]; Transposase (partial DDE domain) [PF01359.20, score=32.8]; HTH domain in Mos1 transposase [PF17906.3, score=29.9]; Homeodomain-like domain [PF13565.8, score=25.1]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=150, Expect=9e-41]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=68.2, Expect=2e-14]} {RNA1509_17190} {RNA1310_25865} {RNA815_362.2}
3.	MligTC455_10201	32	0.66	Mlig455_063510	Neo: - Age: Up-Down-Down Region-enriched R4: 5.161/0.01817		0.964	-	-	-	-	-	0.964	Mlig455_063510 {REF} {Length: 377} {RNA1509_57251} {RNA1310_40651} {RNA815_22600.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39986

0.15

Mlig455_034171, Mlig455_040378

Neo: -

Age: -

ASIC1

1.000

MligTC455_38846

0.24

Mlig455_071125

Neo: -

Age: Down-Up-Down

SETMAR

0.989

Mlig455_071125 {REF} {Length: 2680} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.0]; Transposase (partial DDE domain) [PF01359.20, score=32.8]; HTH domain in Mos1 transposase [PF17906.3, score=29.9]; Homeodomain-like domain [PF13565.8, score=25.1]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=150, Expect=9e-41]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=68.2, Expect=2e-14]} {RNA1509_17190} {RNA1310_25865} {RNA815_362.2}

MligTC455_10201

0.66

Mlig455_063510

Neo: -

Age: Up-Down-Down

Region-enriched R4: 5.161/0.01817

0.964

Mlig455_063510 {REF} {Length: 377} {RNA1509_57251} {RNA1310_40651} {RNA815_22600.1}